CX296527

Overview
NameCX296527
Unique NameCX296527
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length688
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_LEPIC (Chaperone protein dnaJ OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=dnaJ PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 7.872e-22
Identity = 55/142 (38.73%), Postives = 79/142 (55.63%), Query Frame = 1
Query:  244 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXV-----NIQDIFSSFFGGGPME-----EDEKIVKGDDVIVELDATLEDLYMGGSLKV 639
            +SYY++L V + A+DE+IK AYRKLA+KYHPDKN+GN+E+ ++F E   AYE+L D + R  YD +G+ G+   A                +  DIF  FFGGG              +G D+   L+ +LED  +G   K+
Sbjct:    4 RSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKESEEKFKEATEAYEILRDPKKRQAYDQFGKAGVSGGAGGFGQGAYTDFSDIFGDFGDIFGDFFGGGRSSGFGGGRRSGPQRGSDLRYNLEVSLEDAALGREYKI 145          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_ANAPZ (Chaperone protein dnaJ OS=Anaplasma phagocytophilum (strain HZ) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 7.872e-22
Identity = 51/139 (36.69%), Postives = 79/139 (56.83%), Query Frame = 1
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLK-----QHAAXXXXXXXXXVNIQDIFSSFFGGG----PMEEDEKIVKGDDVIVELDATLEDLYMG 624
            +    YY++L V RGAS+E+IK++YRK   +YHPD+N GN+EA ++F +I+ AY+VL+DS+ R  YD YG                        +  DIF+ FFGGG      +   + ++G D+  +++ TLED + G
Sbjct:    1 MGSNDYYDLLGVSRGASEEEIKKSYRKKVFEYHPDRNPGNKEAEEKFKKISEAYDVLTDSDKRAAYDRYGHSAFANGMGGNQGFTGGFDGGFSTDFSDIFNDFFGGGFGKTSRQSSRENMRGSDLRYDIEVTLEDAFKG 139          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNJA4_MOUSE (DnaJ homolog subfamily A member 4 OS=Mus musculus GN=Dnaja4 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.028e-21
Identity = 60/134 (44.78%), Postives = 83/134 (61.94%), Query Frame = 1
Query:  250 YYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQDIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREK 651
            YY++L V   AS E+IK+AYRKLALKYHPDK   N +  ++F  I+ AYEVLSD + R+IYD  GE+ +K+  +          +  DIF  FFGGG     E+  +G +V+ +L  TLEDLY G + K+  +K
Sbjct:    7 YYDILGVKPSASPEEIKKAYRKLALKYHPDK---NPDEGEKFKLISQAYEVLSDPKKRDIYDQGGEQAIKEGGSGSPSFS----SPMDIFDMFFGGGGRMTRER--RGKNVVHQLSVTLEDLYNGITKKLALQK 131          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNJA4_HUMAN (DnaJ homolog subfamily A member 4 OS=Homo sapiens GN=DNAJA4 PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.028e-21
Identity = 59/134 (44.03%), Postives = 83/134 (61.94%), Query Frame = 1
Query:  250 YYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQDIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREK 651
            YY++L V   AS E+IK+AYRKLALKYHPDK   N +  ++F  I+ AYEVLSD + R++YD  GE+ +K+  +          +  DIF  FFGGG     E+  +G +V+ +L  TLEDLY G + K+  +K
