CX296509

Overview
NameCX296509
Unique NameCX296509
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length663
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296509 vs. ExPASy Swiss-Prot
Match: MX1_EUMJU (Interferon-induced GTP-binding protein Mx1 OS=Eumetopias jubatus GN=MX1 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.519e-22
Identity = 66/202 (32.67%), Postives = 110/202 (54.46%), Query Frame = 1
Query:    4 ADTEARIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGTDAR--NLLLGKVIPLRLGYVGVVNRSQEDIMFNRSIKDALVAEEKFFRSRPVYNGLAD--RCGVPQLAKKLNQILVQHIKAILPGLKSRISSALVSVAKEHASYG-EITESKAGQGALLLNILSKYSEAFSXMVEGK 594
            AD   + + +I  YI +   + L V P N D+A ++AL +A   DPDG RTIGI+TK D++DRGT+++  ++    V  L+ GY+ V  R Q+DI    ++ +AL  E  FF   P +  L +  R  VP LA +L   L+ HI   LP L+++I      + +E   YG ++ E +  +   L+  ++ ++   + + EG+
Sbjct:  190 ADIGHQTKKLIKKYILKQETINLVVVPCNVDIATTEALSMAEEVDPDGDRTIGILTKPDLVDRGTESKVVDVAQNLVCHLKKGYMIVKCRGQQDIQDQVTLTEALQKERDFFEDHPHFRVLLEEGRATVPCLADRLTSELITHICKTLPLLENQIKENYEKITEELQKYGSDVPEEEHEKMFFLIEKINAFNHDITSLTEGE 391          
BLAST of CX296509 vs. ExPASy Swiss-Prot
Match: MX1_BOVIN (Interferon-induced GTP-binding protein Mx1 OS=Bos taurus GN=MX1 PE=2 SV=4)

HSP 1 Score: 105.531 bits (262), Expect = 2.519e-22
Identity = 65/201 (32.34%), Postives = 112/201 (55.72%), Query Frame = 1
Query:    7 DTEARIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGTDAR--NLLLGKVIPLRLGYVGVVNRSQEDIMFNRSIKDALVAEEKFFRSRPVYNGLAD--RCGVPQLAKKLNQILVQHIKAILPGLKSRISSALVSVAKEHASYG-EITESKAGQGALLLNILSKYSEAFSXMVEGK 594
            D E +I+++I  YI +   + L V PAN D+A ++AL++A   DP G RTIGI+TK D++D+GT+ +  +++   V  L+ GY+ V  R Q+DI    S+  AL  E  FF     +  L +  +  +P LA++L   L+ HI   LP L+++I      + +E   YG +I E ++ +   L+  +  +++     +EG+
Sbjct:  182 DIEYQIKSLIRKYILRQETINLVVVPANVDIATTEALRMAQEVDPQGDRTIGILTKPDLVDKGTEDKVVDVVRNLVFHLKKGYMIVKCRGQQDIKHRMSLDKALQRERIFFEDHAHFRDLLEEGKATIPCLAERLTSELIMHICKTLPLLENQIKETHQRITEELQKYGKDIPEEESEKMFCLIEKIDTFNKEIISTIEGE 382          
BLAST of CX296509 vs. ExPASy Swiss-Prot
Match: MX1_PHOVI (Interferon-induced GTP-binding protein Mx1 OS=Phoca vitulina GN=MX1 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.290e-22
Identity = 66/202 (32.67%), Postives = 110/202 (54.46%), Query Frame = 1
Query:    4 ADTEARIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGTDAR--NLLLGKVIPLRLGYVGVVNRSQEDIMFNRSIKDALVAEEKFFRSRPVYNGLAD--RCGVPQLAKKLNQILVQHIKAILPGLKSRISSALVSVAKEHASYG-EITESKAGQGALLLNILSKYSEAFSXMVEGK 594
            AD   + + +I  YI +   + L V P N D+A ++AL +A   DP G RTIGI+TK D++DRGT+++  ++    V  L+ GY+ V  R Q+DI    ++ +AL  E  FF   P +  L +  R  VP LA KL   L+ HI   LP L+++I      + +E   YG ++ E +  +   L+  ++ ++   + ++EG+
Sbjct:  190 ADIGRQTKQLIRKYILKQETINLVVVPCNVDIATTEALSMAQEVDPSGDRTIGILTKPDLVDRGTESKVVDVAQNLVCHLKKGYMIVKCRGQQDIQDQVTLTEALQKERDFFEDHPHFRVLLEEGRATVPCLADKLTSELITHICKTLPLLENQIKENHEKITEELKKYGSDVPEEEHEKMFFLIEKINAFNHDINSLIEGE 391          
