CX296280
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296280 vs. ExPASy Swiss-Prot
Match: DCYD_SALCH (D-cysteine desulfhydrase OS=Salmonella choleraesuis GN=dcyD PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.463e-15 Identity = 52/128 (40.62%), Postives = 70/128 (54.69%), Query Frame = 3 Query: 243 HLTPIPSHVFSLGHFPTPIHKWNLPNLPH--NTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIEL 620 HLT P L PTP+ LP L E+++KRDD++ + + GNK+RKLEFL+ADA+ +GAD +IT G IQSNH R A A L L C +L ++ GN L+ L IE+ Sbjct: 5 HLTRFPR--LELIGAPTPLEY--LPRLSDYLGREIYIKRDDVTPIAMGGNKLRKLEFLVADALREGADTLITAGAIQSNHVRQTAAVAAKLGLHCVALLENPIGTTAENYLTNGNRLLLDLFNTQIEM 128
BLAST of CX296280 vs. ExPASy Swiss-Prot
Match: DCYD_SALA4 (D-cysteine desulfhydrase OS=Salmonella agona (strain SL483) GN=dcyD PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.463e-15 Identity = 52/128 (40.62%), Postives = 70/128 (54.69%), Query Frame = 3 Query: 243 HLTPIPSHVFSLGHFPTPIHKWNLPNLPH--NTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIEL 620 HLT P L PTP+ LP L E+++KRDD++ + + GNK+RKLEFL+ADA+ +GAD +IT G IQSNH R A A L L C +L ++ GN L+ L IE+ Sbjct: 5 HLTRFPR--LELIGAPTPLEY--LPRLSDYLGREIYIKRDDVTPIAMGGNKLRKLEFLVADALREGADTLITAGAIQSNHVRQTAAVAAKLGLHCVALLENPIGTTAENYLTNGNRLLLDLFNTQIEM 128
BLAST of CX296280 vs. ExPASy Swiss-Prot
Match: 1A1D_METNO (1-aminocyclopropane-1-carboxylate deaminase OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=acdS PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.463e-15 Identity = 43/115 (37.39%), Postives = 68/115 (59.13%), Query Frame = 3 Query: 288 PTPIHKWNL--PNLPHNTEVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIELI 623 PTPI + +L E++ KR+D SG+ GNK+RKLE+++ DA+A GAD +++IGG+QSNH R A A + + C L+ D GN+++ R++GA + L+ Sbjct: 14 PTPIERLGRLSAHLGGQVELYAKREDCNSGLAFGGNKLRKLEYIVPDAIASGADTLVSIGGVQSNHTRMVAAVAAKIGMKCRLVQEAWVPHEDAVYDRVGNIMLSRILGADVRLV 128
BLAST of CX296280 vs. ExPASy Swiss-Prot
Match: 1A1D_BURCJ (1-aminocyclopropane-1-carboxylate deaminase OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=acdS PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.463e-15 Identity = 49/131 (37.40%), Postives = 74/131 (56.49%), Query Frame = 3 Query: 243 HLTPIPSHVFSLGHFPTPIH--KWNLPNLPHNTEVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIELIS 626 +L P + + G PTPI K +L E++ KR+D SG+ GNK RKLE+L+ DA+AQGAD +++IGG+QSN R A A +L + C L+ D GN+ + R++GA + L++ Sbjct: 2 NLQRFPRYPLTFG--PTPIQPLKRLSAHLGGKVELYAKREDCNSGLAFGGNKTRKLEYLVPDALAQGADTLVSIGGVQSNQTRQVAAVAAHLGMKCVLVQEHWVNYEDPVYDRVGNIQLSRMMGADVRLVA 130
BLAST of CX296280 vs. ExPASy Swiss-Prot
Match: 1A1D_BURCH (1-aminocyclopropane-1-carboxylate deaminase OS=Burkholderia cenocepacia (strain HI2424) GN=acdS PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.463e-15 Identity = 49/131 (37.40%), Postives = 74/131 (56.49%), Query Frame = 3 Query: 243 HLTPIPSHVFSLGHFPTPIH--KWNLPNLPHNTEVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIELIS 626 +L P + + G PTPI K +L +++ KR+D SG+ GNK RKLE+L+ DA+AQGAD +++IGG+QSN R A A +L + C L+ D GN+ + R++GA + L+S Sbjct: 2 NLQRFPRYPLTFG--PTPIQPLKRLSAHLGGKVDLYAKREDCNSGLAFGGNKTRKLEYLVPDALAQGADTLVSIGGVQSNQTRQVAAVAAHLGMKCVLVQEHWVNYEDPVYDRVGNIQLSRMMGADVRLVS 130
BLAST of CX296280 vs. ExPASy Swiss-Prot