Sbjct:    7 YYDILGVKPSASPEEIKKAYRKLALKYHPDK---NPDEGEKFKLISQAYEVLSDPKKRDVYDQGGEQAIKEGGSGSPSFS----SPMDIFDMFFGGGGRMARER--RGKNVVHQLSVTLEDLYNGVTKKLALQK 131          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_THIDA (Chaperone protein dnaJ OS=Thiobacillus denitrificans (strain ATCC 25259) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.028e-21
Identity = 53/135 (39.26%), Postives = 75/135 (55.56%), Query Frame = 1
Query:  244 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHA---AXXXXXXXXXVNIQDIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKV 639
            + YYEVL V + ASDE+IK+AYRKLA+K+HPD+N G+  A  +F E   AYE+LSDS+ R  YD +G  G+   +                 DIF   FGGG     +++ +G D+   L+  LE+   G   K+
Sbjct:    4 RDYYEVLGVAKNASDEEIKKAYRKLAMKHHPDRNPGDHAAEDKFKEAKQAYEILSDSDKRAAYDQFGHAGVDPQSGMGGGGFGGGGFSDAFSDIFGDIFGGGGGNRRDRVYRGADLRYNLEIGLEEAARGTETKI 138          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_FRAP2 (Chaperone protein dnaJ OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.028e-21
Identity = 53/129 (41.09%), Postives = 76/129 (58.91%), Query Frame = 1
Query:  244 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQDIFSSFFGGGPM--EEDEKIVKGDDVIVELDATLEDLYMG 624
            K YYE+L V + AS  +IKRAYRKLA+KYHPD+N  ++EA  +F EI+ AYE+LSD   R+ YD +G  G+ Q               +DIF +FFGGG        +  +G D+   ++ +LE+ + G
Sbjct:    4 KCYYEILNVSKTASGVEIKRAYRKLAMKYHPDRNPDDKEAEIKFKEISEAYEILSDDGKRSRYDQFGHAGVNQQGGAGSAGGFG--GFEDIFDTFFGGGTSRGSNRSRASRGSDLEYTIEISLEEAFFG 130          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_BORBU (Chaperone protein dnaJ OS=Borrelia burgdorferi GN=dnaJ PE=2 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 1.028e-21
Identity = 54/133 (40.60%), Postives = 76/133 (57.14%), Query Frame = 1
Query:  244 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEE-----GLKQHAAXXXXXXXXXVNIQDIFSSFFGGGP-MEEDEKIVKGDDVIVELDATLEDLYMG 624
            K YYE+L + +GAS ++IK+AYRK+A+KYHPD+NQGNEEA   F E   AYE+L D   +  YD +G       G +  +           +  DIF SFF G    E + K  KG+D+   ++ +LE+ Y G
Sbjct:    3 KDYYEILGLSKGASKDEIKKAYRKIAIKYHPDRNQGNEEAASIFKEATQAYEILIDDNKKAKYDRFGHSAFEGGGFEGFSGGFSGFSDIFEDFGDIFDSFFTGNKGQERNRKHAKGEDLGYNIEISLENAYFG 135          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_CAMJJ (Chaperone protein dnaJ OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.343e-21
Identity = 59/135 (43.70%), Postives = 78/135 (57.78%), Query Frame = 1
Query:  247 SYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHA-AXXXXXXXXXVNIQDIFSSFFGGG--------PMEEDEKIVKGDDVIVELDATLEDLYMG 624
            SYYE+L++ + A  E IK+AYRK+ALKYHPD+NQG++EA  +F  +N AYEVLS+ E R IYD YG++ LK               ++ DIFSSFFG G            DEKI    D I  L  + ++   G
Sbjct:    4 SYYELLEITQNADKETIKKAYRKMALKYHPDRNQGDKEAEDKFKLVNEAYEVLSNDEKRAIYDRYGKDALKGGGFGSNSSGFGGFEDLGDIFSSFFGEGFGSSSRRRKSSNDEKI--PSDFIFNLKLSFKEAVFG 136          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_CAMHC (Chaperone protein dnaJ OS=Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.343e-21
Identity = 49/97 (50.52%), Postives = 65/97 (67.01%), Query Frame = 1
Query:  250 YYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQDIFSSFFGGG 540