BLAST of CX296509 vs. ExPASy Swiss-Prot
Match: MX1_OTABY (Interferon-induced GTP-binding protein Mx1 OS=Otaria byronia GN=MX1 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.290e-22
Identity = 66/202 (32.67%), Postives = 109/202 (53.96%), Query Frame = 1
Query:    4 ADTEARIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGTDAR--NLLLGKVIPLRLGYVGVVNRSQEDIMFNRSIKDALVAEEKFFRSRPVYNGLAD--RCGVPQLAKKLNQILVQHIKAILPGLKSRISSALVSVAKEHASYG-EITESKAGQGALLLNILSKYSEAFSXMVEGK 594
            AD   + + +I  YI +   + L V P N D+A ++AL +A   DPDG RTIGI+TK D++DRGT+++  ++    V  L+ GY+ V  R Q+DI    ++ +AL  E  FF   P +  L +  R  VP LA +L   L+ HI   LP L+ +I      + +E   YG ++ E +  +   L+  ++ ++   + + EG+
Sbjct:  190 ADIGHQTKKLIKKYILKQETINLVVVPCNVDIATTEALSMAQEVDPDGDRTIGILTKPDLVDRGTESKVVDVAQNLVCHLKKGYMIVKCRGQQDIQDQVTLTEALQKERDFFEDHPHFRVLLEEGRATVPCLADRLTSELITHICKTLPLLEKQIKENYEKITEELQKYGSDVPEEEHEKMFFLIEKINAFNHDITSLTEGE 391          
BLAST of CX296509 vs. ExPASy Swiss-Prot
Match: MX1_SHEEP (Interferon-induced GTP-binding protein Mx1 OS=Ovis aries GN=MX1 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.297e-22
Identity = 65/201 (32.34%), Postives = 112/201 (55.72%), Query Frame = 1
Query:    7 DTEARIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGTDAR--NLLLGKVIPLRLGYVGVVNRSQEDIMFNRSIKDALVAEEKFFRSRPVYNGLAD--RCGVPQLAKKLNQILVQHIKAILPGLKSRISSALVSVAKEHASYG-EITESKAGQGALLLNILSKYSEAFSXMVEGK 594
            D E +I+++I  YI +   + L V PAN D+A ++AL++A   DP G RTIGI+TK D++D+GT+ +  +++   V  L+ GY+ V  R Q++I    S+  AL  E  FF     +  L +  R  +P LA++L   L+ HI   LP L+++I      + +E   YG +I E ++ +   L+  +  +++     +EG+
Sbjct:  188 DIEYQIKSLIRKYILRQETINLVVVPANVDIATTEALRMAQDVDPQGDRTIGILTKPDLVDKGTEDKVVDVVRNLVFHLKKGYMIVKCRGQQEIQHRLSLDKALQRERIFFEDHTHFRDLLEEGRATIPCLAERLTNELIMHICKTLPLLENQIKETHQRITEELQKYGKDIPEEESEKMFSLIEKIDTFNKEIISTIEGE 388          
BLAST of CX296509 vs. ExPASy Swiss-Prot
Match: MX_CHICK (Interferon-induced GTP-binding protein Mx OS=Gallus gallus GN=MX PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 7.329e-22
Identity = 63/201 (31.34%), Postives = 104/201 (51.74%), Query Frame = 1
Query:    7 DTEARIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGTD--ARNLLLGKVIPLRLGYVGVVNRSQEDIMFNRSIKDALVAEEKFFRSRPVYNGLAD--RCGVPQLAKKLNQILVQHIKAILPGLKSRISSALVSVAKEHASYGEITESKAGQGAL-LLNILSKYSEAFSXMVEGK 594
            D   +I+T++  YI     +I+ V P N D+A ++AL++A   DP G RT+G++TK D+++ GT+     ++  +VIPLR GY+ V    Q D     S   A+  E +FF +   ++ L D  +  +P LA KL   LV  I   LP ++ ++  AL    KE   Y + T        + L+ ++  ++E  S  + GK
Sbjct:  237 DNGQQIKTLLKKYIGCKETIIVVVVPCNVDIATTEALKMAQEVDPTGERTLGVLTKPDLVNEGTEETVLKIIQNEVIPLRKGYMIVKCYGQMDFCNELSFTSAIQQEREFFETHKHFSTLLDENKATIPHLANKLTDELVGRIIKTLPAIEKQVHDALQQAKKELQKYTQSTHPTVSDKTIFLVGLIKAFNEDISQTMHGK 437          
