CX296527

Overview
NameCX296527
Unique NameCX296527
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length688
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_ACTSZ (Chaperone protein dnaJ OS=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.439e-24
Identity = 55/136 (40.44%), Postives = 83/136 (61.03%), Query Frame = 1
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQ------HAAXXXXXXXXXVNIQDIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMG 624
            +A + YYE+L V RGA ++ IK+AY++LA+KYHPD+ +G++ + ++F EIN AYE+LSD E R  YD YG    +Q       A             +DIFS  FGGG     +++V+GDD+  +++ TLE+   G
Sbjct:    1 MAKQDYYEILGVERGADEKAIKKAYKRLAMKYHPDRTKGDKTSEEKFKEINEAYEILSDKEKRAAYDQYGHAAFEQGGFGGAGAGGFGGGFGGFGGFEDIFSEMFGGG--SSRQRVVRGDDLRYDIEITLEEAVRG 134          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNJA1_PONAB (DnaJ homolog subfamily A member 1 OS=Pongo abelii GN=DNAJA1 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.098e-23
Identity = 60/135 (44.44%), Postives = 85/135 (62.96%), Query Frame = 1
Query:  247 SYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQDIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREK 651
            +YY+VL V   A+ E++K+AYRKLALKYHPDKN    E   +F +I+ AYEVLSD++ R +YD  GE+ +K+  A          +  DIF  FFGGG M+ +    +G +V+ +L  TLEDLY G + K+  +K
Sbjct:    6 TYYDVLGVKPNATQEELKKAYRKLALKYHPDKNPNEGE---KFKQISQAYEVLSDAKKRELYDKGGEQAIKEGGAGGGFG-----SPMDIFDMFFGGGRMQRER---RGKNVVHQLSVTLEDLYNGATRKLALQK 129          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_FRATU (Chaperone protein dnaJ OS=Francisella tularensis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.874e-23
Identity = 55/129 (42.64%), Postives = 78/129 (60.47%), Query Frame = 1
Query:  244 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQDIFSSFFGGGPM--EEDEKIVKGDDVIVELDATLEDLYMG 624
            K YYE+L + + AS  +IKRAYRKLA+KYHPD+N G++EA  +F EI+ AYE+LSD   R+ YD +G  G+ Q +             +DIF +FFGGG        +  +G D+   L+ TLE+ + G
Sbjct:    4 KCYYEILNISKTASGVEIKRAYRKLAMKYHPDRNPGDKEAEIKFKEISEAYEILSDDSKRSRYDQFGHAGVNQQSGFGGTG-----GFEDIFDTFFGGGTSRGSNRSRASRGSDLEYTLEITLEEAFFG 127          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_FRATH (Chaperone protein dnaJ OS=Francisella tularensis subsp. holarctica (strain LVS) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.874e-23
Identity = 55/129 (42.64%), Postives = 78/129 (60.47%), Query Frame = 1
Query:  244 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQDIFSSFFGGGPM--EEDEKIVKGDDVIVELDATLEDLYMG 624
            K YYE+L + + AS  +IKRAYRKLA+KYHPD+N G++EA  +F EI+ AYE+LSD   R+ YD +G  G+ Q +             +DIF +FFGGG        +  +G D+   L+ TLE+ + G
Sbjct:    4 KCYYEILNISKTASGVEIKRAYRKLAMKYHPDRNPGDKEAEIKFKEISEAYEILSDDSKRSRYDQFGHAGVNQQSGFGGTG-----GFEDIFDTFFGGGTSRGSNRSRASRGSDLEYTLEITLEEAFFG 127          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_ACTP2 (Chaperone protein dnaJ OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.874e-23