            YYE+L VP+ A  ++IK+A+RKLALKYHPD+N G++EA ++F EIN AY+VL + E R  YD YG+EGL               +  DIF +FFGGG
Sbjct:    4 YYEILGVPKDADSDEIKKAFRKLALKYHPDRNAGDKEAEEKFKEINEAYQVLGNDERRQTYDRYGKEGLN----GAFGNDFGGFDFGDIFDTFFGGG 96          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_PHOLL (Chaperone protein dnaJ OS=Photorhabdus luminescens subsp. laumondii GN=dnaJ PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.754e-21
Identity = 50/130 (38.46%), Postives = 78/130 (60.00%), Query Frame = 1
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQDIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMG 624
            +A + YYEVL V + AS+++IK+AY++LA+KYHPD+NQG++EA  +F E+  AYE+L+D + R  YD YG    +Q            +   D+F   FGGG     ++  +G D+   ++ TLE+   G
Sbjct:    1 MAKRDYYEVLGVSKTASEKEIKKAYKRLAMKYHPDRNQGDKEAESQFKEVKEAYEILTDDQKRAAYDQYGHAAFEQGGMGGGGADFSDI-FGDVFGDIFGGG--RRQQRPSRGADLRYSMELTLEEAVRG 127          
The following BLAST results are available for this feature:
BLAST of CX296527 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_LEPIC7.872e-2238.73Chaperone protein dnaJ OS=Leptospira interrogans s... [more]
DNAJ_ANAPZ7.872e-2236.69Chaperone protein dnaJ OS=Anaplasma phagocytophilu... [more]
DNJA4_MOUSE1.028e-2144.78DnaJ homolog subfamily A member 4 OS=Mus musculus ... [more]
DNJA4_HUMAN1.028e-2144.03DnaJ homolog subfamily A member 4 OS=Homo sapiens ... [more]
DNAJ_THIDA1.028e-2139.26Chaperone protein dnaJ OS=Thiobacillus denitrifica... [more]
DNAJ_FRAP21.028e-2141.09Chaperone protein dnaJ OS=Francisella philomiragia... [more]
DNAJ_BORBU1.028e-2140.60Chaperone protein dnaJ OS=Borrelia burgdorferi GN=... [more]
DNAJ_CAMJJ1.343e-2143.70Chaperone protein dnaJ OS=Campylobacter jejuni sub... [more]
DNAJ_CAMHC1.343e-2150.52Chaperone protein dnaJ OS=Campylobacter hominis (s... [more]
DNAJ_PHOLL1.754e-2138.46Chaperone protein dnaJ OS=Photorhabdus luminescens... [more]

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Properties
Property NameValue
Genbank descriptionC05142E07SK FerrChloL1 Citrus clementina cDNA clone C05142E07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296527 ID=CX296527; Name=CX296527; organism=Citrus clementina; type=EST; length=688bp
GAGGCCTCGTCCCGAATTCGGCACGAGGCAGCAACGACTTCTGAATTGAC
AGATAAAAATTAAAAAGAAAAAAATTATTGTAATCTCAGAATTTTGCTAA
GATCTGAAAATTAAACCCTAGATTCTAAGTTTCGGAGAGGCATTAAACTC
TCTCCTCTTGTTGATCTATTAATGGCGCATCGGCGAGCAAGGCTGTTGTT
CCTATTGTGCGCACTTTGTTACGCCCTCAACGTCATTGCGGGGAAGAGCT
ACTATGAAGTATTGCAAGTGCCGAGGGGAGCATCGGACGAGCAGATCAAA
AGAGCGTATAGAAAGCTGGCATTGAAGTATCATCCTGATAAAAACCAGGG
GAATGAAGAAGCTAATAAGCGATTTGCTGAGATTAACAATGCGTATGAGG
TGTTATCGGATAGCGAAACGAGGAATATATATGATACATATGGAGAAGAG
GGACTGAAACAGCATGCTGCTGGTGGAGGCAGAGGTGGAGGGATGGGAGT
TAACATTCAAGACATTTTCAGCTCTTTCTTTGGTGGAGGTCCAATGGAAG
AGGATGAGAAAATTGTGAAGGGTGATGATGTTATTGTTGAACTGGATGCA
ACATTGGAAGATTTATACATGGGAGGTTCCCTAAAGGTATGGAGAGAGAA
AATGTTATAAGCCAGCCCCAGGCAAAGGCGCTGTAACT
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