CX296527

Overview
NameCX296527
Unique NameCX296527
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length688
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_ANAMM (Chaperone protein dnaJ OS=Anaplasma marginale (strain St. Maries) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.071e-22
Identity = 53/135 (39.26%), Postives = 80/135 (59.26%), Query Frame = 1
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQ-HAAXXXXXXXXXVNIQDIFSSFFGGG----PMEEDEKIVKGDDVIVELDATLEDLYMG 624
            ++G  YYE+L+V R AS E+IK++YRK+  KYHPDKN G+++A ++F +I+ AYEVLS+ E R  YD YG        A+          +  DIF  FFGGG          + ++G D+  +++ +LED + G
Sbjct:    1 MSGNDYYEILEVSRNASAEEIKKSYRKMVFKYHPDKNPGDKKAEEKFKKISEAYEVLSNPEKRAAYDRYGHSTFTSGGASGFDFTSGFSTDFSDIFQDFFGGGFGKSQRASSREHLRGSDLRYDVEVSLEDAFKG 135          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_ANAMF (Chaperone protein dnaJ OS=Anaplasma marginale (strain Florida) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.071e-22
Identity = 53/135 (39.26%), Postives = 80/135 (59.26%), Query Frame = 1
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQ-HAAXXXXXXXXXVNIQDIFSSFFGGG----PMEEDEKIVKGDDVIVELDATLEDLYMG 624
            ++G  YYE+L+V R AS E+IK++YRK+  KYHPDKN G+++A ++F +I+ AYEVLS+ E R  YD YG        A+          +  DIF  FFGGG          + ++G D+  +++ +LED + G
Sbjct:    1 MSGNDYYEILEVSRNASAEEIKKSYRKMVFKYHPDKNPGDKKAEEKFKKISEAYEVLSNPEKRAAYDRYGHSTFTSGGASGFDFTSGFSTDFSDIFQDFFGGGFGKSQRASSREHLRGSDLRYDVEVSLEDAFKG 135          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_METSS (Chaperone protein dnaJ OS=Methylovorus sp. (strain SS1 / DSM 11726) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.705e-22
Identity = 56/128 (43.75%), Postives = 72/128 (56.25%), Query Frame = 1
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXV--NIQDIFSSFFGGGPMEEDEKIVKGDDVIVELDATLED 612
            +A K YYEVL V R ASDE+IK++YRKLA+KYHPD+N  N +A + F E   AYEVLSD + R  YD YG  G+   A                DIF   FGGG       + +G D+   ++ +LED
Sbjct:    1 MAKKDYYEVLGVNRDASDEEIKKSYRKLAMKYHPDRNPDNPKAEESFKEAKEAYEVLSDEQKRAAYDQYGHAGVDPSAGPGPRQGFGNFADAFGDIFGDIFGGGGGNRRSNVYRGADLRYNMEISLED 128          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_METFK (Chaperone protein dnaJ OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.705e-22
Identity = 57/138 (41.30%), Postives = 76/138 (55.07%), Query Frame = 1
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHA---AXXXXXXXXXVNIQDIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKV 639
            +A + YYEVL V R A+DE+IK+AYRKLA+KYHPD+N  N +A + F E   AYEVLSD + R  YD YG  G+   A   A             DIF   FGGG       + +G D+   ++ +LE+   G   K+
Sbjct:    1 MAKRDYYEVLGVNRDATDEEIKKAYRKLAMKYHPDRNPDNPKAEEHFKEAKEAYEVLSDDQKRAAYDQYGHAGVDPSAAAGAGAGGFGNFADAFGDIFGDIFGGGGGGRRSNVYRGADLRYNMEISLEEAARGTETKI 138          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_LEPBP (Chaperone protein dnaJ OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.705e-22
