CX296726

Overview
NameCX296726
Unique NameCX296726
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length724
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig12872 contig Ccv1_Contig12872:500..1223. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: AL1A3_HUMAN (Aldehyde dehydrogenase family 1 member A3 OS=Homo sapiens GN=ALDH1A3 PE=1 SV=2)

HSP 1 Score: 129.413 bits (324), Expect = 1.907e-29
Identity = 86/244 (35.25%), Postives = 124/244 (50.82%), Query Frame = 1
Query:   16 CLTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAGMIPLQ---MELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATF-C--QEYRREGNLIWPLLLDNVRPDMRI 723
            C T + P+GV  AI P+N+P+ + V K+APAL  GN++VLKP  Q  + AL++      AGFP G+++ V G G  +G  ++ HP +N I+FTG  + G  + + A    L+   +ELGGK+ CIV  DADLDL      +G F   GQ CTA   V V E V                VG P +   +  P + +   + I  L+   K++GA   C       +G  I P +   V  +MRI
Sbjct:  164 CFTRHEPIGVCGAITPWNFPLLMLVWKLAPALCCGNTMVLKPAEQTPLTALYLGSLIKEAGFPPGVVNIVPGFGPTVGAAISSHPQINKIAFTGSTEVGKLVKEAASRSNLKRVTLELGGKNPCIVCADADLDLAVECAHQGVFFNQGQCCTAASRVFVEEQVYSEFVRRSVEYAKKRPVGDPFDVKTEQGPQIDQKQFDKILELIESGKKEGAKLECGGSAMEDKGLFIKPTVFSEVTDNMRI 407          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ROCA_BACHK (1-pyrroline-5-carboxylate dehydrogenase OS=Bacillus thuringiensis subsp. konkukian GN=rocA PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.491e-29
Identity = 82/250 (32.80%), Postives = 131/250 (52.40%), Query Frame = 1
Query:   10 KYCLTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAGMI-PLQM-------ELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPPEE-SCDITPVVSESSANFIEGLVMDAKQKGATFC--QEYRREGNLIWPLLLDNVRPDMRI 723
            +Y   S IPLGV + I P+N+P  +       AL++GN+++LKP +   V A   +     AG P G+++ V G GSE+GD+L  HP    ISFTG  D GI I ++A  + P Q+       E+GGKD  +V ++ADL+L A +I+   F +SGQ+C+A    ++ E V D +          LTV  P     ++ PV  +++ + +   V   K++G      +    +G  I P ++ +V  D R+
Sbjct:  163 EYNRFSYIPLGVGVIISPWNFPFAIMAGMTTAALVSGNTVLLKPASTTPVVAAKFMEVLEEAGLPAGVVNFVPGNGSEVGDYLVDHPRTRFISFTGSRDVGIRIYERAAKVNPGQIWLKRVIAEMGGKDTIVVDKEADLELAAKSIVASAFGFSGQKCSACSRAVIHEDVYDHVLNRAVELTKELTVANPAVLGTNMGPVNDQAAFDKVMSYVAIGKEEGRILAGGEGDDSKGWFIQPTIVADVAEDARL 412          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ROCA_BACCZ (1-pyrroline-5-carboxylate dehydrogenase OS=Bacillus cereus (strain ZK / E33L) GN=rocA PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.491e-29
Identity = 82/250 (32.80%), Postives = 131/250 (52.40%), Query Frame = 1
Query:   10 KYCLTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAGMI-PLQM-------ELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPPEE-SCDITPVVSESSANFIEGLVMDAKQKGATFC--QEYRREGNLIWPLLLDNVRPDMRI 723
