CX296568

Overview
NameCX296568
Unique NameCX296568
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length542
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296568 vs. ExPASy Swiss-Prot
Match: ACCO_PERAE (1-aminocyclopropane-1-carboxylate oxidase OS=Persea americana GN=ACO PE=2 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 2.139e-54
Identity = 108/137 (78.83%), Postives = 120/137 (87.59%), Query Frame = 2
Query:    5 LALQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDGEGRMSLASFYNPGSDAVIYPAPALLEKEA-EKKQVYPKFVFEDYMKLYVPLKFQAKEPRFEA--MKAVETNVNLGPIAT 406
            L  QDD+V+GLQLLKDG+W+DVPP+ HSIV+NLGDQ+EVITNGKYKSV HRV++QTDG  RMSLASFYNPGSDAVI+PAPAL+EKEA EKK+VYPKFVFEDYM LY  LKFQAKEPRFE   MKAVET  NL PI T
Sbjct:  186 LLFQDDRVAGLQLLKDGEWVDVPPMNHSIVINLGDQVEVITNGKYKSVMHRVVAQTDG-NRMSLASFYNPGSDAVIFPAPALVEKEAEEKKEVYPKFVFEDYMNLYAGLKFQAKEPRFEVMKMKAVET-ANLSPITT 320          
BLAST of CX296568 vs. ExPASy Swiss-Prot
Match: ACCO2_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Solanum lycopersicum GN=ACO2 PE=2 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 4.765e-54
Identity = 108/137 (78.83%), Postives = 122/137 (89.05%), Query Frame = 2
Query:    5 LALQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDGEGRMSLASFYNPGSDAVIYPAPALLEKEAEK--KQVYPKFVFEDYMKLYVPLKFQAKEPRFEAMKAVETNVNLGPIATA 409
            L  QDDKVSGLQLLKDG+WIDVPP+RHSIVVNLGDQ+EVITNGKYKSV HRVI+Q DG  RMSLASFYNPG+DA+IYPAPAL++KEAE+  KQVYPKF+F+DYMKLY  LKFQAKEPRFEAMKA+E++    PIA A
Sbjct:  185 LLFQDDKVSGLQLLKDGRWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQKDGT-RMSLASFYNPGNDALIYPAPALVDKEAEEHNKQVYPKFMFDDYMKLYANLKFQAKEPRFEAMKAMESD----PIAIA 316          
BLAST of CX296568 vs. ExPASy Swiss-Prot
Match: ACCO1_DORSP (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Doritaenopsis sp. GN=ACO1 PE=2 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 4.765e-54
Identity = 104/140 (74.29%), Postives = 122/140 (87.14%), Query Frame = 2
Query:    5 LALQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDGEGRMSLASFYNPGSDAVIYPAPALLEKEAE-----KKQVYPKFVFEDYMKLYVPLKFQAKEPRFEAMKAVETNVNLGPIATA 409
            L  QDDKVSGLQLLKDG+WIDVPP+RHSIVVN+GDQ+EVITNGKYKSV HRV++QTDG  RMS+ASFYNPGSDAVI+PAPAL+EKEAE     KK++YPKFVF+DYM LY+  KF+AKEPRFEAMK++E  ++  PI TA
Sbjct:  189 LLFQDDKVSGLQLLKDGEWIDVPPVRHSIVVNIGDQLEVITNGKYKSVLHRVVAQTDG-NRMSIASFYNPGSDAVIFPAPALVEKEAEEKEEKKKEIYPKFVFQDYMNLYIRKKFEAKEPRFEAMKSMEIVMSSQPIPTA 327          
BLAST of CX296568 vs. ExPASy Swiss-Prot
Match: ACCO1_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Solanum lycopersicum GN=ACO1 PE=2 SV=2)

HSP 1 Score: 209.92 bits (533), Expect = 6.224e-54
Identity = 110/136 (80.88%), Postives = 120/136 (88.24%), Query Frame = 2
Query:    5 LALQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDGEGRMSLASFYNPGSDAVIYPAPALLEKEAEKK-QVYPKFVFEDYMKLYVPLKFQAKEPRFEAMKAVETNVNLGPIATA 409
            L  QDDKVSGLQLLKD QWIDVPP+RHSIVVNLGDQ+EVITNGKYKSV HRVI+QTDG  RMSLASFYNPGSDAVIYPA  L+EKEAE+  QVYPKFVF+DYMKLY  LKFQAKEPRFEAMKA+E++    PIA+A
Sbjct:  185 LLFQDDKVSGLQLLKDEQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVLHRVIAQTDGT-RMSLASFYNPGSDAVIYPAKTLVEKEAEESTQVYPKFVFDDYMKLYAGLKFQAKEPRFEAMKAMESD----PIASA 315          