Identity = 59/147 (40.14%), Postives = 82/147 (55.78%), Query Frame = 1
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLK------QHAAXXXXXXXXXVNIQDIFSSFFGGG------PMEEDEKIVKGDDVIVELDATLEDLYMGGSLKV 639
            ++ + YYEVL V +GASD++IK AYRKLA+KYHPDKN+G++EA ++F E   AYEVL D + R  YD +G+ G+         A           +  DIFS FFGGG               +G D+   L+ +LED  +G   K+
Sbjct:    1 MSDRGYYEVLGVSKGASDDEIKSAYRKLAIKYHPDKNKGDKEAEEKFKEATEAYEVLRDPQKRQAYDQFGKAGVNAGAGGGYGAGAYTDFSDIFGDFGDIFSEFFGGGGGGGSRGGGRRSGPQRGSDLRYNLEVSLEDAALGKEYKI 147          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_LEPBA (Chaperone protein dnaJ OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.705e-22
Identity = 59/147 (40.14%), Postives = 82/147 (55.78%), Query Frame = 1
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLK------QHAAXXXXXXXXXVNIQDIFSSFFGGG------PMEEDEKIVKGDDVIVELDATLEDLYMGGSLKV 639
            ++ + YYEVL V +GASD++IK AYRKLA+KYHPDKN+G++EA ++F E   AYEVL D + R  YD +G+ G+         A           +  DIFS FFGGG               +G D+   L+ +LED  +G   K+
Sbjct:    1 MSDRGYYEVLGVSKGASDDEIKSAYRKLAIKYHPDKNKGDKEAEEKFKEATEAYEVLRDPQKRQAYDQFGKAGVNAGAGGGYGAGAYTDFSDIFGDFGDIFSEFFGGGGGGGSRGGGRRSGPQRGSDLRYNLEVSLEDAALGKEYKI 147          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_HAEDU (Chaperone protein dnaJ OS=Haemophilus ducreyi GN=dnaJ PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.705e-22
Identity = 52/134 (38.81%), Postives = 83/134 (61.94%), Query Frame = 1
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAA--XXXXXXXXXVNIQDIFSSFFGG--GPMEEDEKIVKGDDVIVELDATLEDLYMG 624
            +A K YYEVL + +GA+++ IKRAY++LA KYHPDKNQG++++ ++F +I  AYE+L+D + R  YD YG    +Q ++              +DIFS  FGG  G     + +V+G D+  +++ +LE+   G
Sbjct:    1 MAKKDYYEVLGLQKGATEKDIKRAYKRLAAKYHPDKNQGSKDSEEKFKQITEAYEILTDDQKRAAYDQYGHAAFEQGSSNGGFNGFGGGFGGFEDIFSEMFGGGFGGGSRRQHVVRGQDLRYDIEISLEEAVKG 134          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_CLOBA (Chaperone protein dnaJ OS=Clostridium botulinum (strain Alaska E43 / Type E3) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.705e-22
Identity = 57/132 (43.18%), Postives = 76/132 (57.58%), Query Frame = 1
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXV-NIQDIFSSFFGGGPMEEDEK-IVKGDDVIVELDATLEDLYMG 624
            +A K YYEVL + +GASD++IK+A+RKLA+KYHPDKN+GN EA ++F EIN AY+VLSD E ++ YD +G                  +    DIF  F GGG         V G+D+   L  T E+   G
Sbjct:    1 MANKDYYEVLGLQKGASDDEIKKAFRKLAIKYHPDKNKGNTEAEEKFKEINEAYQVLSDPEKKSNYDQFGSADFNGGGFGSGGFGGFDMGGFGDIFDMFTGGGSSTRRRNGPVNGNDIEYTLTLTFEEAVFG 132          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_AZOVD (Chaperone protein dnaJ OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.705e-22
Identity = 55/139 (39.57%), Postives = 78/139 (56.12%), Query Frame = 1
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQDI----FSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKV 639
