CX296284

Overview
NameCX296284
Unique NameCX296284
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length137
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15452 contig Ccv1_Contig15452:307..443. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX296284 vs. ExPASy Swiss-Prot
Match: CATA3_MAIZE (Catalase isozyme 3 OS=Zea mays GN=CAT3 PE=2 SV=2)

HSP 1 Score: 65.855 bits (159), Expect = 7.420e-11
Identity = 30/34 (88.24%), Postives = 32/34 (94.12%), Query Frame = 1 
Query:   34 LTCADLFRAPGVQTPVIVRFSTVIHERGSPETLR 135
            LTCAD  RAPGV+TPVIVRFSTVIHERGSPET+R
Sbjct:   86 LTCADFLRAPGVRTPVIVRFSTVIHERGSPETIR 119
The following BLAST results are available for this feature:
BLAST of CX296284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
CATA3_MAIZE7.420e-1188.24Catalase isozyme 3 OS=Zea mays GN=CAT3 PE=2 SV=2[more]

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Properties
Property NameValue
Genbank descriptionC05138D01SK FerrChloL1 Citrus clementina cDNA clone C05138D01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296284 ID=CX296284; Name=CX296284; organism=Citrus clementina; type=EST; length=137bp
ACGAGGCCTCGTCCCGAATTCGGCACGAGGCACCTTACTTGTGCTGATCT
TTTTCGAGCTCCAGGGGTTCAGACACCTGTCATTGTTCGCTTCTCCACTG
TTATCCATGAGCGGGGCAGCCCTGAGACACTCAGGGA
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