BLAST of CX296568 vs. ExPASy Swiss-Prot
Match: ACCO4_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 4 OS=Solanum lycopersicum GN=ACO4 PE=2 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 1.062e-53
Identity = 106/129 (82.17%), Postives = 114/129 (88.37%), Query Frame = 2
Query:    5 LALQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDGEGRMSLASFYNPGSDAVIYPAPALLEKEAEKKQVYPKFVFEDYMKLYVPLKFQAKEPRFEAMKAVETNVNL 391
            L  QDDKVSGLQLLKD QWIDVPP+RHSIVVNLGDQ+EVITNGKYKSV HRVI+QTDG  RMSLASFYNPG+DAVIYPAP+L+E   E KQVYPKFVF+DYMKLY  LKFQ KEPRFEAMKA+E NV L
Sbjct:  185 LLFQDDKVSGLQLLKDEQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQTDGT-RMSLASFYNPGNDAVIYPAPSLIE---ESKQVYPKFVFDDYMKLYAGLKFQPKEPRFEAMKAMEANVEL 309          
BLAST of CX296568 vs. ExPASy Swiss-Prot
Match: ACCO_TOBAC (1-aminocyclopropane-1-carboxylate oxidase OS=Nicotiana tabacum GN=ACO PE=2 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 2.365e-53
Identity = 110/137 (80.29%), Postives = 121/137 (88.32%), Query Frame = 2
Query:    5 LALQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDGEGRMSLASFYNPGSDAVIYPAPALLEKEAEK-KQVYPKFVFEDYMKLYVPLKFQAKEPRFEAM-KAVETNVNLGPIATA 409
            L  QDDKV+GLQLLKDGQWIDVPP+R SIVVNLGDQ+EVITNGKYKSV HRVI+QTDG  RMSLASFYNPGSDAVI+PAP L+EKEAE+ K +YPKFVF+DYMKLY  LKFQAKEPRFEAM KA+ET V   P+ATA
Sbjct:  185 LLFQDDKVTGLQLLKDGQWIDVPPMRLSIVVNLGDQLEVITNGKYKSVMHRVITQTDGT-RMSLASFYNPGSDAVIFPAPTLVEKEAEESKAIYPKFVFDDYMKLYAGLKFQAKEPRFEAMIKAMET-VKSDPVATA 319          
BLAST of CX296568 vs. ExPASy Swiss-Prot
Match: ACCO2_DORSP (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Doritaenopsis sp. GN=ACO2 PE=2 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 1.533e-52
Identity = 102/138 (73.91%), Postives = 121/138 (87.68%), Query Frame = 2
Query:    5 LALQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDGEGRMSLASFYNPGSDAVIYPAPALLEKEA---EKKQVYPKFVFEDYMKLYVPLKFQAKEPRFEAMKAVETNVNLGPIATA 409
            L  QDDKVSGLQLLKD +WI+VPPLR+SIVVN+GDQ+EVITNGKYKSV HRV++QTDG  RMS+ASFYNPGSDAVI+PAPAL+EKEA   EKK++YPKFVF+DYM LY+  KF+AKEPRFEAMK++E  ++  PI TA
Sbjct:  189 LLFQDDKVSGLQLLKDREWIEVPPLRYSIVVNIGDQLEVITNGKYKSVLHRVVAQTDG-NRMSIASFYNPGSDAVIFPAPALVEKEAEEEEKKEIYPKFVFQDYMNLYIRKKFEAKEPRFEAMKSMEIVMSSQPIPTA 325          
BLAST of CX296568 vs. ExPASy Swiss-Prot
Match: ACCO_DENCR (1-aminocyclopropane-1-carboxylate oxidase OS=Dendrobium crumenatum GN=ACO PE=2 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 5.825e-52
Identity = 101/137 (73.72%), Postives = 118/137 (86.13%), Query Frame = 2
Query:    5 LALQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDGEGRMSLASFYNPGSDAVIYPAPALLEKEA--EKKQVYPKFVFEDYMKLYVPLKFQAKEPRFEAMKAVETNVNLGPIATA 409
            L  QDD VSGLQLLKD +WIDVPP+RHSIVVN+GDQ+EVITNGKYKSV HRV++QT+G  RMS+ASFYNPGSDAVI+PAP L+EKEA  +KK+ YPKFVFEDYMKLYV  KF+AKEPRFEAMK ++  ++  PI TA
Sbjct:  183 LLFQDDTVSGLQLLKDEEWIDVPPMRHSIVVNIGDQLEVITNGKYKSVMHRVVAQTNG-NRMSIASFYNPGSDAVIFPAPELVEKEAAEKKKETYPKFVFEDYMKLYVRQKFEAKEPRFEAMKTMDAVISSQPIPTA 318          
BLAST of CX296568 vs. ExPASy Swiss-Prot
Match: ACCO1_MALDO (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Malus domestica PE=1 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 4.931e-51
