CX296726
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ROCA_BACWK (1-pyrroline-5-carboxylate dehydrogenase OS=Bacillus weihenstephanensis (strain KBAB4) GN=rocA PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 5.020e-30 Identity = 81/250 (32.40%), Postives = 134/250 (53.60%), Query Frame = 1 Query: 10 KYCLTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAGMI-PLQM-------ELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPPE-ESCDITPVVSESSANFIEGLVMDAKQKGATFC--QEYRREGNLIWPLLLDNVRPDMRI 723 +Y S IPLGV + I P+N+P + A+++GN+++LKP + V A + AG P G+++ V G GSE+GD+L HP +SFTG D GI I ++A + P Q+ E+GGKD +V ++ADL+L A +I+ F +SGQ+C+A ++ E V D + LTVG P+ + ++ PV +++ + + V K++G + +G I P ++ +V D R+ Sbjct: 163 EYNRFSYIPLGVGVIISPWNFPFAIMAGMTTAAVVSGNTVLLKPASTTPVVAAKFMEVLEEAGLPAGVVNFVPGNGSEVGDYLVDHPRTRFVSFTGSRDVGIRIYERAAKVNPGQIWLKRVIAEMGGKDTIVVDKEADLELAAKSIVASAFGFSGQKCSACSRAVIHEDVYDHVLNRAVELTKELTVGNPDAKDINMGPVNDQAAFDKVMSYVAIGKEEGKIVSGGEGDDSKGWFIQPTIVADVAEDARL 412
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ROCA_BACSU (1-pyrroline-5-carboxylate dehydrogenase OS=Bacillus subtilis GN=rocA PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 6.556e-30 Identity = 79/241 (32.78%), Postives = 123/241 (51.04%), Query Frame = 1 Query: 37 LGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAGMIP--------LQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPPEE-SCDITPVVSESSANFIEGLVMDAKQKGATFC--QEYRREGNLIWPLLLDNVRPDMRI 723 LGV + I PFN+P+ + A++ GN+++LKP V A V AG P G+++ + G G+EIGDFL HP +SFTG G I ++A + + E+GGKD +V +DADLDL A++I+ F YSGQ+C+A ++ + V D + LTVG PE+ + PV+ E+S N + + K +G + +G I P + +V + R+ Sbjct: 172 LGVGIVISPFNFPLAIMAGTAVAAIVTGNTILLKPADAAPVVAAKFVEVMEEAGLPNGVLNYIPGDGAEIGDFLVEHPKTRFVSFTGSRAVGCRIYERAAKVQPGQKWLKRVIAEMGGKDTVLVDKDADLDLAASSIVYSAFGYSGQKCSAGSRAVIHQDVYDEVVEKAVALTKTLTVGNPEDPDTYMGPVIHEASYNKVMKYIEIGKSEGKLLAGGEGDDSKGYFIQPTIFADVDENARL 412
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: BETB_BURCM (Betaine aldehyde dehydrogenase OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=betB PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 8.562e-30 Identity = 89/249 (35.74%), Postives = 122/249 (49.00%), Query Frame = 1 Query: 13 YCLTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAGMIPLQ---MELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPPEESC-DITPVVSESSANFIEGLVMDAKQKGATFCQEYRR-------EGNLIWPLLLDNVRPDMRI 723 + T PLGV I +NYP+ +A K APAL AGN++V KP + AL + + AG P G+ + V G GS +G LT HP + +SFTGG +TG + AG L+ MELGGK IV EDADLD A + F SGQ CT V V SV D+ + VG P ++ + P+VS + + + G + K +GA R G + P + + R DM+I Sbjct: 135 FVYTRREPLGVCAGIGAWNYPIQIACWKTAPALAAGNAMVFKPSEVTPLTALKLAEIYTEAGVPAGVFNVVQGDGS-VGALLTGHPDIAKVSFTGGVETGKKVMSLAGASSLKEVTMELGGKSPLIVFEDADLDRAADIAVTANFFSSGQVCTNGTRVFVHRSVKDAFTQRVLERVKRIRVGKPTDAATNFGPLVSAAQLDKVLGFIDSGKAEGAKLLAGGTRLTDGHFASGQYVAPTVFGDCRDDMKI 382