Identity = 58/136 (42.65%), Postives = 81/136 (59.56%), Query Frame = 1
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAA----XXXXXXXXXVNIQDIFSSFFGG--GPMEEDEKIVKGDDVIVELDATLEDLYMG 624
            +A K YYEVL + +GAS+  IKRAY++LA K+HPDKNQG+++A ++F EIN AYEVL D+E R  YD YG    +Q                   +DIFS  FGG  G       +V+GDD+  +++ +LE+   G
Sbjct:    1 MAKKDYYEVLGLQKGASENDIKRAYKRLASKHHPDKNQGSKDAEEKFKEINEAYEVLGDAEKRAAYDQYGHAAFEQGGGAGGFGGGFGGGGFGGFEDIFSEMFGGGFGGGGRRNHVVRGDDLRYDIEISLEEAVKG 136          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNJA1_RAT (DnaJ homolog subfamily A member 1 OS=Rattus norvegicus GN=Dnaja1 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.196e-23
Identity = 60/135 (44.44%), Postives = 85/135 (62.96%), Query Frame = 1
Query:  247 SYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQDIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREK 651
            +YY+VL V   A+ E++K+AYRKLALKYHPDKN    E   +F +I+ AYEVL+DS+ R +YD  GE+ +K+  A          +  DIF  FFGGG   + E+  +G +V+ +L  TLEDLY G + K+  +K
Sbjct:    6 TYYDVLGVKPNATQEELKKAYRKLALKYHPDKNPNEGE---KFKQISQAYEVLADSKKRELYDKGGEQAIKEGGAGGGFG-----SPMDIFDMFFGGGGRMQRER--RGKNVVHQLSVTLEDLYNGATRKLALQK 130          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNJA1_MOUSE (DnaJ homolog subfamily A member 1 OS=Mus musculus GN=Dnaja1 PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.196e-23
Identity = 60/135 (44.44%), Postives = 85/135 (62.96%), Query Frame = 1
Query:  247 SYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQDIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREK 651
            +YY+VL V   A+ E++K+AYRKLALKYHPDKN    E   +F +I+ AYEVL+DS+ R +YD  GE+ +K+  A          +  DIF  FFGGG   + E+  +G +V+ +L  TLEDLY G + K+  +K
Sbjct:    6 TYYDVLGVKPNATQEELKKAYRKLALKYHPDKNPNEGE---KFKQISQAYEVLADSKKRELYDKGGEQAIKEGGAGGGFG-----SPMDIFDMFFGGGGRMQRER--RGKNVVHQLSVTLEDLYNGATRKLALQK 130          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNJA1_HUMAN (DnaJ homolog subfamily A member 1 OS=Homo sapiens GN=DNAJA1 PE=1 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 3.196e-23
Identity = 60/135 (44.44%), Postives = 85/135 (62.96%), Query Frame = 1
Query:  247 SYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQDIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREK 651
            +YY+VL V   A+ E++K+AYRKLALKYHPDKN    E   +F +I+ AYEVLSD++ R +YD  GE+ +K+  A          +  DIF  FFGGG   + E+  +G +V+ +L  TLEDLY G + K+  +K
Sbjct:    6 TYYDVLGVKPNATQEELKKAYRKLALKYHPDKNPNEGE---KFKQISQAYEVLSDAKKRELYDKGGEQAIKEGGAGGGFG-----SPMDIFDMFFGGGGRMQRER--RGKNVVHQLSVTLEDLYNGATRKLALQK 130          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_HAEI8 (Chaperone protein dnaJ OS=Haemophilus influenzae (strain 86-028NP) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.196e-23
Identity = 57/135 (42.22%), Postives = 81/135 (60.00%), Query Frame = 1
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHA-----AXXXXXXXXXVNIQDIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMG 624
