CX296568

Overview
NameCX296568
Unique NameCX296568
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length542
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296568 vs. ExPASy Swiss-Prot
Match: FL3H_MALDO (Naringenin,2-oxoglutarate 3-dioxygenase OS=Malus domestica PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 4.989e-11
Identity = 34/89 (38.20%), Postives = 56/89 (62.92%), Query Frame = 2
Query:   11 LQDDKVSGLQLLKDG--QWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDGEGRMSLASFYNPGSDAVIYPAPALLEKEAEK 271
            L  D+V GLQ  +D    WI V P+  + VVNLGD   +++NG++K+ +H+ +  ++   R+S+A+F NP  +A++YP   L  +E EK
Sbjct:  227 LLQDQVGGLQATRDDGKTWITVQPVEGAFVVNLGDHGHLLSNGRFKNADHQAVVNSN-SSRLSIATFQNPAQEAIVYP---LSVREGEK 311          
BLAST of CX296568 vs. ExPASy Swiss-Prot
Match: G2OX3_ARATH (Gibberellin 2-beta-dioxygenase 3 OS=Arabidopsis thaliana GN=GA2OX3 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 6.516e-11
Identity = 37/100 (37.00%), Postives = 59/100 (59.00%), Query Frame = 2
Query:   11 LQDDKVSGLQL-LKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDGEGRMSLASFYNPGSDAVIYPAPALLEKEAEKKQVYPKFVFEDY 307
            L+ +   GLQ+ +KDG W+DV P   S  V +GD ++V+TNG++KSV+HRV++ T    R+S+  F  P     I P   L+ K+ +   +Y +F +  Y
Sbjct:  211 LRSNDTEGLQICVKDGTWVDVTPDHSSFFVLVGDTLQVMTNGRFKSVKHRVVTNTK-RSRISMIYFAGPPLSEKIAPLSCLVPKQDD--CLYNEFTWSQY 307          
BLAST of CX296568 vs. ExPASy Swiss-Prot
Match: FNSI_PETCR (Flavone synthase OS=Petroselinum crispum GN=FNSI PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 6.516e-11
Identity = 41/128 (32.03%), Postives = 72/128 (56.25%), Query Frame = 2
Query:   11 LQDDKVSGLQLLKDG--QWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDGEGRMSLASFYNPGSDAVIYP------APALLEKEAEKKQVYPKFVFEDYMKLYVPLKFQAKEPRFEAMKA 370
            L  D V GLQ  +DG   WI V P+  + VVNLGD    ++NG++++ +H+ +  +    R+S+A+F NP  +A++YP        A+L++     ++Y K + + ++++    K  AKE R +  KA
Sbjct:  227 LLQDMVGGLQATRDGGKTWITVQPVEGAFVVNLGDHGHYLSNGRFRNADHQAVVNST-SSRLSIATFQNPAQNAIVYPLKIREGEKAILDEAITYAEMYKKCMTK-HIEVATRKKL-AKEKRLQDEKA 351          
BLAST of CX296568 vs. ExPASy Swiss-Prot
Match: FLS_SOLTU (Flavonol synthase/flavanone 3-hydroxylase OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 6.516e-11
Identity = 36/94 (38.30%), Postives = 55/94 (58.51%), Query Frame = 2
Query:   35 LQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDGEGRMSLASFYNPGSDAVIYPAPALLEKEAEKKQVYPKFVFEDYMKL 316
            +Q+ KDG W DV  + ++I+V++GDQ+E+++NGKYKSV HR  +    + RMS   F  P S+  + P P L+ +    K    K+    Y KL
Sbjct:  252 VQVFKDGHWYDVNYIPNAIIVHIGDQVEILSNGKYKSVYHRT-TVNKYKTRMSWPVFLEPSSEHEVGPIPNLINEANPPKFKTKKYKDYVYCKL 344          
BLAST of CX296568 vs. ExPASy Swiss-Prot
Match: FLS_PETCR (Flavonol synthase/flavanone 3-hydroxylase OS=Petroselinum crispum GN=FLS PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 6.516e-11
Identity = 38/102 (37.25%), Postives = 57/102 (55.88%), Query Frame = 2
Query:   11 LQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDGEGRMSLASFYNPGSDAVIYPAPALLEKEAEKKQVYPKFVFEDYMKL 316
            L  ++V GLQ+ KD  W DV  + +++++++GDQIE+++NGKYKSV HR     D + RMS   F  P  + +  P   L+  E   K    K+    Y KL
Sbjct:  232 LVPNEVQGLQVHKDDHWYDVKYIPNALIIHIGDQIEIMSNGKYKSVYHRTTVNKD-KTRMSWPVFLEPPPELLTGPISKLITDENPAKFKTKKYKDYVYCKL 332          
BLAST of CX296568 vs. ExPASy Swiss-Prot
