CX296527

Overview
NameCX296527
Unique NameCX296527
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length688
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ1_CERAE (DnaJ homolog subfamily A member 1 OS=Cercopithecus aethiops GN=DNAJA1 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.196e-23
Identity = 60/135 (44.44%), Postives = 85/135 (62.96%), Query Frame = 1
Query:  247 SYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQDIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREK 651
            +YY+VL V   A+ E++K+AYRKLALKYHPDKN    E   +F +I+ AYEVLSD++ R +YD  GE+ +K+  A          +  DIF  FFGGG   + E+  +G +V+ +L  TLEDLY G + K+  +K
Sbjct:    6 TYYDVLGVKPNATQEELKKAYRKLALKYHPDKNPNEGE---KFKQISQAYEVLSDAKKRELYDKGGEQAIKEGGAGGGFG-----SPMDIFDMFFGGGGRMQRER--RGKNVVHQLSVTLEDLYNGATRKLALQK 130          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNJA1_BOVIN (DnaJ homolog subfamily A member 1 OS=Bos taurus GN=DNAJA1 PE=2 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 4.174e-23
Identity = 60/135 (44.44%), Postives = 85/135 (62.96%), Query Frame = 1
Query:  247 SYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQDIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREK 651
            +YY+VL V   A+ E++K+AYRKLALKYHPDKN    E   +F +I+ AYEVLSD++ R +YD  GE+ +K+  A          +  DIF  FFGGG   + E+  +G +V+ +L  TLEDLY G + K+  +K
Sbjct:    6 TYYDVLGVKPNATQEELKKAYRKLALKYHPDKNPNEGE---KFKQISQAYEVLSDAKKRELYDKGGEQAIKEGGAGGGFG-----SPMDIFDMFFGGGGRMQRER--RGKNVVHQLTVTLEDLYNGATRKLALQK 130          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_WOLTR (Chaperone protein dnaJ OS=Wolbachia sp. subsp. Brugia malayi (strain TRS) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.174e-23
Identity = 61/134 (45.52%), Postives = 78/134 (58.21%), Query Frame = 1
Query:  244 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQDIFSSFFGG-------GPMEEDEKIVKGDDVIVELDATLEDLYMG 624
            K YY++L V R AS ++IK+AY+KLALKYHPD+N GN+EA ++F EI  AYEVLSDSE R  YD YG EG                +  DIF+ FFGG          +     V G D+  +L+ TLED + G
Sbjct:    4 KDYYKLLGVDRNASTDEIKKAYKKLALKYHPDRNPGNKEAEEKFKEITAAYEVLSDSEKRAGYDRYGHEG-ASGGFDFSQGFGSAGDFSDIFNDFFGGEFGSSSRSKAKRSTTGVPGADLRYDLEITLEDAFKG 136          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_MANSM (Chaperone protein dnaJ OS=Mannheimia succiniciproducens (strain MBEL55E) GN=dnaJ PE=3 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 4.174e-23
Identity = 53/135 (39.26%), Postives = 81/135 (60.00%), Query Frame = 1
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQ-----HAAXXXXXXXXXVNIQDIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMG 624
            +A + YYE L V +GA +++IKRAY++LA+KYHPD+  G++ A ++F E+N AYE+L D E R  YD YG    +Q      A             +DIFS  FGGG     +++V+G+D+  +++ TLE+   G