Match: 1A1D_BURCA (1-aminocyclopropane-1-carboxylate deaminase OS=Burkholderia cenocepacia (strain AU 1054) GN=acdS PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.463e-15 Identity = 49/131 (37.40%), Postives = 74/131 (56.49%), Query Frame = 3 Query: 243 HLTPIPSHVFSLGHFPTPIH--KWNLPNLPHNTEVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIELIS 626 +L P + + G PTPI K +L +++ KR+D SG+ GNK RKLE+L+ DA+AQGAD +++IGG+QSN R A A +L + C L+ D GN+ + R++GA + L+S Sbjct: 2 NLQRFPRYPLTFG--PTPIQPLKRLSAHLGGKVDLYAKREDCNSGLAFGGNKTRKLEYLVPDALAQGADTLVSIGGVQSNQTRQVAAVAAHLGMKCVLVQEHWVNYEDPVYDRVGNIQLSRMMGADVRLVS 130
BLAST of CX296280 vs. ExPASy Swiss-Prot
Match: 1A1D_RHIRD (1-aminocyclopropane-1-carboxylate deaminase OS=Rhizobium radiobacter GN=acdS PE=3 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 1.910e-15 Identity = 40/99 (40.40%), Postives = 62/99 (62.63%), Query Frame = 3 Query: 330 NTEVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIELI 623 + E+W KR+D SG+ + GNK+RKLE+++ DA+A AD +++IGG+QSNH R A A L + C L+ + D GN+L+ RL+GA ++ Sbjct: 30 DVEIWAKREDCNSGLAMGGNKLRKLEYIVPDAIASNADTLVSIGGVQSNHTRMVAAVAAKLGMKCRLVQESWVPHEDAVYDRVGNILMTRLMGADSRIV 128
BLAST of CX296280 vs. ExPASy Swiss-Prot
Match: 1A1D_RHILV (1-aminocyclopropane-1-carboxylate deaminase OS=Rhizobium leguminosarum bv. viciae GN=acdS PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.910e-15 Identity = 46/117 (39.32%), Postives = 69/117 (58.97%), Query Frame = 3 Query: 288 PTPIHKWNLPNLPH----NTEVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIELI 623 PTPI +LP L +++ KRDD SG+ + GNK+RKLE+++ DA+A GAD +++IGG+QSNH R A A + + C +I D GN+L+ +L+GA L+ Sbjct: 16 PTPIE--HLPRLTAALGGKVDIYAKRDDCNSGLAMGGNKLRKLEYIVPDAIASGADTLVSIGGVQSNHTRMVAATAAKIGMKCVVIQEKWVPHYDAVYDRVGNILMTKLMGADSRLV 130
BLAST of CX296280 vs. ExPASy Swiss-Prot
Match: 1A1D_PYRFU (Putative 1-aminocyclopropane-1-carboxylate deaminase OS=Pyrococcus furiosus GN=PF0010 PE=3 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 1.910e-15 Identity = 44/107 (41.12%), Postives = 67/107 (62.62%), Query Frame = 3 Query: 291 TPIHKWNLPNLPH--NTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVG 605 TPI LPN+ ++++KRDDL+G+ + GNK+RKLE+L+ DA+ + AD IIT+G + SNH +AAK L D L+LR + L GN L+++++G Sbjct: 22 TPIQY--LPNISKLVGADIYVKRDDLTGLGIGGNKIRKLEYLLGDAIIRKADVIITVGAVHSNHAFVTGLAAKKLGFDVVLVLRGKE-------ELRGNYLLDKIMG 119
BLAST of CX296280 vs. ExPASy Swiss-Prot
Match: 1A1D_BURVG (1-aminocyclopropane-1-carboxylate deaminase OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=acdS PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.910e-15 Identity = 49/131 (37.40%), Postives = 74/131 (56.49%), Query Frame = 3 Query: 243 HLTPIPSHVFSLGHFPTPIH--KWNLPNLPHNTEVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIELIS 626 +L P + + G PTPI K +L E++ KR+D SG+ GNK RKLE+L+ DA+AQGAD +++IGG+QSN R A A +L + C L+ D GN+ + R++GA + L++ Sbjct: 2 NLQRFPRYPLTFG--PTPIQPLKRLSAHLGGKVELYAKREDCNSGLAFGGNKTRKLEYLIPDALAQGADTLVSIGGVQSNQTRQVAAVAAHLGMKCVLVQEHWVNYDDPVYDRVGNIQLSRMMGADVRLVA 130 The following BLAST results are available for this feature:
BLAST of CX296280 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 97
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296280 ID=CX296280; Name=CX296280; organism=Citrus clementina; type=EST; length=696bpback to top |