BLAST of CX296509 vs. ExPASy Swiss-Prot
Match: MXE_DANRE (Interferon-induced GTP-binding protein MxE OS=Danio rerio GN=mxe PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 7.329e-22
Identity = 59/170 (34.71%), Postives = 99/170 (58.24%), Query Frame = 1
Query:    7 DTEARIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGTD--ARNLLLGKVIPLRLGYVGVVNRSQEDIMFNRSIKDALVAEEKFFRSRPVYNGLAD--RCGVPQLAKKLNQILVQHIKAILPGLKSRISSALVSVAKEHASYGE 504
            D E +I+++I  +IK+   + L V PAN D+A ++AL++A   DP G RT+GI+TK D++DRG +      +  +VIPL+ GY+ V  R Q+DI     + +AL  E +FF     +  L +  +  +P LA++L + LV+HI   LP L++++   L   + +    G+
Sbjct:  166 DIEKQIKSLIEKFIKRQETISLVVVPANIDIATTEALKMASTVDPTGQRTLGILTKPDLVDRGMEDTVVRTVNNEVIPLKKGYMIVKCRGQQDINDKLGLVEALEKERRFFDENVHFRSLLEDRKATIPLLAERLTKELVEHIAKNLPQLQNQLEMKLEKTSADLRGLGD 335          
BLAST of CX296509 vs. ExPASy Swiss-Prot
Match: MX_SINCH (Interferon-induced GTP-binding protein Mx OS=Siniperca chuatsi GN=mx PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 9.572e-22
Identity = 63/179 (35.20%), Postives = 100/179 (55.87%), Query Frame = 1
Query:   19 RIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGTD--ARNLLLGKVIPLRLGYVGVVNRSQEDIMFNRSIKDALVAEEKFFRSRPVYNGLAD--RCGVPQLAKKLNQILVQHIKAILPGLKSRISSALVSVAKEHASYGEITESKAGQGALLL 543
            +I+ +I ++I +   + L V P N D+A ++AL +A   DPDG RT+GI+TK D++D+GT+     ++  +VI L+ GY+ V  R Q++I    S+ +A+  E  FFR    ++ L +     VP+LA+KL   LV HI+  LP L+ +I   L     E   YG    S A +  + L
Sbjct:  160 QIKRLIQTFITKQETISLVVVPCNVDIATTEALNMAQRVDPDGERTLGILTKPDLVDKGTEDTVVEIVHNEVIHLKKGYMIVKCRGQKEITERVSLTEAIERETAFFREHVYFHTLYNEGHATVPKLAEKLTLELVHHIEKSLPRLEEQIEEKLTQTRAELERYGNGPPSDAAEKLIFL 338          
BLAST of CX296509 vs. ExPASy Swiss-Prot
Match: MX_EPICO (Interferon-induced GTP-binding protein Mx OS=Epinephelus coioides GN=mx PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.250e-21
Identity = 65/183 (35.52%), Postives = 103/183 (56.28%), Query Frame = 1
Query:    7 DTEARIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGTDAR--NLLLGKVIPLRLGYVGVVNRSQEDIMFNRSIKDALVAEEKFFRSRPVYNGLAD--RCGVPQLAKKLNQILVQHIKAILPGLKSRISSALVSVAKEHASYGEITESKAGQGALLL 543
            D   +I+ +I  +I +   + L V P N D+A ++AL++A   DPDG RT+GI+TK D++D+GT+     ++  +VI L+ GY+ V  R Q++I    S+ +AL +E+ FFR    ++ L +  +  VP+LA+KL   LV HI+  LP L+ +I   L     E   YG    S A +    L
Sbjct:  156 DIGKQIKGLIQRFITRQETISLVVVPCNVDIATTEALKMAQEVDPDGERTLGILTKPDLVDKGTEETVVEIVHNEVIHLKKGYMIVRCRGQKEITEKVSLTEALESEKAFFRDHVHFHTLYNEGQATVPKLAEKLTLELVHHIERSLPRLEEQIEDKLEQTQAELERYGSGPPSDATEKLFFL 338          
BLAST of CX296509 vs. ExPASy Swiss-Prot
Match: MX_ANAPL (Interferon-induced GTP-binding protein Mx OS=Anas platyrhynchos GN=MX PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.633e-21
