CX296527

Overview
NameCX296527
Unique NameCX296527
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length688
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_PSEMY (Chaperone protein dnaJ OS=Pseudomonas mendocina (strain ymp) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.586e-22
Identity = 56/139 (40.29%), Postives = 79/139 (56.83%), Query Frame = 1
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQDI----FSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKV 639
            +A + YYEVL V RGAS+ ++K+AYR+LA+KYHPD+N  ++ A ++F E N AYEVLSD+  R+ YD YG  G+               N  DI    FS FFGGG         +G D+   L+  LE+   G ++ +
Sbjct:    1 MAKRDYYEVLGVERGASEAELKKAYRRLAMKYHPDRNPDDKGAEEKFKEANEAYEVLSDAGKRSAYDQYGHAGVDPQMGGGGGAGFGGANFSDIFGDVFSDFFGGGRGGSRGGAQRGSDLRYTLELDLEEAVRGTTVTI 139          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_CAMJR (Chaperone protein dnaJ OS=Campylobacter jejuni (strain RM1221) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.586e-22
Identity = 60/134 (44.78%), Postives = 79/134 (58.96%), Query Frame = 1
Query:  247 SYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHA-AXXXXXXXXXVNIQDIFSSFFGGG-------PMEEDEKIVKGDDVIVELDATLEDLYMG 624
            SYYE+L++ + A  E IK+AYRK+ALKYHPD+NQG++EA  +F  +N AYEVLS+ E R IYD YG++ LK               ++ DIFSSFFG G           DEKI    D IV L  + ++   G
Sbjct:    4 SYYEILEITQNADKETIKKAYRKMALKYHPDRNQGDKEAEDKFKLVNEAYEVLSNDEKRAIYDRYGKDALKGGGFGSSSSGFGGFEDLGDIFSSFFGEGFGSSRRRKSSNDEKI--PSDFIVNLKLSFKEAVFG 135          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_CAMJE (Chaperone protein dnaJ OS=Campylobacter jejuni GN=dnaJ PE=3 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 1.586e-22
Identity = 60/134 (44.78%), Postives = 79/134 (58.96%), Query Frame = 1
Query:  247 SYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHA-AXXXXXXXXXVNIQDIFSSFFGGG-------PMEEDEKIVKGDDVIVELDATLEDLYMG 624
            SYYE+L++ + A  E IK+AYRK+ALKYHPD+NQG++EA  +F  +N AYEVLS+ E R IYD YG++ LK               ++ DIFSSFFG G           DEKI    D IV L  + ++   G
Sbjct:    4 SYYEILEITQNADKETIKKAYRKMALKYHPDRNQGDKEAEDKFKLVNEAYEVLSNDEKRAIYDRYGKDALKGGGFGSSSSGFGGFEDLGDIFSSFFGEGFGSSRRRKSSNDEKI--PSDFIVNLKLSFKEAVFG 135          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_THICR (Chaperone protein dnaJ OS=Thiomicrospira crunogena (strain XCL-2) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.071e-22
Identity = 54/132 (40.91%), Postives = 76/132 (57.58%), Query Frame = 1
Query:  244 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQDIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKV 639
            + YYE+L+V   AS+ +IK+AYRKLA++YHPD+N  +EEA  +F E + AYEVLSD++ R  YD +G  G+   A           +  DIF   FGGG          G D+  EL+ +LED   G ++ V
Sbjct:    4 RDYYEILEVSATASEGEIKKAYRKLAMRYHPDRNPDDEEAEDKFKEASEAYEVLSDAQKRQAYDQFGHAGVDGSAGQGGFGGGGFADFGDIFGDIFGGGFGGGHRGPQPGSDLQYELEVSLEDAVAGTTVDV 135          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_PSEAE (Chaperone protein dnaJ OS=Pseudomonas aeruginosa GN=dnaJ PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.071e-22