Sbjct:    1 MAKQDYYETLGVQKGADEKEIKRAYKRLAMKYHPDRTNGDKAAEEKFKEVNEAYEILMDKEKRAAYDQYGHAAFEQGGFGGGAGGFGGGFGGFGGFEDIFSEMFGGGASR--QRVVRGEDLRYDIEITLEEAVRG 133          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_FRATW (Chaperone protein dnaJ OS=Francisella tularensis subsp. tularensis (strain WY96-3418) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.174e-23
Identity = 55/129 (42.64%), Postives = 78/129 (60.47%), Query Frame = 1
Query:  244 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQDIFSSFFGGGPM--EEDEKIVKGDDVIVELDATLEDLYMG 624
            K YYE+L V + AS  +IKRAYRKLA++YHPD+N G++EA  +F EI+ AYE+LSD   R+ YD +G  G+ Q +             +DIF +FFGGG        +  +G D+   L+ TLE+ + G
Sbjct:    4 KCYYEILNVSKTASGVEIKRAYRKLAMEYHPDRNPGDKEAEIKFKEISEAYEILSDDSKRSRYDQFGHAGVNQQSGFGGTG-----GFEDIFDTFFGGGTSRGSNRSRASRGSDLEYTLEITLEEAFFG 127          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_FRATT (Chaperone protein dnaJ OS=Francisella tularensis subsp. tularensis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.174e-23
Identity = 55/129 (42.64%), Postives = 78/129 (60.47%), Query Frame = 1
Query:  244 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQDIFSSFFGGGPM--EEDEKIVKGDDVIVELDATLEDLYMG 624
            K YYE+L V + AS  +IKRAYRKLA++YHPD+N G++EA  +F EI+ AYE+LSD   R+ YD +G  G+ Q +             +DIF +FFGGG        +  +G D+   L+ TLE+ + G
Sbjct:    4 KCYYEILNVSKTASGVEIKRAYRKLAMEYHPDRNPGDKEAEIKFKEISEAYEILSDDSKRSRYDQFGHAGVNQQSGFGGTGGFG--GFEDIFDTFFGGGTSRGSNRSRASRGSDLEYTLEITLEEAFFG 130          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_FRAT1 (Chaperone protein dnaJ OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.174e-23
Identity = 55/129 (42.64%), Postives = 78/129 (60.47%), Query Frame = 1
Query:  244 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQDIFSSFFGGGPM--EEDEKIVKGDDVIVELDATLEDLYMG 624
            K YYE+L V + AS  +IKRAYRKLA++YHPD+N G++EA  +F EI+ AYE+LSD   R+ YD +G  G+ Q +             +DIF +FFGGG        +  +G D+   L+ TLE+ + G
Sbjct:    4 KCYYEILNVSKTASGVEIKRAYRKLAMEYHPDRNPGDKEAEIKFKEISEAYEILSDDSKRSRYDQFGHAGVNQQSGFGGTGGFG--GFEDIFDTFFGGGTSRGSNRSRASRGSDLEYTLEITLEEAFFG 130          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_SULNB (Chaperone protein dnaJ OS=Sulfurovum sp. (strain NBC37-1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.451e-23
Identity = 51/97 (52.58%), Postives = 66/97 (68.04%), Query Frame = 1
Query:  250 YYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQDIFSSFFGGG 540
            YYEVL+V R  S  ++K+AYRKLALKYHPD+N  ++EA ++F  +N AY+VLSD E R IYD YG+EGL+              +I DIF+S FGGG
Sbjct:    6 YYEVLEVSRDCSGAELKKAYRKLALKYHPDRNPDDQEAEEKFKIVNEAYQVLSDDEKRTIYDRYGKEGLEGQGMGGGFGGANMDDIMDIFNSMFGGG 102          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNJ20_CAEBR (DnaJ homolog dnj-20 OS=Caenorhabditis briggsae GN=dnj-20 PE=4 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.214e-22
Identity = 63/158 (39.87%), Postives = 92/158 (58.23%), Query Frame = 1
Query:  232 VIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQDIFSSFF-----GGGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREK-ML*ASPRQRRCN 687
