CX296514
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296514 vs. ExPASy Swiss-Prot
Match: ERF12_ARATH (Ethylene-responsive transcription factor ERF012 OS=Arabidopsis thaliana GN=ERF012 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.381e-11 Identity = 32/60 (53.33%), Postives = 44/60 (73.33%), Query Frame = 1 Query: 439 KHYRGVRRRPWGRYAAEIRDPNRKGSRVWLGTFDTAVEAAKAYDNSAFRLRGSKAILNFP 618 K Y+GVR R WG + +EIR PN+K +R+WLG++ TA AA+AYD + L+G +A LNFP Sbjct: 48 KKYKGVRMRSWGSWVSEIRAPNQK-TRIWLGSYSTAEAAARAYDVALLCLKGPQANLNFP 106
BLAST of CX296514 vs. ExPASy Swiss-Prot
Match: SHN2_ARATH (Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana GN=SHN2 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.415e-11 Identity = 32/64 (50.00%), Postives = 43/64 (67.19%), Query Frame = 1 Query: 430 IEEKHYRGVRRRPWGRYAAEIRDPNRKGSRVWLGTFDTAVEAAKAYDNSAFRLRGSKAILNFPL 621 + + +RGVR+R WG + +EIR P K RVWLGTF+TA AA+AYD +A + G A NFP+ Sbjct: 2 VHSRKFRGVRQRQWGSWVSEIRHPLLK-RRVWLGTFETAEAAARAYDQAALLMNGQNAKTNFPV 64
BLAST of CX296514 vs. ExPASy Swiss-Prot
Match: DRE2C_ARATH (Dehydration-responsive element-binding protein 2C OS=Arabidopsis thaliana GN=DREB2C PE=2 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 4.415e-11 Identity = 32/58 (55.17%), Postives = 43/58 (74.14%), Query Frame = 1 Query: 445 YRGVRRRPWGRYAAEIRDPNRKGSRVWLGTFDTAVEAAKAYDNSAFRLRGSKAILNFP 618 YRGVR+R WG++ AEIR+P+ G+R+WLGTF ++ EAA AYD +A + G A LN P Sbjct: 72 YRGVRQRRWGKWVAEIREPDG-GARLWLGTFSSSYEAALAYDEAAKAIYGQSARLNLP 128
BLAST of CX296514 vs. ExPASy Swiss-Prot
Match: DRE1B_ARATH (Dehydration-responsive element-binding protein 1B OS=Arabidopsis thaliana GN=DREB1B PE=2 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 4.415e-11 Identity = 34/63 (53.97%), Postives = 47/63 (74.60%), Query Frame = 1 Query: 433 EEKH--YRGVRRRPWGRYAAEIRDPNRKGSRVWLGTFDTAVEAAKAYDNSAFRLRGSKAILNF 615 E +H YRGVR+R G++ +E+R+PN+K +R+WLGTF TA AA+A+D +A LRG A LNF Sbjct: 42 ETRHPIYRGVRQRNSGKWVSEVREPNKK-TRIWLGTFQTAEMAARAHDVAALALRGRSACLNF 103
BLAST of CX296514 vs. ExPASy Swiss-Prot
Match: ERF17_ARATH (Ethylene-responsive transcription factor ERF017 OS=Arabidopsis thaliana GN=ERF017 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.767e-11 Identity = 29/61 (47.54%), Postives = 45/61 (73.77%), Query Frame = 1 Query: 436 EKHYRGVRRRPWGRYAAEIRDPNRKGSRVWLGTFDTAVEAAKAYDNSAFRLRGSKAILNFP 618 + Y+GVR+R WG++ +EIR PN + R+WLG++DT +AA+A+D + + LRG+ A NFP Sbjct: 9 QSKYKGVRKRKWGKWVSEIRLPNSR-ERIWLGSYDTPEKAARAFDAALYCLRGNNAKFNFP 68
BLAST of CX296514 vs. ExPASy Swiss-Prot
Match: DRE2H_ARATH (Putative dehydration-responsive element-binding protein 2H OS=Arabidopsis thaliana GN=DREB2H PE=5 SV=3) HSP 1 Score: 67.781 bits (164), Expect = 5.767e-11 Identity = 31/59 (52.54%), Postives = 43/59 (72.88%), Query Frame = 1 Query: 445 YRGVRRRPWGRYAAEIRDPNRKGSRVWLGTFDTAVEAAKAYDNSAFRLRGSKAILNFPL 621 Y GVR+R WG++ AEIR+P R G+++WLGTF ++ EAA AYD ++ + G A LN PL Sbjct: 67 YTGVRQRTWGKWVAEIREPGR-GAKLWLGTFSSSYEAALAYDEASKAIYGQSARLNLPL 124
BLAST of CX296514 vs. ExPASy Swiss-Prot
Match: ERF16_ARATH (Ethylene-responsive transcription factor ERF016 OS=Arabidopsis thaliana GN=ERF016 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.531e-11 Identity = 31/58 (53.45%), Postives = 43/58 (74.14%), Query Frame = 1 Query: 445 YRGVRRRPWGRYAAEIRDPNRKGSRVWLGTFDTAVEAAKAYDNSAFRLRGSKAILNFP 618 Y GVR+R WG++ AEIR PN + R+WLG+FD+A +AA+A+D + + LRG A NFP Sbjct: 7 YTGVRKRKWGKWVAEIRLPNSR-DRIWLGSFDSAEKAARAFDAALYCLRGPGARFNFP 63
BLAST of CX296514 vs. ExPASy Swiss-Prot
Match: DRE1C_ARATH (Dehydration-responsive element-binding protein 1C OS=Arabidopsis thaliana GN=DREB1C PE=2 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 7.531e-11 Identity = 34/63 (53.97%), Postives = 46/63 (73.02%), Query Frame = 1 Query: 433 EEKH--YRGVRRRPWGRYAAEIRDPNRKGSRVWLGTFDTAVEAAKAYDNSAFRLRGSKAILNF 615 E +H YRGVR+R G++ E+R+PN+K +R+WLGTF TA AA+A+D +A LRG A LNF Sbjct: 45 ETRHPIYRGVRQRNSGKWVCELREPNKK-TRIWLGTFQTAEMAARAHDVAAIALRGRSACLNF 106
BLAST of CX296514 vs. ExPASy Swiss-Prot
Match: DRE1D_ARATH (Dehydration-responsive element-binding protein 1D OS=Arabidopsis thaliana GN=DREB1D PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 9.836e-11 Identity = 34/63 (53.97%), Postives = 45/63 (71.43%), Query Frame = 1 Query: 433 EEKH--YRGVRRRPWGRYAAEIRDPNRKGSRVWLGTFDTAVEAAKAYDNSAFRLRGSKAILNF 615 E +H YRGVR+R G++ E+R+PN+K SR+WLGTF T AA+A+D +A LRG A LNF Sbjct: 48 ETRHPIYRGVRQRNSGKWVCEVREPNKK-SRIWLGTFPTVEMAARAHDVAALALRGRSACLNF 109 The following BLAST results are available for this feature:
BLAST of CX296514 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 119
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296514 ID=CX296514; Name=CX296514; organism=Citrus clementina; type=EST; length=661bpback to top |