CX296284

Overview
NameCX296284
Unique NameCX296284
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length137
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15452 contig Ccv1_Contig15452:307..443. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX296284 vs. ExPASy Swiss-Prot
Match: CATA2_ARATH (Catalase-2 OS=Arabidopsis thaliana GN=CAT2 PE=1 SV=3)

HSP 1 Score: 68.5514 bits (166), Expect = 1.145e-11
Identity = 32/35 (91.43%), Postives = 33/35 (94.29%), Query Frame = 1
Query:   31 HLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLR 135
            +LTCAD  RAPGVQTPVIVRFSTVIHERGSPETLR
Sbjct:   83 NLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLR 117          
BLAST of CX296284 vs. ExPASy Swiss-Prot
Match: CATA_HELAN (Catalase OS=Helianthus annuus PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.495e-11
Identity = 32/34 (94.12%), Postives = 32/34 (94.12%), Query Frame = 1
Query:   34 LTCADLFRAPGVQTPVIVRFSTVIHERGSPETLR 135
            LTCAD  RAPGVQTPVIVRFSTVIHERGSPETLR
Sbjct:   84 LTCADFLRAPGVQTPVIVRFSTVIHERGSPETLR 117          
BLAST of CX296284 vs. ExPASy Swiss-Prot
Match: CATA2_RICCO (Catalase isozyme 2 OS=Ricinus communis GN=CAT2 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.495e-11
Identity = 32/34 (94.12%), Postives = 32/34 (94.12%), Query Frame = 1
Query:   34 LTCADLFRAPGVQTPVIVRFSTVIHERGSPETLR 135
            LTCAD  RAPGVQTPVIVRFSTVIHERGSPETLR
Sbjct:   84 LTCADFLRAPGVQTPVIVRFSTVIHERGSPETLR 117          
BLAST of CX296284 vs. ExPASy Swiss-Prot
Match: CATA2_WHEAT (Catalase OS=Triticum aestivum GN=CATA PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.953e-11
Identity = 31/34 (91.18%), Postives = 32/34 (94.12%), Query Frame = 1
Query:   34 LTCADLFRAPGVQTPVIVRFSTVIHERGSPETLR 135
            LTCAD  RAPGVQTPVIVRFSTV+HERGSPETLR
Sbjct:   84 LTCADFLRAPGVQTPVIVRFSTVVHERGSPETLR 117          
BLAST of CX296284 vs. ExPASy Swiss-Prot
Match: CATA1_HORVU (Catalase isozyme 1 OS=Hordeum vulgare GN=CAT1 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.953e-11
Identity = 31/34 (91.18%), Postives = 32/34 (94.12%), Query Frame = 1
Query:   34 LTCADLFRAPGVQTPVIVRFSTVIHERGSPETLR 135
            LTCAD  RAPGVQTPVIVRFSTV+HERGSPETLR
Sbjct:   84 LTCADFLRAPGVQTPVIVRFSTVVHERGSPETLR 117          
BLAST of CX296284 vs. ExPASy Swiss-Prot
Match: CATA1_TOBAC (Catalase isozyme 1 OS=Nicotiana tabacum GN=CAT-1 PE=1 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 2.550e-11
Identity = 30/35 (85.71%), Postives = 32/35 (91.43%), Query Frame = 1
Query:   31 HLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLR 135
            HLTCAD  RAPGVQTPVI RFSTV+HERGSPE+LR
Sbjct:   83 HLTCADFLRAPGVQTPVICRFSTVVHERGSPESLR 117          
BLAST of CX296284 vs. ExPASy Swiss-Prot
Match: CATA2_GOSHI (Catalase isozyme 2 OS=Gossypium hirsutum GN=CAT2 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.330e-11
Identity = 31/34 (91.18%), Postives = 32/34 (94.12%), Query Frame = 1
Query:   34 LTCADLFRAPGVQTPVIVRFSTVIHERGSPETLR 135
            LTCAD  RAPGVQTP+IVRFSTVIHERGSPETLR
Sbjct:   84 LTCADFLRAPGVQTPLIVRFSTVIHERGSPETLR 117          
BLAST of CX296284 vs. ExPASy Swiss-Prot
Match: CATA1_CUCPE (Catalase isozyme 1 OS=Cucurbita pepo GN=CAT1 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.330e-11
Identity = 31/35 (88.57%), Postives = 33/35 (94.29%), Query Frame = 1
Query:   31 HLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLR 135
            +L+CAD  RAPGVQTPVIVRFSTVIHERGSPETLR
Sbjct:   83 NLSCADFLRAPGVQTPVIVRFSTVIHERGSPETLR 117          
BLAST of CX296284 vs. ExPASy Swiss-Prot
Match: CATA_SOLME (Catalase OS=Solanum melongena PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.350e-11
Identity = 29/35 (82.86%), Postives = 32/35 (91.43%), Query Frame = 1
Query:   31 HLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLR 135
            HLTCAD  RAPGVQTPVI RFSTV+HERGSPE++R
Sbjct:   83 HLTCADFLRAPGVQTPVICRFSTVVHERGSPESIR 117          
BLAST of CX296284 vs. ExPASy Swiss-Prot
Match: CATA_CAPAN (Catalase OS=Capsicum annuum GN=CAT PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.350e-11
Identity = 29/35 (82.86%), Postives = 32/35 (91.43%), Query Frame = 1
Query:   31 HLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLR 135
            HLTCAD  RAPGVQTPVI RFSTV+HERGSPE++R
Sbjct:   83 HLTCADFLRAPGVQTPVICRFSTVVHERGSPESIR 117          
The following BLAST results are available for this feature:
BLAST of CX296284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
CATA2_ARATH1.145e-1191.43Catalase-2 OS=Arabidopsis thaliana GN=CAT2 PE=1 SV... [more]
CATA_HELAN1.495e-1194.12Catalase OS=Helianthus annuus PE=2 SV=1[more]
CATA2_RICCO1.495e-1194.12Catalase isozyme 2 OS=Ricinus communis GN=CAT2 PE=... [more]
CATA2_WHEAT1.953e-1191.18Catalase OS=Triticum aestivum GN=CATA PE=2 SV=1[more]
CATA1_HORVU1.953e-1191.18Catalase isozyme 1 OS=Hordeum vulgare GN=CAT1 PE=2... [more]
CATA1_TOBAC2.550e-1185.71Catalase isozyme 1 OS=Nicotiana tabacum GN=CAT-1 P... [more]
CATA2_GOSHI3.330e-1191.18Catalase isozyme 2 OS=Gossypium hirsutum GN=CAT2 P... [more]
CATA1_CUCPE3.330e-1188.57Catalase isozyme 1 OS=Cucurbita pepo GN=CAT1 PE=2 ... [more]
CATA_SOLME4.350e-1182.86Catalase OS=Solanum melongena PE=2 SV=1[more]
CATA_CAPAN4.350e-1182.86Catalase OS=Capsicum annuum GN=CAT PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC05138D01SK FerrChloL1 Citrus clementina cDNA clone C05138D01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296284 ID=CX296284; Name=CX296284; organism=Citrus clementina; type=EST; length=137bp
ACGAGGCCTCGTCCCGAATTCGGCACGAGGCACCTTACTTGTGCTGATCT
TTTTCGAGCTCCAGGGGTTCAGACACCTGTCATTGTTCGCTTCTCCACTG
TTATCCATGAGCGGGGCAGCCCTGAGACACTCAGGGA
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