CX296280
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296280 vs. ExPASy Swiss-Prot
Match: 1A1D_PSEPU (1-aminocyclopropane-1-carboxylate deaminase OS=Pseudomonas putida GN=acdS PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.050e-13 Identity = 41/111 (36.94%), Postives = 64/111 (57.66%), Query Frame = 3 Query: 291 TPIHKWNLPNLPHNTEVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIEL 620 TP+ + + +L E++ KR+D SG+ GNK RKLE+L+ +A+ QG D +++IGGIQSN R A A +L + C L+ D GN+ + R++GA + L Sbjct: 19 TPLKRLS-EHLGGKVELYAKREDCNSGLAFGGNKTRKLEYLIPEAIEQGCDTLVSIGGIQSNQTRQVAAVAAHLGMKCVLVQENWVNYSDAVYDRVGNIEMSRIMGADVRL 128
BLAST of CX296280 vs. ExPASy Swiss-Prot
Match: 1A1D_ENTCL (1-aminocyclopropane-1-carboxylate deaminase OS=Enterobacter cloacae GN=acdS PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.050e-13 Identity = 41/111 (36.94%), Postives = 64/111 (57.66%), Query Frame = 3 Query: 291 TPIHKWNLPNLPHNTEVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIEL 620 TP+ + + +L E++ KR+D SG+ GNK RKLE+L+ +A+ QG D +++IGGIQSN R A A +L + C L+ D GN+ + R++GA + L Sbjct: 19 TPLKRLS-QHLGGKVELYAKREDCNSGLAFGGNKTRKLEYLIPEAIEQGCDTLVSIGGIQSNQTRQVAAVAAHLGMKCVLVQENWVNYSDAVYDRVGNIEMSRIMGADVRL 128
BLAST of CX296280 vs. ExPASy Swiss-Prot
Match: 1A1D_RALPJ (1-aminocyclopropane-1-carboxylate deaminase OS=Ralstonia pickettii (strain 12J) GN=acdS PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.202e-13 Identity = 48/131 (36.64%), Postives = 70/131 (53.44%), Query Frame = 3 Query: 243 HLTPIPSHVFSLGHFPTPIH--KWNLPNLPHNTEVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIELIS 626 +L P + + G PTPI K +L E++ KR+D SG+ GNK RKLE+L+ +A+ G D +++IGGIQSN R A A +L L C L+ D GN+ + R++GA + L S Sbjct: 2 NLQRFPRYPLTFG--PTPIQPLKRLSAHLGGKVELFAKREDCNSGLAFGGNKTRKLEYLIPEALEGGYDTLVSIGGIQSNQTRQVAAVAAHLGLKCVLVQENWVNYSDAVYDRVGNIEMSRIMGADVRLDS 130
BLAST of CX296280 vs. ExPASy Swiss-Prot
Match: 1A1D_PSEFL (1-aminocyclopropane-1-carboxylate deaminase OS=Pseudomonas fluorescens GN=acdS PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.202e-13 Identity = 41/111 (36.94%), Postives = 64/111 (57.66%), Query Frame = 3 Query: 291 TPIHKWNLPNLPHNTEVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIEL 620 TP+ + + +L E++ KR+D SG+ GNK RKLE+L+ +A+ QG D +++IGGIQSN R A A +L + C L+ D GN+ + R++GA + L Sbjct: 19 TPLKRLS-EHLGGKVELYAKREDCNSGLAFGGNKTRKLEYLIPEALEQGCDTLVSIGGIQSNQTRQVAAVAAHLGMKCVLVQENWVNYSDAVYDRVGNIEMSRIMGADVRL 128
BLAST of CX296280 vs. ExPASy Swiss-Prot
Match: 1A1D_PSEU2 (1-aminocyclopropane-1-carboxylate deaminase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=acdS PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.372e-12 Identity = 44/130 (33.85%), Postives = 71/130 (54.62%), Query Frame = 3 Query: 243 HLTPIPSHVFSLGHFP-TPIHKWNLPNLPHNTEVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIELIS 626 +L+ + + G P TP+ + + +L E++ KR+D SG+ GNK RKLE+L+ +A+ G D +++IGGIQSN R A A +L + C L+ D GN+ + R++GA + L S Sbjct: 2 NLSKFKRYPLTFGPSPITPLKRLS-EHLGGKVELYAKREDCNSGLAFGGNKTRKLEYLVPEAIDGGYDTLVSIGGIQSNQTRQVAAVAAHLGMKCVLVQENWVNYSDALYDRVGNIEMSRIMGADVRLDS 130
BLAST of CX296280 vs. ExPASy Swiss-Prot
Match: 1A1D_PSE14 (1-aminocyclopropane-1-carboxylate deaminase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=acdS PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.372e-12 Identity = 44/130 (33.85%), Postives = 71/130 (54.62%), Query Frame = 3 Query: 243 HLTPIPSHVFSLGHFP-TPIHKWNLPNLPHNTEVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIELIS 626 +L+ + + G P TP+ + + +L E++ KR+D SG+ GNK RKLE+L+ +A+ G D +++IGGIQSN R A A +L + C L+ D GN+ + R++GA + L S Sbjct: 2 NLSKFKRYPLTFGPSPITPLKRLS-EHLGGKVELYAKREDCNSGLAFGGNKTRKLEYLVPEAIDGGYDTLVSIGGIQSNQTRQVAAVAAHLGMKCVLVQENWVNYSDALYDRVGNIEMSRIMGADVRLDS 130
BLAST of CX296280 vs. ExPASy Swiss-Prot
Match: 1A1D_PSESM (1-aminocyclopropane-1-carboxylate deaminase OS=Pseudomonas syringae pv. tomato GN=acdS PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.752e-12 Identity = 43/130 (33.08%), Postives = 71/130 (54.62%), Query Frame = 3 Query: 243 HLTPIPSHVFSLGHFP-TPIHKWNLPNLPHNTEVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIELIS 626 +L+ + + G P TP+ + + +L +++ KR+D SG+ GNK RKLE+L+ +A+ G D +++IGGIQSN R A A +L + C L+ D GN+ + R++GA + L S Sbjct: 2 NLSKFKRYPLTFGPSPITPLKRLS-EHLGGKVDLYAKREDCNSGLAFGGNKTRKLEYLVPEAIEGGYDTLVSIGGIQSNQTRQVAAVAAHLGMKCVLVQENWVNYSDALYDRVGNIEMSRIMGADVRLDS 130 The following BLAST results are available for this feature:
BLAST of CX296280 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 97
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296280 ID=CX296280; Name=CX296280; organism=Citrus clementina; type=EST; length=696bpback to top |