            +Y   S IPLGV + I P+N+P  +       AL++GN+++LKP +   V A   +     AG P G+++ V G GSE+GD+L  HP    ISFTG  D GI I ++A  + P Q+       E+GGKD  +V ++ADL+L A +I+   F +SGQ+C+A    ++ E V D +          LTV  P     ++ PV  +++ + +   V   K++G      +    +G  I P ++ +V  D R+
Sbjct:  163 EYNRFSYIPLGVGVIISPWNFPFAIMAGMTTAALVSGNTVLLKPASTTPVVAAKFMEVLEEAGLPAGVVNFVPGNGSEVGDYLVDHPRTRFISFTGSRDVGIRIYERAAKVNPGQIWLKRVIAEMGGKDTIVVDKEADLELAAKSIVASAFGFSGQKCSACSRAVIHEDVYDHVLNRAVELTKELTVANPAVLGTNMGPVNDQAAFDKVMSYVAIGKEEGRILAGGEGDDSKGWFIQPTIVADVAEDARL 412          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ROCA_BACCQ (1-pyrroline-5-carboxylate dehydrogenase OS=Bacillus cereus (strain Q1) GN=rocA PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.491e-29
Identity = 82/250 (32.80%), Postives = 131/250 (52.40%), Query Frame = 1
Query:   10 KYCLTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAGMI-PLQM-------ELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPPEE-SCDITPVVSESSANFIEGLVMDAKQKGATFC--QEYRREGNLIWPLLLDNVRPDMRI 723
            +Y   S IPLGV + I P+N+P  +       AL++GN+++LKP +   V A   +     AG P G+++ V G GSE+GD+L  HP    ISFTG  D GI I ++A  + P Q+       E+GGKD  +V ++ADL+L A +I+   F +SGQ+C+A    ++ E V D +          LTV  P     ++ PV  +++ + +   V   K++G      +    +G  I P ++ +V  D R+
Sbjct:  163 EYNRFSYIPLGVGVIISPWNFPFAIMAGMTTAALVSGNTVLLKPASTTPVVAAKFMEVLEEAGLPAGVVNFVPGNGSEVGDYLVDHPRTRFISFTGSRDVGIRIYERAAKVNPGQIWLKRVIAEMGGKDTIVVDKEADLELAAKSIVASAFGFSGQKCSACSRAVIHEDVYDHVLNRAVELTKELTVANPAVLGTNMGPVNDQAAFDKVMSYVAIGKEEGRILAGGEGDDSKGWFIQPTIVADVAEDARL 412          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ROCA_BACC7 (1-pyrroline-5-carboxylate dehydrogenase OS=Bacillus cereus (strain AH187) GN=rocA PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.491e-29
Identity = 82/250 (32.80%), Postives = 131/250 (52.40%), Query Frame = 1
Query:   10 KYCLTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAGMI-PLQM-------ELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPPEE-SCDITPVVSESSANFIEGLVMDAKQKGATFC--QEYRREGNLIWPLLLDNVRPDMRI 723
            +Y   S IPLGV + I P+N+P  +       AL++GN+++LKP +   V A   +     AG P G+++ V G GSE+GD+L  HP    ISFTG  D GI I ++A  + P Q+       E+GGKD  +V ++ADL+L A +I+   F +SGQ+C+A    ++ E V D +          LTV  P     ++ PV  +++ + +   V   K++G      +    +G  I P ++ +V  D R+
Sbjct:  163 EYNRFSYIPLGVGVIISPWNFPFAIMAGMTTAALVSGNTVLLKPASTTPVVAAKFMEVLEEAGLPAGVVNFVPGNGSEVGDYLVDHPRTRFISFTGSRDVGIRIYERAAKVNPGQIWLKRVIAEMGGKDTIVVDKEADLELAAKSIVASAFGFSGQKCSACSRAVIHEDVYDHVLNRAVELTKELTVANPAVLGTNMGPVNDQAAFDKVMSYVAIGKEEGRILAGGEGDDSKGWFIQPTIVADVAEDARL 412          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ROCA_BACC3 (1-pyrroline-5-carboxylate dehydrogenase OS=Bacillus cereus (strain 03BB102) GN=rocA PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.491e-29
Identity = 82/250 (32.80%), Postives = 131/250 (52.40%), Query Frame = 1