            +A K YYEVL + +GAS++ IKRAY++LA K+HPDKNQG++EA ++F EIN AYEVL D + R  YD YG    +Q                     DIF   FGGG     +++V+G+D+  +L+ +LE+   G
Sbjct:    1 MAKKDYYEVLGLQKGASEDDIKRAYKRLASKHHPDKNQGSKEAEEKFKEINEAYEVLGDDQKRAAYDQYGHAAFEQGGGTGGFGGGFGGADFGDMFGDIFGDIFGGG--RGRQRVVRGEDLRYDLEISLEEAVKG 133          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_CLOB8 (Chaperone protein dnaJ OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.196e-23
Identity = 58/137 (42.34%), Postives = 78/137 (56.93%), Query Frame = 1
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQ-----DIFSSFFGGGPMEEDEK--IVKGDDVIVELDATLEDLYMG 624
            +A K YYE+L + +GASD++IKRA+RKLA+KYHPD+NQGN EA ++F EIN AY+VLSD E +  YD +G                           DIF SFFGGG      +   V+G+D+   +  T E+   G
Sbjct:    1 MANKDYYELLGLQKGASDDEIKRAFRKLAVKYHPDRNQGNAEAEEKFKEINEAYQVLSDPEKKAKYDQFGSAAFDGSGGFGGGGFGGFDGFDMGGFGDIFESFFGGGGSNSRRRNGPVRGNDIEYTITLTFEEAVFG 137          
The following BLAST results are available for this feature:
BLAST of CX296527 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_ACTSZ6.439e-2440.44Chaperone protein dnaJ OS=Actinobacillus succinoge... [more]
DNJA1_PONAB1.098e-2344.44DnaJ homolog subfamily A member 1 OS=Pongo abelii ... [more]
DNAJ_FRATU1.874e-2342.64Chaperone protein dnaJ OS=Francisella tularensis G... [more]
DNAJ_FRATH1.874e-2342.64Chaperone protein dnaJ OS=Francisella tularensis s... [more]
DNAJ_ACTP21.874e-2342.65Chaperone protein dnaJ OS=Actinobacillus pleuropne... [more]
DNJA1_RAT3.196e-2344.44DnaJ homolog subfamily A member 1 OS=Rattus norveg... [more]
DNJA1_MOUSE3.196e-2344.44DnaJ homolog subfamily A member 1 OS=Mus musculus ... [more]
DNJA1_HUMAN3.196e-2344.44DnaJ homolog subfamily A member 1 OS=Homo sapiens ... [more]
DNAJ_HAEI83.196e-2342.22Chaperone protein dnaJ OS=Haemophilus influenzae (... [more]
DNAJ_CLOB83.196e-2342.34Chaperone protein dnaJ OS=Clostridium beijerinckii... [more]

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Properties
Property NameValue
Genbank descriptionC05142E07SK FerrChloL1 Citrus clementina cDNA clone C05142E07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296527 ID=CX296527; Name=CX296527; organism=Citrus clementina; type=EST; length=688bp
GAGGCCTCGTCCCGAATTCGGCACGAGGCAGCAACGACTTCTGAATTGAC
AGATAAAAATTAAAAAGAAAAAAATTATTGTAATCTCAGAATTTTGCTAA
GATCTGAAAATTAAACCCTAGATTCTAAGTTTCGGAGAGGCATTAAACTC
TCTCCTCTTGTTGATCTATTAATGGCGCATCGGCGAGCAAGGCTGTTGTT
CCTATTGTGCGCACTTTGTTACGCCCTCAACGTCATTGCGGGGAAGAGCT
ACTATGAAGTATTGCAAGTGCCGAGGGGAGCATCGGACGAGCAGATCAAA
AGAGCGTATAGAAAGCTGGCATTGAAGTATCATCCTGATAAAAACCAGGG
GAATGAAGAAGCTAATAAGCGATTTGCTGAGATTAACAATGCGTATGAGG
TGTTATCGGATAGCGAAACGAGGAATATATATGATACATATGGAGAAGAG
GGACTGAAACAGCATGCTGCTGGTGGAGGCAGAGGTGGAGGGATGGGAGT
TAACATTCAAGACATTTTCAGCTCTTTCTTTGGTGGAGGTCCAATGGAAG
AGGATGAGAAAATTGTGAAGGGTGATGATGTTATTGTTGAACTGGATGCA
ACATTGGAAGATTTATACATGGGAGGTTCCCTAAAGGTATGGAGAGAGAA
AATGTTATAAGCCAGCCCCAGGCAAAGGCGCTGTAACT
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