CX296277
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296277 vs. ExPASy Swiss-Prot
Match: PTI6_SOLLC (Pathogenesis-related genes transcriptional activator PTI6 OS=Solanum lycopersicum GN=PTI6 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 9.684e-12 Identity = 36/87 (41.38%), Postives = 54/87 (62.07%), Query Frame = 3 Query: 243 ESTPFSDEH--QSLAKIKRPQPP-SYLNSCSASGDEKKPKRQ------RKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEE 476 ++T SD+ ++ ++KR + + S + GD K+ R+ +RG+RQRPWG+WAAEIRDP +G RVWLGT++T EE Sbjct: 46 DATDSSDDEGRNTVRRVKRHVTEINLMPSTKSIGDRKRRSVSPDSDVTRRKKFRGVRQRPWGRWAAEIRDPTRGKRVWLGTYDTPEE 132
BLAST of CX296277 vs. ExPASy Swiss-Prot
Match: ABI4_ARATH (Ethylene-responsive transcription factor ABI4 OS=Arabidopsis thaliana GN=ABI4 PE=1 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 9.684e-12 Identity = 40/94 (42.55%), Postives = 51/94 (54.26%), Query Frame = 3 Query: 207 PFAATKQLPHNFESTPFSDEHQSLAKIKRPQPPSYLNSCSASGDEKKPKR----QRKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEE 476 P A+ Q H D +Q+L PQ S +S ++S K+ + K YRG+RQR WGKW AEIR+PRK R WLGTF TAE+ Sbjct: 3 PLASQHQHNH------LEDNNQTLTH-NNPQSDSTTDSSTSSAQRKRKGKGGPDNSKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFATAED 89
BLAST of CX296277 vs. ExPASy Swiss-Prot
Match: ERF42_ARATH (Ethylene-responsive transcription factor ERF042 OS=Arabidopsis thaliana GN=ERF042 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.265e-11 Identity = 30/56 (53.57%), Postives = 38/56 (67.86%), Query Frame = 3 Query: 306 SYLNSCSASGDEKKPKRQRKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAE 473 S+ + S +KK K + K +YRG R R WGKW +EIR+PRK R+WLGTF TAE Sbjct: 4 SHGSDTECSSKKKKEKTKEKGVYRGARMRSWGKWVSEIREPRKKSRIWLGTFPTAE 59
BLAST of CX296277 vs. ExPASy Swiss-Prot
Match: RAP24_ARATH (Ethylene-responsive transcription factor RAP2-4 OS=Arabidopsis thaliana GN=RAP2-4 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 2.157e-11 Identity = 42/98 (42.86%), Postives = 50/98 (51.02%), Query Frame = 3 Query: 258 SDEHQSLAKIKRPQPPSYLN-----------------------SCSA--SGDEKKPKRQRKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEE 476 S HQ ++I P PP++ N SC A SG KP + LYRG+RQR WGKW AEIR PR R+WLGTF+TAEE Sbjct: 93 SQIHQIQSQIHHPLPPTHHNNNNSFSNLLSPKPLLMKQSGVAGSCFAYGSGVPSKPTK----LYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEE 186
BLAST of CX296277 vs. ExPASy Swiss-Prot
Match: ERF43_ARATH (Ethylene-responsive transcription factor ERF043 OS=Arabidopsis thaliana GN=ERF043 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 2.157e-11 Identity = 27/49 (55.10%), Postives = 38/49 (77.55%), Query Frame = 3 Query: 327 ASGDEKKPKRQRKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAE 473 +S D++K + ++ +YRG+R R WGKW +EIR+PRK R+WLGTF TAE Sbjct: 4 SSSDKEKKENNKQPVYRGVRMRSWGKWVSEIREPRKKSRIWLGTFPTAE 52
BLAST of CX296277 vs. ExPASy Swiss-Prot
