CX296576
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296576 vs. ExPASy Swiss-Prot
Match: GI1L3_ARATH (Probable gibberellin receptor GID1L3 OS=Arabidopsis thaliana GN=GID1L3 PE=1 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 2.691e-35 Identity = 96/218 (44.04%), Postives = 126/218 (57.80%), Query Frame = 2 Query: 71 LPWKAWLSISTLSFAMQICFRRNMTVNRFLFNLYDRK--SSPSTKNGVTSFDVSVDATRDLWFRLYSP----TNTTATNL---------PVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHRCPSQYEDGIDALKFIDSSFIDIENFPACADIK-QCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFFGGEERTE 676 +P W+ IS A + R + T NR L DRK ++ + NGV SFDV +D +L R+Y P T+ + T+L PVIV+FHGG FA +ANS +YD CRRL AVV+SVNYRR+PE+R P Y+DG LK+++SS + D K + FLAGDS+GGN+ HNVAV A SR+ + G I + P FGG ERTE Sbjct: 16 VPLNTWVLISNFKLAYNLLRRPDGTFNRHLAEFLDRKVPANANPVNGVFSFDVIIDRQTNLLSRVYRPADAGTSPSITDLQNPVDGEIVPVIVFFHGGSFAHSSANSAIYDTLCRRLVGLCGAVVVSVNYRRAPENRYPCAYDDGWAVLKWVNSS----SWLRSKKDSKVRIFLAGDSSGGNIVHNVAVRAVE---SRIDVLGNILLNPMFGGTERTE 226
BLAST of CX296576 vs. ExPASy Swiss-Prot
Match: GI1L2_ARATH (Probable gibberellin receptor GID1L2 OS=Arabidopsis thaliana GN=GID1L2 PE=1 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 3.079e-31 Identity = 84/220 (38.18%), Postives = 121/220 (55.00%), Query Frame = 2 Query: 71 LPWKAWLSISTLSFAMQICFRRNMTVNRFLFNLYDRKSSPST--KNGVTSFDVSVDATRDLWFRLYSPTN----------------TTATNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHRCPSQYEDGIDALKFIDSSFIDIENFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFFGGEERTE 676 +P W+ IS A ++ R + + NR L DRK ++ +GV SFD VD+T +L R+Y P + +T +PV+++FHGG F +ANS +YD CRRL VV+SV+YRRSPEHR P Y+DG +AL ++ S + + +LAGDS+GGN+AHNVAV A +++ G I + P FGG+ERT+ Sbjct: 16 VPLNTWVLISNFKLAYKVLRRPDGSFNRDLAEFLDRKVPANSFPLDGVFSFD-HVDSTTNLLTRIYQPASLLHQTRHGTLELTKPLSTTEIVPVLIFFHGGSFTHSSANSAIYDTFCRRLVTICGVVVVSVDYRRSPEHRYPCAYDDGWNALNWVKSRVWLQSGKDSNVYV---YLAGDSSGGNIAHNVAVRATN---EGVKVLGNILLHPMFGGQERTQ 228
BLAST of CX296576 vs. ExPASy Swiss-Prot
Match: GI1L1_ARATH (Probable gibberellin receptor GID1L1 OS=Arabidopsis thaliana GN=GID1L1 PE=1 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 8.957e-31 Identity = 89/221 (40.27%), Postives = 119/221 (53.85%), Query Frame = 2 Query: 71 LPWKAWLSISTLSFAMQICFRRNMTVNRFLFNLYDRKSSPSTK--NGVTSFDVSVDATRDLWFRLYSPTNTTATN---------------LPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHRCPSQYEDGIDALKFIDS-SFIDIENFPACADIK-QCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFFGGEERTE 676 +P W+ IS A I R + T NR L DRK + + +GV SFDV +D +L R+Y P +PVI++FHGG FA +ANS +YD CRRL VV+SVNYRR+PE+ P Y+DG AL +++S S++ + D K FLAGDS+GGN+AHNVA+ A S + + G I + P FGG ERTE Sbjct: 16 VPLNTWVLISNFKVAYNILRRPDGTFNRHLAEYLDRKVTANANPVDGVFSFDVLIDRRINLLSRVYRPAYADQEQPPSILDLEKPVDGDIVPVILFFHGGSFAHSSANSAIYDTLCRRLVGLCKCVVVSVNYRRAPENPYPCAYDDGWIALNWVNSRSWLKSKK-----DSKVHIFLAGDSSGGNIAHNVALRA---GESGIDVLGNILLNPMFGGNERTE 228