Identity = 100/135 (74.07%), Postives = 114/135 (84.44%), Query Frame = 2
Query:    5 LALQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDGEGRMSLASFYNPGSDAVIYPAPALLEKEAEKKQVYPKFVFEDYMKLYVPLKFQAKEPRFEAMKAVETNVNLGPIATA 409
            L  QDDKVSGLQLLKDG+W+DVPP+ HSIV+NLGDQIEVITNGKYKSV HRVI+Q+DG  RMS+ASFYNPG+D+ I PAPA+LEK+ E    YPKFVF+DYMKLY  LKFQAKEPRFEAMKA E+     P+ATA
Sbjct:  185 LLFQDDKVSGLQLLKDGEWVDVPPMHHSIVINLGDQIEVITNGKYKSVMHRVIAQSDGT-RMSIASFYNPGNDSFISPAPAVLEKKTEDAPTYPKFVFDDYMKLYSGLKFQAKEPRFEAMKAKEST----PVATA 314          
BLAST of CX296568 vs. ExPASy Swiss-Prot
Match: ACCO_PEA (1-aminocyclopropane-1-carboxylate oxidase OS=Pisum sativum GN=ACO PE=2 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 8.412e-51
Identity = 100/134 (74.63%), Postives = 113/134 (84.33%), Query Frame = 2
Query:    5 LALQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDGEGRMSLASFYNPGSDAVIYPAPALLEKEAEKKQVYPKFVFEDYMKLYVPLKFQAKEPRFEAMKAVETNVNLGPIAT 406
            L  QDDKVSGLQLLKD QWIDVPP+RHSIV+NLGDQ+EVITNGKYKSV HRVI+QTDG  RMS+ASFYNPG DAVI PA  LL KE E  +VYPKFVF+DYMKLY+ LKFQAKEPRFEAM    ++V +GP+ +
Sbjct:  185 LLFQDDKVSGLQLLKDDQWIDVPPMRHSIVINLGDQLEVITNGKYKSVMHRVIAQTDG-ARMSIASFYNPGDDAVISPASTLL-KENETSEVYPKFVFDDYMKLYMGLKFQAKEPRFEAMMKAMSSVKVGPVVS 316          
The following BLAST results are available for this feature:
BLAST of CX296568 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
ACCO_PERAE2.139e-5478.831-aminocyclopropane-1-carboxylate oxidase OS=Perse... [more]
ACCO2_SOLLC4.765e-5478.831-aminocyclopropane-1-carboxylate oxidase 2 OS=Sol... [more]
ACCO1_DORSP4.765e-5474.291-aminocyclopropane-1-carboxylate oxidase 1 OS=Dor... [more]
ACCO1_SOLLC6.224e-5480.881-aminocyclopropane-1-carboxylate oxidase 1 OS=Sol... [more]
ACCO4_SOLLC1.062e-5382.171-aminocyclopropane-1-carboxylate oxidase 4 OS=Sol... [more]
ACCO_TOBAC2.365e-5380.291-aminocyclopropane-1-carboxylate oxidase OS=Nicot... [more]
ACCO2_DORSP1.533e-5273.911-aminocyclopropane-1-carboxylate oxidase 2 OS=Dor... [more]
ACCO_DENCR5.825e-5273.721-aminocyclopropane-1-carboxylate oxidase OS=Dendr... [more]
ACCO1_MALDO4.931e-5174.071-aminocyclopropane-1-carboxylate oxidase 1 OS=Mal... [more]
ACCO_PEA8.412e-5174.631-aminocyclopropane-1-carboxylate oxidase OS=Pisum... [more]

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Properties
Property NameValue
Genbank descriptionC05146B12SK FerrChloL1 Citrus clementina cDNA clone C05146B12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296568 ID=CX296568; Name=CX296568; organism=Citrus clementina; type=EST; length=542bp
GAGGCTTGCTCTTCAGGATGACAAAGTCAGTGGCCTTCAGCTTCTTAAAG
ATGGCCAGTGGATTGATGTGCCCCCATTGCGCCACTCCATTGTTGTCAAC
CTCGGTGACCAAATTGAGGTGATCACCAATGGAAAGTACAAGAGTGTGGA
GCACAGAGTGATTTCTCAAACCGACGGCGAGGGCCGGATGTCCCTAGCTT
CATTCTACAATCCTGGAAGTGATGCTGTGATCTATCCAGCACCAGCATTG
CTTGAAAAAGAAGCTGAGAAGAAACAAGTGTACCCAAAATTTGTTTTTGA
GGACTACATGAAGCTCTATGTTCCCCTCAAGTTCCAGGCCAAGGAACCAA
GATTTGAAGCCATGAAAGCTGTGGAAACTAATGTTAACTTGGGTCCAATT
GCCACCGCTTAAACTATTATTTTATAGCCAAATTATTTTTATCTGCTGGA
GTGGTGTGACATCCATTTATATTATTTGTAGACAGTAACAAATGTAACTA
CTCTGTGATAGTAGTCTCTTCCAAATAAAGGGGGGGCCCGGT
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