CX296527

Overview
NameCX296527
Unique NameCX296527
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length688
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_SYNFM (Chaperone protein dnaJ OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.615e-22
Identity = 58/137 (42.34%), Postives = 80/137 (58.39%), Query Frame = 1
Query:  244 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQDIFSSF---------FGGGPMEEDEKIVK-GDDVIVELDATLEDLYMG 624
            + YYE+L V R AS+E+IK+AYRKLALKYHPD+N G++++ + F E   AYEVL D++ + IYDTYG EGL+                +DIFSSF         FG G   +     + GDD++ +L  T E+   G
Sbjct:    4 RDYYEILGVTRQASEEEIKKAYRKLALKYHPDRNPGDKDSEELFKEAAEAYEVLHDAQKKRIYDTYGHEGLR------GTGFSGFRGFEDIFSSFGDVFQEFFNFGFGAGGQSRTAARPGDDLLYDLSLTFEEAVFG 134          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_PSEA7 (Chaperone protein dnaJ OS=Pseudomonas aeruginosa (strain PA7) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.615e-22
Identity = 57/141 (40.43%), Postives = 80/141 (56.74%), Query Frame = 1
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQDI----FSSFFGGGPMEEDEK--IVKGDDVIVELDATLEDLYMGGSLKV 639
            +A + +YEVL V RGAS+  +K+AYR+LA+KYHPD+N G++EA  +F E N AYEVLSD+  R  YD YG  G+  +            +  DI    FS FFGGG      +    +G D+   LD  LE+   G ++ +
Sbjct:    1 MAKRDFYEVLGVERGASEADLKKAYRRLAMKYHPDRNPGDKEAEDKFKEANEAYEVLSDASKRAAYDQYGHAGVDPNMGGGAGAGFGGASFSDIFGDVFSDFFGGGGGRGGARGGAQRGADLRYTLDLDLEEAVRGTTVTI 141          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_CLOTE (Chaperone protein dnaJ OS=Clostridium tetani GN=dnaJ PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.615e-22
Identity = 59/133 (44.36%), Postives = 75/133 (56.39%), Query Frame = 1
Query:  244 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQDIFSSFFG------GGPMEEDEKIVKGDDVIVELDATLEDLYMG 624
            K +YEVL V +GA+D +IK+A+RKLALKYHPDKN GN+EA +RF EIN AY+VLSD + R  YD +G        A          ++ DIF SFFG      GG         KG DV   ++ T  +   G
Sbjct:    4 KDFYEVLGVEKGANDAEIKKAFRKLALKYHPDKNAGNKEAEERFKEINEAYQVLSDPQKRAQYDQFGTADFNGGGA--GFSGFEDFDLGDIFESFFGGGFGGFGGSSRRRNGPQKGPDVQYSINLTFNEAVFG 134          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: MAS5_SCHPO (Mitochondrial protein import protein mas5 OS=Schizosaccharomyces pombe GN=SPBC1734.11 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.027e-22
Identity = 62/137 (45.26%), Postives = 82/137 (59.85%), Query Frame = 1
Query:  253 YEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQDIFSSFFG----GGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREK 651
            YEVL V   AS  ++K+AYRKLALKYHPDK   N  A  +F EI+ AYE+L+D E R  YD +GEEGL+   A         ++  D+F+SFFG    GG M    +  KG D++  +  TLEDLY G + K+  +K
Sbjct:    8 YEVLNVDVTASQAELKKAYRKLALKYHPDK---NPNAGDKFKEISRAYEILADEEKRATYDRFGEEGLQGGGA------DGGMSADDLFASFFGGGMFGGGMPRGPR--KGKDLVHTIKVTLEDLYRGKTTKLALQK 133          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_METCA (Chaperone protein dnaJ OS=Methylococcus capsulatus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.027e-22
