CX296384

Overview
NameCX296384
Unique NameCX296384
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length481
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig90 contig Ccv1_Contig90:724..1204. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX296384 vs. ExPASy Swiss-Prot
Match: CAHC_HORVU (Carbonic anhydrase, chloroplastic OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 9.199e-26
Identity = 54/79 (68.35%), Postives = 60/79 (75.95%), Query Frame = 3 
Query:    3 STDFIEDWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELW 239
            S  F+EDWV+IG PAK KV TE    PF DQCT  EKEAVNVSL NLLTYPFV+EG+ N TL L GG+YDFV+G FE W
Sbjct:  244 SFHFVEDWVRIGFPAKKKVQTECASMPFDDQCTVLEKEAVNVSLQNLLTYPFVKEGVTNGTLKLVGGHYDFVSGKFETW 322
The following BLAST results are available for this feature:
BLAST of CX296384 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
CAHC_HORVU9.199e-2668.35Carbonic anhydrase, chloroplastic OS=Hordeum vulga... [more]

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Properties
Property NameValue
Genbank descriptionC05139H11SK FerrChloL1 Citrus clementina cDNA clone C05139H11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296384 ID=CX296384; Name=CX296384; organism=Citrus clementina; type=EST; length=481bp
ACTCCACCGATTTCATTGAAGACTGGGTGAAAATTGGCATCCCTGCCAAG
TCTAAGGTGTTAACAGAGCATGGTGACAAGCCTTTTGGAGACCAATGCAC
ATACTGTGAAAAGGAGGCGGTGAATGTGTCCCTCAGTAATCTGCTAACGT
ATCCATTTGTGAGAGAAGGCTTGGTGAACAAAACTCTGGCACTCAAGGGT
GGTTACTATGATTTCGTTAATGGATCATTCGAGCTCTGGGGTCTCGACTT
TAGCCTTTCTCCTCCACTCTCCGTATGAACATCAACCGATATATGATATC
AGTGACCTCATCTTTGTTCTCTTTATTACCATGTGATCTACTTTTATCTC
CCTTTCTTCCCATGTGTACTCTTGTATGTTTTATTGAGCTGCAATTTACA
ATAAACTTACGATGAACATCGGCTTCTACTTCTTTTAACAATAACCTCGT
GCCGGATTCGGCACGAAGGGGGGGGCCCGGT
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