            V  G+ +Y++L V + A+  QIK+AYRK A + HPD+N  +E AN++F +++ AYEVLSD E R +YD +GEEG+ +                D FSSFF     GGG    DE   KG DV ++L  TLE+ Y G  +++ R+K +   +   R+CN
Sbjct:   19 VECGRDFYKILGVSKNANANQIKKAYRKQAKELHPDRNPDDEMANEKFQDLSAAYEVLSDKEKRAMYDRHGEEGVAKMGGGGGGG-------HDPFSSFFGDFFGGGGGNGGDEGTPKGADVTIDLFVTLEEAYNGHFVEIKRKKAVYKQTSGTRQCN 169          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_MACCJ (Chaperone protein dnaJ OS=Macrococcus caseolyticus (strain JCSC5402) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.214e-22
Identity = 55/135 (40.74%), Postives = 80/135 (59.26%), Query Frame = 1
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQDIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKV 639
            +A + YYEVL + +GAS E+IKRAY+KL+ KYHPD N+   +A  +F EI  AYEVLSD + +  YD +G  G+ Q A             +DIFSSFFGGG   +     +G+D+  +++ T E+   G   ++
Sbjct:    1 MAKRDYYEVLGLSKGASKEEIKRAYKKLSKKYHPDINK-EADAEDKFKEIAEAYEVLSDDQKKAQYDQFGHAGMGQGAGFGGQDFGGFGGFEDIFSSFFGGGARRDPNAPRQGNDLQYQMNVTFEEAVFGAEKEI 134          
The following BLAST results are available for this feature:
BLAST of CX296527 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ1_CERAE3.196e-2344.44DnaJ homolog subfamily A member 1 OS=Cercopithecus... [more]
DNJA1_BOVIN4.174e-2344.44DnaJ homolog subfamily A member 1 OS=Bos taurus GN... [more]
DNAJ_WOLTR4.174e-2345.52Chaperone protein dnaJ OS=Wolbachia sp. subsp. Bru... [more]
DNAJ_MANSM4.174e-2339.26Chaperone protein dnaJ OS=Mannheimia succiniciprod... [more]
DNAJ_FRATW4.174e-2342.64Chaperone protein dnaJ OS=Francisella tularensis s... [more]
DNAJ_FRATT4.174e-2342.64Chaperone protein dnaJ OS=Francisella tularensis s... [more]
DNAJ_FRAT14.174e-2342.64Chaperone protein dnaJ OS=Francisella tularensis s... [more]
DNAJ_SULNB5.451e-2352.58Chaperone protein dnaJ OS=Sulfurovum sp. (strain N... [more]
DNJ20_CAEBR1.214e-2239.87DnaJ homolog dnj-20 OS=Caenorhabditis briggsae GN=... [more]
DNAJ_MACCJ1.214e-2240.74Chaperone protein dnaJ OS=Macrococcus caseolyticus... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC05142E07SK FerrChloL1 Citrus clementina cDNA clone C05142E07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296527 ID=CX296527; Name=CX296527; organism=Citrus clementina; type=EST; length=688bp
GAGGCCTCGTCCCGAATTCGGCACGAGGCAGCAACGACTTCTGAATTGAC
AGATAAAAATTAAAAAGAAAAAAATTATTGTAATCTCAGAATTTTGCTAA
GATCTGAAAATTAAACCCTAGATTCTAAGTTTCGGAGAGGCATTAAACTC
TCTCCTCTTGTTGATCTATTAATGGCGCATCGGCGAGCAAGGCTGTTGTT
CCTATTGTGCGCACTTTGTTACGCCCTCAACGTCATTGCGGGGAAGAGCT
ACTATGAAGTATTGCAAGTGCCGAGGGGAGCATCGGACGAGCAGATCAAA
AGAGCGTATAGAAAGCTGGCATTGAAGTATCATCCTGATAAAAACCAGGG
GAATGAAGAAGCTAATAAGCGATTTGCTGAGATTAACAATGCGTATGAGG
TGTTATCGGATAGCGAAACGAGGAATATATATGATACATATGGAGAAGAG
GGACTGAAACAGCATGCTGCTGGTGGAGGCAGAGGTGGAGGGATGGGAGT
TAACATTCAAGACATTTTCAGCTCTTTCTTTGGTGGAGGTCCAATGGAAG
AGGATGAGAAAATTGTGAAGGGTGATGATGTTATTGTTGAACTGGATGCA
ACATTGGAAGATTTATACATGGGAGGTTCCCTAAAGGTATGGAGAGAGAA
AATGTTATAAGCCAGCCCCAGGCAAAGGCGCTGTAACT
back to top