Identity = 57/141 (40.43%), Postives = 80/141 (56.74%), Query Frame = 1
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQDI----FSSFFGGGPMEEDEK--IVKGDDVIVELDATLEDLYMGGSLKV 639
            +A + +YEVL V RGAS+  +K+AYR+LA+KYHPD+N G++EA  +F E N AYEVLSD+  R  YD YG  G+  +            +  DI    FS FFGGG      +    +G D+   LD  LE+   G ++ +
Sbjct:    1 MAKRDFYEVLGVERGASEADLKKAYRRLAMKYHPDRNPGDKEAEDKFKEANEAYEVLSDASKRAAYDQYGHAGVDPNMGGGAGAGFGGASFSDIFGDVFSDFFGGGGARGGSRGGAQRGADLRYTLDLDLEEAVRGTTVTI 141          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_PSEAB (Chaperone protein dnaJ OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.071e-22
Identity = 57/141 (40.43%), Postives = 80/141 (56.74%), Query Frame = 1
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQDI----FSSFFGGGPMEEDEK--IVKGDDVIVELDATLEDLYMGGSLKV 639
            +A + +YEVL V RGAS+  +K+AYR+LA+KYHPD+N G++EA  +F E N AYEVLSD+  R  YD YG  G+  +            +  DI    FS FFGGG      +    +G D+   LD  LE+   G ++ +
Sbjct:    1 MAKRDFYEVLGVERGASEADLKKAYRRLAMKYHPDRNPGDKEAEDKFKEANEAYEVLSDASKRAAYDQYGHAGVDPNMGGGAGAGFGGASFSDIFGDVFSDFFGGGGARGGSRGGAQRGADLRYTLDLDLEEAVRGTTVTI 141          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_PSEA8 (Chaperone protein dnaJ OS=Pseudomonas aeruginosa (strain LESB58) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.071e-22
Identity = 57/141 (40.43%), Postives = 80/141 (56.74%), Query Frame = 1
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQDI----FSSFFGGGPMEEDEK--IVKGDDVIVELDATLEDLYMGGSLKV 639
            +A + +YEVL V RGAS+  +K+AYR+LA+KYHPD+N G++EA  +F E N AYEVLSD+  R  YD YG  G+  +            +  DI    FS FFGGG      +    +G D+   LD  LE+   G ++ +
Sbjct:    1 MAKRDFYEVLGVERGASEADLKKAYRRLAMKYHPDRNPGDKEAEDKFKEANEAYEVLSDASKRAAYDQYGHAGVDPNMGGGAGAGFGGASFSDIFGDVFSDFFGGGGARGGSRGGAQRGADLRYTLDLDLEEAVRGTTVTI 141          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_CLONN (Chaperone protein dnaJ OS=Clostridium novyi (strain NT) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.071e-22
Identity = 56/133 (42.11%), Postives = 77/133 (57.89%), Query Frame = 1
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLK--QHAAXXXXXXXXXVNIQDIFSSFFGGG-PMEEDEKIVKGDDVIVELDATLEDLYMG 624
            +A K YYEVL + +GASD++IK+AYRKLA+KYHPD+NQGN+EA ++F +IN AY+VLSD + +  YD +G                       +DIF SFFGGG          +G D+   +  T E+   G
Sbjct:    1 MASKDYYEVLGLSKGASDDEIKKAYRKLAMKYHPDRNQGNKEAEEKFKDINEAYQVLSDPQKKANYDQFGSADFNGGGFGGFGGGGFSGMGGFEDIFDSFFGGGFSSRRRNGPERGADLEYTVSLTFEEAVFG 133          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_CLOAB (Chaperone protein dnaJ OS=Clostridium acetobutylicum GN=dnaJ PE=2 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 2.071e-22
Identity = 56/137 (40.88%), Postives = 81/137 (59.12%), Query Frame = 1
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHA--AXXXXXXXXXVNIQDIFSSFFGGG-----PMEEDEKIVKGDDVIVELDATLEDLYMG 624