Match: EF102_ARATH (Ethylene-responsive transcription factor 5 OS=Arabidopsis thaliana GN=ERF5 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 2.818e-11 Identity = 43/106 (40.57%), Postives = 56/106 (52.83%), Query Frame = 3 Query: 171 SRVTASDLWPNSPFAATKQLPHNFESTPFSDEHQSLAKIKRPQPPSYLNSCSASGDEKKPK---RQRKNLYRGIRQRPWGKWAAEIRDPRK-GVRVWLGTFNTAEE 476 S V+ SD F + Q + FE S + KI P ++ + + + K + K YRG+RQRPWGK+AAEIRDP K G RVWLGTF+TA E Sbjct: 90 SEVSVSDF----DFKPSNQNQNQFEPELKSQIRKPPLKISLPAKTEWIQFAAENTKPEVTKPVSEEEKKHYRGVRQRPWGKFAAEIRDPNKRGSRVWLGTFDTAIE 191
BLAST of CX296277 vs. ExPASy Swiss-Prot
Match: ERF39_ARATH (Ethylene-responsive transcription factor ERF039 OS=Arabidopsis thaliana GN=ERF039 PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 4.806e-11 Identity = 30/72 (41.67%), Postives = 42/72 (58.33%), Query Frame = 3 Query: 258 SDEHQSLAKIKRPQPPSYLNSCSASGDEKKPKRQRKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAE 473 S H+S ++ P P S ++K +Q +RG+R R WGKW +EIR+PRK R+WLGTF+T E Sbjct: 4 SSSHESQRNLRSPVPEKTGKSSKTKNEQKGVSKQPN--FRGVRMRQWGKWVSEIREPRKKSRIWLGTFSTPE 73
BLAST of CX296277 vs. ExPASy Swiss-Prot
Match: EF100_ARATH (Ethylene-responsive transcription factor 1A OS=Arabidopsis thaliana GN=ERF1A PE=1 SV=2) HSP 1 Score: 67.0106 bits (162), Expect = 4.806e-11 Identity = 39/86 (45.35%), Postives = 52/86 (60.47%), Query Frame = 3 Query: 246 STPFSDEHQSL---AKIKRPQPPSYLNSCSASGDEKKP-----KRQRKNLYRGIRQRPWGKWAAEIRDPRK-GVRVWLGTFNTAEE 476 S+ SDE +S KI+ P+ + ++S ++ P + YRG+RQRPWGK+AAEIRDP K G RVWLGTF TAE+ Sbjct: 98 SSSSSDEDRSSFPSVKIETPESFAAVDSVPVKKEKTSPVSAAVTAAKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAED 183
BLAST of CX296277 vs. ExPASy Swiss-Prot
Match: ERF56_ARATH (Ethylene-responsive transcription factor ERF056 OS=Arabidopsis thaliana GN=ERF056 PE=2 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 6.277e-11 Identity = 37/97 (38.14%), Postives = 51/97 (52.58%), Query Frame = 3 Query: 198 PNSPFAATKQLPHNFESTPFSDEHQSLAKIKRPQPPSYLNSCSASGDEKK----PKRQRKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEE 476 PN+ F K +P HQ ++ + S +++ S + K + KNLYRG+RQR WGKW AEIR P+ R+WLGTF TAE+ Sbjct: 11 PNTSFGVNKSMPLGLNQLTPYQIHQIQNQLNHRR--STISNLSPNRIRMKNLTPSTSKTKNLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFETAEK 105
BLAST of CX296277 vs. ExPASy Swiss-Prot
Match: ERF5_TOBAC (Ethylene-responsive transcription factor 5 OS=Nicotiana tabacum GN=ERF5 PE=2 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 8.198e-11 Identity = 31/39 (79.49%), Postives = 34/39 (87.18%), Query Frame = 3 Query: 363 KNLYRGIRQRPWGKWAAEIRDP-RKGVRVWLGTFNTAEE 476 K YRG+RQRPWGK+AAEIRDP RKG RVWLGTF+TA E Sbjct: 142 KKHYRGVRQRPWGKFAAEIRDPNRKGTRVWLGTFDTAIE 180 The following BLAST results are available for this feature:
BLAST of CX296277 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296277 ID=CX296277; Name=CX296277; organism=Citrus clementina; type=EST; length=478bpback to top |