Identity = 70/222 (31.53%), Postives = 120/222 (54.05%), Query Frame = 1
Query:    7 DTEARIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGTDAR--NLLLGKVIPLRLGYVGVVNRSQEDIMFNRSIKDALVAEEKFFRSRPVYNGLAD--RCGVPQLAKKLNQILVQHIKAILPGLKSRISSALVSVAKEHASYGEITES-KAGQGALLLNILSKYSEAFSXMVEGKNEEMSTSELSGGARIHYIFQS 657
            D   +I+ +I   I     + L V P N D+A ++AL++A   DP G RT+GI+TK D++D GT+    +++  +VIPLR GY+ V  R Q DI    ++  A+  E +FF +   ++ L D  +  +P LA KL   LV HI   LP ++S+I   L    +E   Y   T + +  + A L +++  +++  S ++ G+ E +  +E+   A++   FQ+
Sbjct:  254 DIGEQIKKLIKKIISSKETINLVVVPCNVDIATTEALKMAQEVDPKGERTLGILTKPDLVDIGTEEYIISIVQNEVIPLRKGYMVVKCRGQRDIHNKLTLASAIHQERQFFETHKCFSILLDQNKATIPHLAMKLTNELVAHIIKTLPTIESQIREVLQKSVQELQKYRRGTPTIETEKLAFLTDLIKLFNQDVSRVICGE-EHLFGNEIRLFAKLRKEFQT 474          
The following BLAST results are available for this feature:
BLAST of CX296509 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 73
Match NameE-valueIdentityDescription
MX1_EUMJU2.519e-2232.67Interferon-induced GTP-binding protein Mx1 OS=Eume... [more]
MX1_BOVIN2.519e-2232.34Interferon-induced GTP-binding protein Mx1 OS=Bos ... [more]
MX1_PHOVI3.290e-2232.67Interferon-induced GTP-binding protein Mx1 OS=Phoc... [more]
MX1_OTABY3.290e-2232.67Interferon-induced GTP-binding protein Mx1 OS=Otar... [more]
MX1_SHEEP4.297e-2232.34Interferon-induced GTP-binding protein Mx1 OS=Ovis... [more]
MX_CHICK7.329e-2231.34Interferon-induced GTP-binding protein Mx OS=Gallu... [more]
MXE_DANRE7.329e-2234.71Interferon-induced GTP-binding protein MxE OS=Dani... [more]
MX_SINCH9.572e-2235.20Interferon-induced GTP-binding protein Mx OS=Sinip... [more]
MX_EPICO1.250e-2135.52Interferon-induced GTP-binding protein Mx OS=Epine... [more]
MX_ANAPL1.633e-2131.53Interferon-induced GTP-binding protein Mx OS=Anas ... [more]

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Properties
Property NameValue
Genbank descriptionC05142A12SK FerrChloL1 Citrus clementina cDNA clone C05142A12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296509 ID=CX296509; Name=CX296509; organism=Citrus clementina; type=EST; length=663bp
GAGGCTGATACTGAAGCACGAATTAGAACGATGATTATGTCATATATCAA
GCAACCAAGTTGTCTAATTCTTGCAGTTACACCGGCAAATTCAGATTTGG
CAAACTCAGATGCCCTTCAAATTGCTGGAATTGCTGATCCGGATGGTTAT
AGAACCATAGGCATAATCACAAAGTTGGATATTATGGACAGAGGTACTGA
TGCCCGTAATTTGTTACTCGGAAAAGTGATTCCGCTTCGGCTTGGTTATG
TTGGTGTTGTGAATAGGAGTCAGGAGGATATTATGTTCAACCGGAGTATC
AAGGATGCACTAGTGGCTGAGGAAAAGTTCTTCCGTAGTCGCCCTGTATA
TAATGGTCTAGCAGATCGTTGTGGTGTTCCTCAGTTGGCAAAGAAGTTGA
ACCAGATTCTTGTACAACATATCAAGGCTATACTTCCTGGGTTGAAGTCA
CGCATTAGCTCTGCATTAGTTTCTGTTGCAAAGGAGCATGCAAGCTACGG
GGAAATCACAGAATCAAAGGCTGGTCAGGGAGCTCTACTCCTGAATATTC
TTTCTAAATACTCCGAAGCATTTTCTTNCATGGTGGAGGGAAAGAATGAA
GAAATGTCAACATCTGAGCTTTCTGGCGGGGCACGAATTCACTATATTTT
TCAGTCAATCTTT
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