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: BETB_BURVG (Betaine aldehyde dehydrogenase OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=betB PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.118e-29 Identity = 87/249 (34.94%), Postives = 123/249 (49.40%), Query Frame = 1 Query: 13 YCLTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAGMIPLQ---MELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPPEES-CDITPVVSESSANFIEGLVMDAKQKGATFCQEYRR-------EGNLIWPLLLDNVRPDMRI 723 + T PLGV I +NYP+ +A K APAL AGN++V KP + AL + + AG P G+ + V G GS +G LT HP + +SFTGG +TG + AG L+ MELGGK IV +DADLD A + F SGQ CT V V S+ D+ + VG P ++ + P+VS + + + G + K +GA R +G + P + + R DM+I Sbjct: 135 FVYTRREPLGVCAGIGAWNYPIQIACWKTAPALAAGNAMVFKPSEVTPLTALKLAEIYTEAGVPAGVFNVVQGDGS-VGALLTGHPDIAKVSFTGGVETGKKVMSLAGASSLKEVTMELGGKSPLIVFDDADLDRAADIAVIANFFSSGQVCTNGTRVFVQRSIKDAFTAKVLERVKRIRVGKPTDADTNFGPLVSAAQLDKVLGFIASGKAEGAKLLAGGTRLTDGHFADGQYVAPTVFGDCRDDMKI 382
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: BETB_BURA4 (Betaine aldehyde dehydrogenase OS=Burkholderia ambifaria (strain MC40-6) GN=betB PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.118e-29 Identity = 89/249 (35.74%), Postives = 122/249 (49.00%), Query Frame = 1 Query: 13 YCLTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAGMIPLQ---MELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPPEES-CDITPVVSESSANFIEGLVMDAKQKGATFCQEYRR-------EGNLIWPLLLDNVRPDMRI 723 + T PLGV I +NYP+ +A K APAL AGN++V KP + AL + + AG P G+ + V G GS +G LT HP + +SFTGG +TG + AG L+ MELGGK IV EDADLD A + F SGQ CT V V SV D+ + VG P ++ + P+VS + + + G + K +GA R G + P + + R DM+I Sbjct: 135 FVYTRREPLGVCAGIGAWNYPIQIACWKTAPALAAGNAMVFKPSEVTPLTALKLAEIYTEAGVPAGVFNVVQGDGS-VGALLTGHPDIAKVSFTGGVETGKKVMSLAGASSLKEVTMELGGKSPLIVFEDADLDRAADIAVTANFFSSGQVCTNGTRVFVHRSVKDAFTQRVLERVKRIRVGKPTDADTNFGPLVSAAQLDKVLGFIDSGKAEGAKLLAGGTRLTDGHFGSGQYVAPTVFGDCRDDMKI 382
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ROCA1_BACHD (1-pyrroline-5-carboxylate dehydrogenase 1 OS=Bacillus halodurans GN=rocA1 PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.907e-29 Identity = 81/250 (32.40%), Postives = 132/250 (52.80%), Query Frame = 1 Query: 1 ERTKYCLTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAGMI-PLQ-------MELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPPEESCD-ITPVVSESSANFIEGLVMDAKQKG--ATFCQEYRREGNLIWPLLLDNVRPD 714 E+ +Y T P+GV + I P+N+ + + V ++ GN++VLKP + V A V AG PKG+I+ V G G+E+GD+L HP + I+FTG D G+ + ++A ++ P Q +E+GGKD +V DADLDL A +I+ F +SGQ+C+A ++ + V D + LTVG P + + PV+ E + I + K++G T + G I P ++ ++ P+ Sbjct: 163 EQNRYFYT---PMGVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERAAVVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEGRLMTGGEGDSSTGFFIQPTIIADLDPE 409
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: BETB_PECCP (Betaine aldehyde dehydrogenase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=betB PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.907e-29 Identity = 83/251 (33.07%), Postives = 124/251 (49.40%), Query Frame = 1 Query: 7 TKYCLTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAGMIPLQ---MELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVG-PPEESCDITPVVSESSANFIEGLVMDAKQKGA-------TFCQEYRREGNLIWPLLLDNVRPDMRI 723 T + T PLGVV I +NYP+ +A+ K APAL AGN+++ KP ++ AL + + AG P G+ + +TG G +G LT HP + +SFTGG +G ++ A L+ MELGGK IV EDADLD A + F SGQ CT V V +++ + +G P +E+ + P+VS + + K++GA E +G + P + + R DM+I Sbjct: 133 TSFAYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTSLTALKLAEVYTEAGLPAGVFNVLTGTGQSVGQALTTHPGIAKVSFTGGIASGKTVMANAAGSTLKDVTMELGGKSPLIVFEDADLDKAADIAMMANFFSSGQVCTNGTRVFVPQALQTQFEEKILARVQRIRIGNPTDEAVNFGPLVSFPHRESVLRYIESGKREGARVLVGGEPMTDEKYAQGAFVAPTVFTDCRDDMKI 383