Identity = 54/138 (39.13%), Postives = 76/138 (55.07%), Query Frame = 1
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQDIFSSFFG---GGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKV 639
            +A + YYE L VPR ASD  IK+A+R+LA+KYHPD+N+ N EA +RF  +  AY+VLSD + R+ YD +G  G+               +  DIF   FG   GG      +  +G D+   L+ TLE+   G   K+
Sbjct:    1 MAKEDYYETLGVPRNASDSDIKKAFRRLAMKYHPDRNKDNPEAEERFKSVKEAYDVLSDPKKRSAYDQFGHAGIDPSMGGGGGFGFTGDSFSDIFGDVFGDIFGGGGRRRGRGQRGSDLRYNLELTLEEAVAGTEAKI 138          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_CLOBB (Chaperone protein dnaJ OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.027e-22
Identity = 56/132 (42.42%), Postives = 76/132 (57.58%), Query Frame = 1
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXV-NIQDIFSSFFGGGPMEEDEK-IVKGDDVIVELDATLEDLYMG 624
            +A K YYEVL + +GASD++IK+A+RKLA+KYHPDKN+GN EA ++F EIN AY+VLSD E ++ YD +G                  +    DIF  F GGG         V G+D+   +  T E+   G
Sbjct:    1 MANKDYYEVLGLQKGASDDEIKKAFRKLAIKYHPDKNKGNTEAEEKFKEINEAYQVLSDPEKKSNYDQFGSADFNGGGFGSGGFGGFDMGGFGDIFDMFTGGGSSTRRRNGPVNGNDIEYTVTLTFEEAVFG 132          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_CARHZ (Chaperone protein dnaJ OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.027e-22
Identity = 59/138 (42.75%), Postives = 78/138 (56.52%), Query Frame = 1
Query:  244 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLK-QHAAXXXXXXXXXVNIQDIFSSFFGGGPM---------EEDEKIVKGDDVIVELDATLEDLYMGG 627
            + YYE+L V R A+ E+IK+AYRKLA KYHPD N+ +  A ++F EIN AYEVLSD E R  YD +G  G+    A          +N +DIFS F G G +         +  +  V GDD+   L+ TLE+   GG
Sbjct:    3 RDYYEILGVARNATPEEIKKAYRKLARKYHPDVNKDDPNAAEKFKEINEAYEVLSDPEKRARYDQFGHAGVDGNFAGQGGFGGGAGINFEDIFSGFGGFGDLFDMVFGSGRKARQGPVPGDDIEAVLELTLEEAVFGG 140          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_AGGAC (Chaperone protein dnaJ OS=Aggregatibacter actinomycetemcomitans GN=dnaJ PE=3 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 6.027e-22
Identity = 52/133 (39.10%), Postives = 80/133 (60.15%), Query Frame = 1
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQDIFSSFFG---GGPMEEDEKIVKGDDVIVELDATLEDLYMG 624
            +A + YYE+L + R A +++IKRAY+KLA++YHPD+ +G++E  ++F EI  AYEVL+D E R  YD YG    +Q             +  DIF   FG   GG     +++V+GDD+  +++ TLE+   G
Sbjct:    1 MAKQDYYELLGISRSADEKEIKRAYKKLAMQYHPDRTKGDKEKEEKFKEIQEAYEVLNDKEKRAAYDQYGHAAFEQ-GTGFGGGSFGGADFGDIFGDMFGDIFGGGGRGRQRVVRGDDLRYDIEITLEEAVKG 132          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNJH2_ALLPO (DnaJ protein homolog 2 OS=Allium porrum GN=LDJ2 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 7.872e-22
Identity = 62/135 (45.93%), Postives = 76/135 (56.30%), Query Frame = 1
Query:  250 YYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQDIFSSFFGGGPM-----EEDEKIVKGDDVIVELDATLEDLYMGGSLKV 639
            YYEVL V + A+ E +K+AYRK A+K HPDK    E    +F EI  AYEVL+D E R IYD YGEEGLK+                DIF SFFGGG           +  +G+DV+  L  +LEDLY G S K+