BLAST of CX296576 vs. ExPASy Swiss-Prot
Match: GID1_ORYSJ (Gibberellin receptor GID1 OS=Oryza sativa subsp. japonica GN=GID1 PE=1 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 7.847e-27 Identity = 81/226 (35.84%), Postives = 111/226 (49.12%), Query Frame = 2 Query: 71 LPWKAWLSISTLSFAMQICFRRNMTVNRFLFNLYDRKSSPSTK--NGVTSFDVSVDATRDLWFRLYSPTNT----------------------TATNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHRCPSQYEDGIDALKFIDSSFIDIENFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFFGGEERTE 676 +P W+ IS + I R + T R L DR+ + + GV+SFD +D + L R+Y A PVI++FHGG F +A+S +YD CRR VV+SVNYRR+PEHR P Y+DG ALK++ S A A + FL+GDS+GGN+AH+VAV A +++ G I + FGG ERTE Sbjct: 16 VPLHTWVLISNFKLSYNILRRADGTFERDLGEYLDRRVPANARPLEGVSSFDHIIDQSVGLEVRIYRAAAEGDAEEGAAAVTRPILEFLTDAPAAEPFPVIIFFHGGSFVHSSASSTIYDSLCRRFVKLSKGVVVSVNYRRAPEHRYPCAYDDGWTALKWVMSQPFMRSGGDAQARV---FLSGDSSGGNIAHHVAVRAAD---EGVKVCGNILLNAMFGGTERTE 235
BLAST of CX296576 vs. ExPASy Swiss-Prot
Match: ADCL2_HUMAN (Arylacetamide deacetylase-like 2 OS=Homo sapiens GN=AADACL2 PE=2 SV=3) HSP 1 Score: 79.337 bits (194), Expect = 2.005e-14 Identity = 42/111 (37.84%), Postives = 64/111 (57.66%), Query Frame = 2 Query: 242 DLWFRLYSPTNTTATNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHRCPSQYEDGIDALKFIDSSFIDIENFPACADIKQCFLAGDSAGGNLA 574 D+ RLY P + T ++YFHGGGF ++ + +D R A + AVV+ V+YR +P+H P+Q+EDG+ A+KF ++ D + +AGDS+GGNLA Sbjct: 88 DIPVRLYLPKRKSETRRRAVIYFHGGGFCFGSSKQRAFDFLNRWTANTLDAVVVGVDYRLAPQHHFPAQFEDGLAAVKFF---LLEKILTKYGVDPTRICIAGDSSGGNLA 195
BLAST of CX296576 vs. ExPASy Swiss-Prot
Match: AAAD_RABIT (Arylacetamide deacetylase OS=Oryctolagus cuniculus GN=AADAC PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.100e-12 Identity = 51/150 (34.00%), Postives = 79/150 (52.67%), Query Frame = 2 Query: 137 NMTVNRFLFNLYDRKSSPSTKNGVTSFDVSVDATRDLWFRLYSPTNTTATNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHRCPSQYEDGIDALKFIDSSFIDIENFPACADIKQCFLAGDSAGGNLAHNVA 586 N+ +N F ++ P++ VT V+ ++ R+Y P + T + Y HGGG+ + +A YD RR A + VV+S NYR +PE+ P Q+ED DALK+ + +E + D ++ ++GDSAGGNLA VA Sbjct: 55 NIFMNTVKFLTSFQEVPPTSDENVT---VTETTFNNVPVRVYVPKRKSKTLRRGLFYIHGGGWCVGSAALSGYDLLSRRTADRLDVVVVSTNYRLAPEYHFPIQFEDVYDALKWFLRQDV-LEKYG--VDPERVGVSGDSAGGNLAAAVA 198
BLAST of CX296576 vs. ExPASy Swiss-Prot
Match: AAAD_BOVIN (Arylacetamide deacetylase OS=Bos taurus GN=AADAC PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.201e-12 Identity = 65/203 (32.02%), Postives = 102/203 (50.25%), Query Frame = 2 Query: 74 PWKAWLSISTLSFAMQIC-FRRNMTVNRFLFN--LYDRKSS--PSTKNGVTSFDVSVDATRDLWFRLYSPTNTTATNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHRCPSQYEDGIDALKFIDSSFIDIENFPAC-ADIKQCFLAGDSAGGNLAHNVA--VLADGCNFSRLRLNGLI--AIQPF 652 PWK L + L + + F + +N F+ + L+ R P++ + D + + D+ R+Y P T + + Y HGGG+ + + YD R A + AVVIS NYR +P++ P Q+ED ALK+ F+D +N + D + ++GDSAGGNLA VA +L D +L++ LI A+Q F Sbjct: 30 PWKIMLLNTFLKTSSYLALFGEILGLNHFMKSMALFSRIQGFPPTSDENIIVKDTTFN---DIPVRIYVPQQKTKSLRRGLFYIHGGGWCFGSNDYYSYDLLSRWTAERLDAVVISTNYRLAPKYHFPVQFEDVYTALKW----FLDPQNLESYGVDPGRIGISGDSAGGNLAAAVAQQLLEDPDVKIKLKVQTLIYPALQNF 225