Match: GSL_ARATH (Probable 2-oxoacid dependent dioxygenase OS=Arabidopsis thaliana GN=GSL-OH PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 8.510e-11
Identity = 29/66 (43.94%), Postives = 47/66 (71.21%), Query Frame = 2
Query:   11 LQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDGEGRMSLASFY 208
            L +D   GLQ+L DG WIDVPP   +++ N+GD +++I+N K+ S+EHR+++    E R+S+A F+
Sbjct:  240 LLNDNNGGLQVLYDGYWIDVPPNPEALIFNVGDFLQLISNDKFVSMEHRILANGGEEPRISVACFF 305          
BLAST of CX296568 vs. ExPASy Swiss-Prot
Match: FLS_MATIN (Flavonol synthase/flavanone 3-hydroxylase (Fragment) OS=Matthiola incana PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 8.510e-11
Identity = 34/97 (35.05%), Postives = 58/97 (59.79%), Query Frame = 2
Query:   20 DKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDGEGRMSLASFYNPGSDAVIYPAPALLEKEAEKKQVYPKFVFEDYM 310
            +++ GLQ+ KD  WI+V  +  +I+VN+GDQI +++NGKYK+V H+     + + RMS     +P  D V+ P P L  ++   K  +    ++DY+
Sbjct:  187 NEIPGLQVFKDDHWIEVEYIPSAIIVNIGDQIMMLSNGKYKNVLHKTTVDKE-KTRMSWPVLVSPTYDMVVGPLPELTSEDDPPK--FKPIAYKDYV 280          
BLAST of CX296568 vs. ExPASy Swiss-Prot
Match: FL3H_MATIN (Naringenin,2-oxoglutarate 3-dioxygenase (Fragment) OS=Matthiola incana GN=FHT PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 8.510e-11
Identity = 36/103 (34.95%), Postives = 58/103 (56.31%), Query Frame = 2
Query:   11 LQDDKVSGLQLLKD--GQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDGEGRMSLASFYNPGSDAVIYPAPALLEKEAEKKQVYPKFVFEDYMK 313
            L  D+V GLQ  +D    WI V P+  + VVNLGD    ++NG++K+ +H+ +  ++   R+S+A+F NP  +A +YP   L  +E EK  +     F +  K
Sbjct:  225 LLQDQVGGLQATRDDGNTWITVQPVEGAFVVNLGDHGHFLSNGRFKNADHQAVVNSN-SSRLSIATFQNPAPEATVYP---LKVREGEKAIMEEPITFAEMYK 323          
The following BLAST results are available for this feature:
BLAST of CX296568 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
FL3H_MALDO4.989e-1138.20Naringenin,2-oxoglutarate 3-dioxygenase OS=Malus d... [more]
G2OX3_ARATH6.516e-1137.00Gibberellin 2-beta-dioxygenase 3 OS=Arabidopsis th... [more]
FNSI_PETCR6.516e-1132.03Flavone synthase OS=Petroselinum crispum GN=FNSI P... [more]
FLS_SOLTU6.516e-1138.30Flavonol synthase/flavanone 3-hydroxylase OS=Solan... [more]
FLS_PETCR6.516e-1137.25Flavonol synthase/flavanone 3-hydroxylase OS=Petro... [more]
GSL_ARATH8.510e-1143.94Probable 2-oxoacid dependent dioxygenase OS=Arabid... [more]
FLS_MATIN8.510e-1135.05Flavonol synthase/flavanone 3-hydroxylase (Fragmen... [more]
FL3H_MATIN8.510e-1134.95Naringenin,2-oxoglutarate 3-dioxygenase (Fragment)... [more]

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Properties
Property NameValue
Genbank descriptionC05146B12SK FerrChloL1 Citrus clementina cDNA clone C05146B12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296568 ID=CX296568; Name=CX296568; organism=Citrus clementina; type=EST; length=542bp
GAGGCTTGCTCTTCAGGATGACAAAGTCAGTGGCCTTCAGCTTCTTAAAG
ATGGCCAGTGGATTGATGTGCCCCCATTGCGCCACTCCATTGTTGTCAAC
CTCGGTGACCAAATTGAGGTGATCACCAATGGAAAGTACAAGAGTGTGGA
GCACAGAGTGATTTCTCAAACCGACGGCGAGGGCCGGATGTCCCTAGCTT
CATTCTACAATCCTGGAAGTGATGCTGTGATCTATCCAGCACCAGCATTG
CTTGAAAAAGAAGCTGAGAAGAAACAAGTGTACCCAAAATTTGTTTTTGA
GGACTACATGAAGCTCTATGTTCCCCTCAAGTTCCAGGCCAAGGAACCAA
GATTTGAAGCCATGAAAGCTGTGGAAACTAATGTTAACTTGGGTCCAATT
GCCACCGCTTAAACTATTATTTTATAGCCAAATTATTTTTATCTGCTGGA
GTGGTGTGACATCCATTTATATTATTTGTAGACAGTAACAAATGTAACTA
CTCTGTGATAGTAGTCTCTTCCAAATAAAGGGGGGGCCCGGT
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