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: BETB_BURP1 (Betaine aldehyde dehydrogenase OS=Burkholderia pseudomallei (strain 1710b) GN=betB PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.907e-29 Identity = 84/249 (33.73%), Postives = 124/249 (49.80%), Query Frame = 1 Query: 13 YCLTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAGMIPLQ---MELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPPEES-CDITPVVSESSANFIEGLVMDAKQK-------GATFCQEYRREGNLIWPLLLDNVRPDMRI 723 + T PLGV I +NYP+ +A K APAL AGN+++ KP ++AL + + AG P G+ + V G GS +G L+ HP + +SFTGG +TG + AG L+ MELGGK IV +DADLD A + F +GQ CT V V ++V D+ + VG P +S + P+ S + + + G + K + GA ++ G + P + + R DMRI Sbjct: 135 FVYTRREPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKPSEVTPLSALKLAEIYTEAGVPAGVFNVVQGDGS-VGALLSAHPGIAKVSFTGGVETGKKVMSLAGASSLKEVTMELGGKSPLIVFDDADLDRAADIAVTANFFSAGQVCTNGTRVFVQQAVKDAFVERVLARVARIRVGKPSDSDTNFGPLASAAQLDKVLGYIDSGKAEGAKLLAGGARLVNDHFASGQYVAPTVFGDCRDDMRI 382
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: BETB_BURP0 (Betaine aldehyde dehydrogenase OS=Burkholderia pseudomallei (strain 1106a) GN=betB PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.907e-29 Identity = 84/249 (33.73%), Postives = 124/249 (49.80%), Query Frame = 1 Query: 13 YCLTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAGMIPLQ---MELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPPEES-CDITPVVSESSANFIEGLVMDAKQK-------GATFCQEYRREGNLIWPLLLDNVRPDMRI 723 + T PLGV I +NYP+ +A K APAL AGN+++ KP ++AL + + AG P G+ + V G GS +G L+ HP + +SFTGG +TG + AG L+ MELGGK IV +DADLD A + F +GQ CT V V ++V D+ + VG P +S + P+ S + + + G + K + GA ++ G + P + + R DMRI Sbjct: 135 FVYTRREPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKPSEVTPLSALKLAEIYTEAGVPAGVFNVVQGDGS-VGALLSAHPGIAKVSFTGGVETGKKVMSLAGASSLKEVTMELGGKSPLIVFDDADLDRAADIAVTANFFSAGQVCTNGTRVFVQQAVKDAFVERVLARVARIRVGKPSDSDTNFGPLASAAQLDKVLGYIDSGKAEGAKLLAGGARLVNDHFASGQYVAPTVFGDCRDDMRI 382
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: BETB_BURM1 (Betaine aldehyde dehydrogenase OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=betB PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.907e-29 Identity = 86/249 (34.54%), Postives = 124/249 (49.80%), Query Frame = 1 Query: 13 YCLTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAGMIPLQ---MELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPPEES-CDITPVVSESSANFIEGLVMDAKQKGA-------TFCQEYRREGNLIWPLLLDNVRPDMRI 723 + T PLGV I +NYP+ +A K APAL AGN++V KP ++AL + + AG P G+ + V G GS +G LT HP + +SFTGG +TG + AG L+ MELGGK IV +DADLD A + F SGQ CT V V S+ D+ + VG P ++ + P+VS + + + G + K +GA + + G + P + + R DM+I Sbjct: 135 FVYTRREPLGVCAGIGAWNYPIQIACWKTAPALAAGNAMVFKPSEVTPLSALKLAEIYTEAGVPAGVFNVVQGDGS-VGALLTGHPDIAKVSFTGGVETGKKVMSLAGASSLKEVTMELGGKSPLIVFDDADLDRAADIAVTANFFSSGQVCTNGTRVFVHRSIKDAFTQKVLERVKRIRVGKPTDADTNFGPLVSAAQLDKVLGFIESGKAEGAKLLAGGTRLTEGHFANGQYVAPTVFGDCRDDMKI 382 The following BLAST results are available for this feature:
BLAST of CX296726 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296726 ID=CX296726; Name=CX296726; organism=Citrus clementina; type=EST; length=724bpback to top |