BLAST of CX296576 vs. ExPASy Swiss-Prot
Match: NCEH1_BOVIN (Neutral cholesterol ester hydrolase 1 OS=Bos taurus GN=NCEH1 PE=2 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 2.709e-11 Identity = 53/175 (30.29%), Postives = 79/175 (45.14%), Query Frame = 2 Query: 74 PWKAWLSISTLSFAMQIC-------FRRNMTVNRFLFNLYDRKSSPSTKNGVTSFDVSVDATRDLWFRLYSPTNTTATNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHRCPSQYEDGIDALKFIDSSFIDIENF-PACADIKQCFLAGDSAGGNLA 574 PWK L +T A Q+ ++ F+ + +KS+ S+ V D D F P IVY HGGG+A+ +A + YD+ C +A E+ AV++S+ YR P+ P Q D + A K+ F+ E D + ++GDSAGGNLA Sbjct: 30 PWKLMLLDATFRSAQQVSNLIHFLGLSHHLLALNFIIVSFGKKSAWSSAQ-VKVTDTDFDGVEVRVFE--GPPKPEEPLKRSIVYIHGGGWALASAKIRYYDELCTTMAEELNAVIVSIEYRLVPKVYFPEQIHDVVHATKY----FLQPEVLHKYSVDPGRVGISGDSAGGNLA 197
BLAST of CX296576 vs. ExPASy Swiss-Prot
Match: NCEH1_RAT (Neutral cholesterol ester hydrolase 1 OS=Rattus norvegicus GN=Nceh1 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.539e-11 Identity = 53/175 (30.29%), Postives = 77/175 (44.00%), Query Frame = 2 Query: 74 PWKAWLSISTLSFAMQIC-------FRRNMTVNRFLFNLYDRKSSPSTKNGVTSFDVSVDATRDLWFRLYSPTNTTATNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHRCPSQYEDGIDALK-FIDSSFIDIENFPACADIKQCFLAGDSAGGNLA 574 PWK L +T A Q+ ++ F+ + +KS+ S+ V D D F P +VY HGGG+A+ +A YD C +A E+ AV++S+ YR P+ P Q D I A K F+ +D D + ++GDSAGGNLA Sbjct: 30 PWKLMLLDATFRGAQQVSNLIHSLGLSHHLITLNFIIISFGKKSARSSPR-VKVTDTDFDGVEVRVFE--GPPKPDEPLRRSVVYIHGGGWALASAKISYYDQLCTAMAEELNAVIVSIEYRLVPQVYFPEQIHDVIRATKYFLQPEVLDKYK----VDPGRVGVSGDSAGGNLA 197
BLAST of CX296576 vs. ExPASy Swiss-Prot
Match: NCEH1_HUMAN (Neutral cholesterol ester hydrolase 1 OS=Homo sapiens GN=NCEH1 PE=1 SV=3) HSP 1 Score: 68.5514 bits (166), Expect = 3.539e-11 Identity = 55/197 (27.92%), Postives = 89/197 (45.18%), Query Frame = 2 Query: 74 PWKAWLSISTLSFAMQIC-------FRRNMTVNRFLFNLYDRKSSPSTKNGVTSFDVSVDATRDLWFRLYSPTNTTATNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHRCPSQYEDGIDALKFIDSSFIDIENFPACADIKQCFLAGDSAGGNLAHNVA--VLADGCNFSRLRLNGLI 637 PWK L +T A Q+ ++ F+ + +KS+ S+ V D D F P +VY HGGG+A+ +A + YD+ C +A E+ AV++S+ YR P+ P Q D + A K+ + ++ + D + ++GDSAGGNLA + D ++L+L LI Sbjct: 30 PWKLMLLDATFRGAQQVSNLIHYLGLSHHLLALNFIIVSFGKKSAWSSAQ-VKVTDTDFDGVEVRVFE--GPPKPEEPLKRSVVYIHGGGWALASAKIRYYDELCTAMAEELNAVIVSIEYRLVPKVYFPEQIHDVVRATKYFLKPEV-LQKY--MVDPGRICISGDSAGGNLAAALGQQFTQDASLKNKLKLQALI 220 The following BLAST results are available for this feature:
BLAST of CX296576 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296576 ID=CX296576; Name=CX296576; organism=Citrus clementina; type=EST; length=676bpback to top |