            +A K YYEVL + +GASD++IK+A+RKLA+KYHPDKN+GN+EA ++F EIN AY+VLSD + +  YD +G                     ++ DIF+SFFGGG          +   +G+D+   +  T E+   G
Sbjct:    1 MANKDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNRGNKEAEEKFKEINEAYQVLSDPDKKANYDRFGTADFNGGGGFGDFSGGFGDFGDLGDIFNSFFGGGFSGGSSRARKDAPQRGNDMEYSISLTFEEAVFG 137          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_CAMJ8 (Chaperone protein dnaJ OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.071e-22
Identity = 60/135 (44.44%), Postives = 79/135 (58.52%), Query Frame = 1
Query:  247 SYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHA-AXXXXXXXXXVNIQDIFSSFFGGG--------PMEEDEKIVKGDDVIVELDATLEDLYMG 624
            SYYE+L++ + A  E IK+AYRK+ALKYHPD+NQG++EA  +F  +N AYEVLS+ E R IYD YG++ LK               ++ DIFSSFFG G            DEKI    D IV L  + ++   G
Sbjct:    4 SYYEILEITQSADKETIKKAYRKMALKYHPDRNQGDKEAEDKFKLVNEAYEVLSNDEKRAIYDRYGKDALKGGGFGSSSSGFGGFEDLGDIFSSFFGEGFGSSSRRRKSSNDEKI--PSDFIVNLKLSFKEAVFG 136          
The following BLAST results are available for this feature:
BLAST of CX296527 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_PSEMY1.586e-2240.29Chaperone protein dnaJ OS=Pseudomonas mendocina (s... [more]
DNAJ_CAMJR1.586e-2244.78Chaperone protein dnaJ OS=Campylobacter jejuni (st... [more]
DNAJ_CAMJE1.586e-2244.78Chaperone protein dnaJ OS=Campylobacter jejuni GN=... [more]
DNAJ_THICR2.071e-2240.91Chaperone protein dnaJ OS=Thiomicrospira crunogena... [more]
DNAJ_PSEAE2.071e-2240.43Chaperone protein dnaJ OS=Pseudomonas aeruginosa G... [more]
DNAJ_PSEAB2.071e-2240.43Chaperone protein dnaJ OS=Pseudomonas aeruginosa (... [more]
DNAJ_PSEA82.071e-2240.43Chaperone protein dnaJ OS=Pseudomonas aeruginosa (... [more]
DNAJ_CLONN2.071e-2242.11Chaperone protein dnaJ OS=Clostridium novyi (strai... [more]
DNAJ_CLOAB2.071e-2240.88Chaperone protein dnaJ OS=Clostridium acetobutylic... [more]
DNAJ_CAMJ82.071e-2244.44Chaperone protein dnaJ OS=Campylobacter jejuni sub... [more]

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Properties
Property NameValue
Genbank descriptionC05142E07SK FerrChloL1 Citrus clementina cDNA clone C05142E07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296527 ID=CX296527; Name=CX296527; organism=Citrus clementina; type=EST; length=688bp
GAGGCCTCGTCCCGAATTCGGCACGAGGCAGCAACGACTTCTGAATTGAC
AGATAAAAATTAAAAAGAAAAAAATTATTGTAATCTCAGAATTTTGCTAA
GATCTGAAAATTAAACCCTAGATTCTAAGTTTCGGAGAGGCATTAAACTC
TCTCCTCTTGTTGATCTATTAATGGCGCATCGGCGAGCAAGGCTGTTGTT
CCTATTGTGCGCACTTTGTTACGCCCTCAACGTCATTGCGGGGAAGAGCT
ACTATGAAGTATTGCAAGTGCCGAGGGGAGCATCGGACGAGCAGATCAAA
AGAGCGTATAGAAAGCTGGCATTGAAGTATCATCCTGATAAAAACCAGGG
GAATGAAGAAGCTAATAAGCGATTTGCTGAGATTAACAATGCGTATGAGG
TGTTATCGGATAGCGAAACGAGGAATATATATGATACATATGGAGAAGAG
GGACTGAAACAGCATGCTGCTGGTGGAGGCAGAGGTGGAGGGATGGGAGT
TAACATTCAAGACATTTTCAGCTCTTTCTTTGGTGGAGGTCCAATGGAAG
AGGATGAGAAAATTGTGAAGGGTGATGATGTTATTGTTGAACTGGATGCA
ACATTGGAAGATTTATACATGGGAGGTTCCCTAAAGGTATGGAGAGAGAA
AATGTTATAAGCCAGCCCCAGGCAAAGGCGCTGTAACT
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