            +A + YYEVL V RGA + ++K+AYR+LA+KYHPD+N  ++ A ++F E+N AYEVLSD+  R  YD YG  G+ Q             N  DI    FS FFG G         +G D+   L+  LE+   G ++ +
Sbjct:    1 MAKRDYYEVLGVERGAGEAELKKAYRRLAMKYHPDRNPDDKSAEEKFKEVNEAYEVLSDAGKRMAYDQYGHAGVDQSMGGGAGFGAGGANFSDIFGDVFSDFFGAGRAGARGGPQRGSDLRYTLELNLEEAVRGTTVTI 139          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ3_ARATH (Chaperone protein dnaJ 3 OS=Arabidopsis thaliana GN=ATJ3 PE=1 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 2.705e-22
Identity = 59/134 (44.03%), Postives = 78/134 (58.21%), Query Frame = 1
Query:  250 YYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQDIFSSFFGGGPM----EEDEKIVKGDDVIVELDATLEDLYMGGSLKV 639
            +YE+L VP+ AS E +K+AY+K A+K HPDK    E    +F E+  AYEVLSD E R IYD YGE+ LK+                DIFSSFFGGGP         +  +G+DV+  L  +LED+Y+G   K+
Sbjct:   15 FYEILGVPKSASPEDLKKAYKKAAIKNHPDKGGDPE----KFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGGGGHDPF----DIFSSFFGGGPFGGNTSRQRRQRRGEDVVHPLKVSLEDVYLGTMKKL 140          
The following BLAST results are available for this feature:
BLAST of CX296527 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_ANAMM2.071e-2239.26Chaperone protein dnaJ OS=Anaplasma marginale (str... [more]
DNAJ_ANAMF2.071e-2239.26Chaperone protein dnaJ OS=Anaplasma marginale (str... [more]
DNAJ_METSS2.705e-2243.75Chaperone protein dnaJ OS=Methylovorus sp. (strain... [more]
DNAJ_METFK2.705e-2241.30Chaperone protein dnaJ OS=Methylobacillus flagella... [more]
DNAJ_LEPBP2.705e-2240.14Chaperone protein dnaJ OS=Leptospira biflexa serov... [more]
DNAJ_LEPBA2.705e-2240.14Chaperone protein dnaJ OS=Leptospira biflexa serov... [more]
DNAJ_HAEDU2.705e-2238.81Chaperone protein dnaJ OS=Haemophilus ducreyi GN=d... [more]
DNAJ_CLOBA2.705e-2243.18Chaperone protein dnaJ OS=Clostridium botulinum (s... [more]
DNAJ_AZOVD2.705e-2239.57Chaperone protein dnaJ OS=Azotobacter vinelandii (... [more]
DNAJ3_ARATH2.705e-2244.03Chaperone protein dnaJ 3 OS=Arabidopsis thaliana G... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC05142E07SK FerrChloL1 Citrus clementina cDNA clone C05142E07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296527 ID=CX296527; Name=CX296527; organism=Citrus clementina; type=EST; length=688bp
GAGGCCTCGTCCCGAATTCGGCACGAGGCAGCAACGACTTCTGAATTGAC
AGATAAAAATTAAAAAGAAAAAAATTATTGTAATCTCAGAATTTTGCTAA
GATCTGAAAATTAAACCCTAGATTCTAAGTTTCGGAGAGGCATTAAACTC
TCTCCTCTTGTTGATCTATTAATGGCGCATCGGCGAGCAAGGCTGTTGTT
CCTATTGTGCGCACTTTGTTACGCCCTCAACGTCATTGCGGGGAAGAGCT
ACTATGAAGTATTGCAAGTGCCGAGGGGAGCATCGGACGAGCAGATCAAA
AGAGCGTATAGAAAGCTGGCATTGAAGTATCATCCTGATAAAAACCAGGG
GAATGAAGAAGCTAATAAGCGATTTGCTGAGATTAACAATGCGTATGAGG
TGTTATCGGATAGCGAAACGAGGAATATATATGATACATATGGAGAAGAG
GGACTGAAACAGCATGCTGCTGGTGGAGGCAGAGGTGGAGGGATGGGAGT
TAACATTCAAGACATTTTCAGCTCTTTCTTTGGTGGAGGTCCAATGGAAG
AGGATGAGAAAATTGTGAAGGGTGATGATGTTATTGTTGAACTGGATGCA
ACATTGGAAGATTTATACATGGGAGGTTCCCTAAAGGTATGGAGAGAGAA
AATGTTATAAGCCAGCCCCAGGCAAAGGCGCTGTAACT
back to top