Sbjct:   14 YYEVLGVSKNATPEDLKKAYRKAAIKNHPDKGGDPE----KFKEIGQAYEVLNDPEKREIYDQYGEEGLKEGMGGGGGVHDPF----DIFQSFFGGGGFGGGGSSRGRRQRRGEDVVHPLKVSLEDLYNGTSKKL 140          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_LEPIN (Chaperone protein dnaJ OS=Leptospira interrogans GN=dnaJ PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 7.872e-22
Identity = 55/142 (38.73%), Postives = 79/142 (55.63%), Query Frame = 1
Query:  244 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXV-----NIQDIFSSFFGGGPME-----EDEKIVKGDDVIVELDATLEDLYMGGSLKV 639
            +SYY++L V + A+DE+IK AYRKLA+KYHPDKN+GN+E+ ++F E   AYE+L D + R  YD +G+ G+   A                +  DIF  FFGGG              +G D+   L+ +LED  +G   K+
Sbjct:    4 RSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKESEEKFKEATEAYEILRDPKKRQAYDQFGKAGVSGGAGGFGQGAYTDFSDIFGDFGDIFGDFFGGGRSSGFGGGRRSGPQRGSDLRYNLEVSLEDAALGREYKI 145          
The following BLAST results are available for this feature:
BLAST of CX296527 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_SYNFM4.615e-2242.34Chaperone protein dnaJ OS=Syntrophobacter fumaroxi... [more]
DNAJ_PSEA74.615e-2240.43Chaperone protein dnaJ OS=Pseudomonas aeruginosa (... [more]
DNAJ_CLOTE4.615e-2244.36Chaperone protein dnaJ OS=Clostridium tetani GN=dn... [more]
MAS5_SCHPO6.027e-2245.26Mitochondrial protein import protein mas5 OS=Schiz... [more]
DNAJ_METCA6.027e-2239.13Chaperone protein dnaJ OS=Methylococcus capsulatus... [more]
DNAJ_CLOBB6.027e-2242.42Chaperone protein dnaJ OS=Clostridium botulinum (s... [more]
DNAJ_CARHZ6.027e-2242.75Chaperone protein dnaJ OS=Carboxydothermus hydroge... [more]
DNAJ_AGGAC6.027e-2239.10Chaperone protein dnaJ OS=Aggregatibacter actinomy... [more]
DNJH2_ALLPO7.872e-2245.93DnaJ protein homolog 2 OS=Allium porrum GN=LDJ2 PE... [more]
DNAJ_LEPIN7.872e-2238.73Chaperone protein dnaJ OS=Leptospira interrogans G... [more]

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Properties
Property NameValue
Genbank descriptionC05142E07SK FerrChloL1 Citrus clementina cDNA clone C05142E07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296527 ID=CX296527; Name=CX296527; organism=Citrus clementina; type=EST; length=688bp
GAGGCCTCGTCCCGAATTCGGCACGAGGCAGCAACGACTTCTGAATTGAC
AGATAAAAATTAAAAAGAAAAAAATTATTGTAATCTCAGAATTTTGCTAA
GATCTGAAAATTAAACCCTAGATTCTAAGTTTCGGAGAGGCATTAAACTC
TCTCCTCTTGTTGATCTATTAATGGCGCATCGGCGAGCAAGGCTGTTGTT
CCTATTGTGCGCACTTTGTTACGCCCTCAACGTCATTGCGGGGAAGAGCT
ACTATGAAGTATTGCAAGTGCCGAGGGGAGCATCGGACGAGCAGATCAAA
AGAGCGTATAGAAAGCTGGCATTGAAGTATCATCCTGATAAAAACCAGGG
GAATGAAGAAGCTAATAAGCGATTTGCTGAGATTAACAATGCGTATGAGG
TGTTATCGGATAGCGAAACGAGGAATATATATGATACATATGGAGAAGAG
GGACTGAAACAGCATGCTGCTGGTGGAGGCAGAGGTGGAGGGATGGGAGT
TAACATTCAAGACATTTTCAGCTCTTTCTTTGGTGGAGGTCCAATGGAAG
AGGATGAGAAAATTGTGAAGGGTGATGATGTTATTGTTGAACTGGATGCA
ACATTGGAAGATTTATACATGGGAGGTTCCCTAAAGGTATGGAGAGAGAA
AATGTTATAAGCCAGCCCCAGGCAAAGGCGCTGTAACT
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