Query:   10 KYCLTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAGMI-PLQM-------ELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPPEE-SCDITPVVSESSANFIEGLVMDAKQKGATFC--QEYRREGNLIWPLLLDNVRPDMRI 723
            +Y   S IPLGV + I P+N+P  +       AL++GN+++LKP +   V A   +     AG P G+++ V G GSE+GD+L  HP    ISFTG  D GI I ++A  + P Q+       E+GGKD  +V ++ADL+L A +I+   F +SGQ+C+A    ++ E V D +          LTV  P     ++ PV  +++ + +   V   K++G      +    +G  I P ++ +V  D R+
Sbjct:  163 EYNRFSYIPLGVGVIISPWNFPFAIMAGMTTAALVSGNTVLLKPASTTPVVAAKFMEVLEEAGLPAGVVNFVPGNGSEVGDYLVDHPRTRFISFTGSRDVGIRIYERAAKVNPGQIWLKRVIAEMGGKDTIVVDKEADLELAAKSIVASAFGFSGQKCSACSRAVIHEDVYDHVLNRAVELTKELTVANPAVLGTNMGPVNDQAAFDKVMSYVAIGKEEGRILAGGEGDDSKGWFIQPTIVADVAEDARL 412          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ROCA_BACC1 (1-pyrroline-5-carboxylate dehydrogenase OS=Bacillus cereus (strain ATCC 10987) GN=rocA PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.491e-29
Identity = 82/250 (32.80%), Postives = 131/250 (52.40%), Query Frame = 1
Query:   10 KYCLTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAGMI-PLQM-------ELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPPEE-SCDITPVVSESSANFIEGLVMDAKQKGATFC--QEYRREGNLIWPLLLDNVRPDMRI 723
            +Y   S IPLGV + I P+N+P  +       AL++GN+++LKP +   V A   +     AG P G+++ V G GSE+GD+L  HP    ISFTG  D GI I ++A  + P Q+       E+GGKD  +V ++ADL+L A +I+   F +SGQ+C+A    ++ E V D +          LTV  P     ++ PV  +++ + +   V   K++G      +    +G  I P ++ +V  D R+
Sbjct:  163 EYNRFSYIPLGVGVIISPWNFPFAIMAGMTTAALVSGNTVLLKPASTTPVVAAKFMEVLEEAGLPAGVVNFVPGSGSEVGDYLVDHPRTRFISFTGSRDVGIRIYERAAKVNPGQIWLKRVIAEMGGKDTIVVDKEADLELAAKSIVASAFGFSGQKCSACSRAVIHEDVYDHVLNRAVELTKELTVANPAVLGTNMGPVNDQAAFDKVMSYVAIGKEEGRILAGGEGDDSKGWFIQPTIVADVAEDARL 412          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ROCA_BACC0 (1-pyrroline-5-carboxylate dehydrogenase OS=Bacillus cereus (strain AH820) GN=rocA PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.491e-29
Identity = 82/250 (32.80%), Postives = 131/250 (52.40%), Query Frame = 1
Query:   10 KYCLTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAGMI-PLQM-------ELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPPEE-SCDITPVVSESSANFIEGLVMDAKQKGATFC--QEYRREGNLIWPLLLDNVRPDMRI 723
            +Y   S IPLGV + I P+N+P  +       AL++GN+++LKP +   V A   +     AG P G+++ V G GSE+GD+L  HP    ISFTG  D GI I ++A  + P Q+       E+GGKD  +V ++ADL+L A +I+   F +SGQ+C+A    ++ E V D +          LTV  P     ++ PV  +++ + +   V   K++G      +    +G  I P ++ +V  D R+
Sbjct:  163 EYNRFSYIPLGVGVIISPWNFPFAIMAGMTTAALVSGNTVLLKPASTTPVVAAKFMEVLEEAGLPAGVVNFVPGNGSEVGDYLVDHPRTRFISFTGSRDVGIRIYERAAKVNPGQIWLKRVIAEMGGKDTIVVDKEADLELAAKSIVASAFGFSGQKCSACSRAVIHEDVYDHVLNRAVELTKELTVANPAVLGTNMGPVNDQAAFDKVMSYVAIGKEEGRILAGGEGDDSKGWFIQPTIVADVAEDARL 412          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ROCA_BACAN (1-pyrroline-5-carboxylate dehydrogenase OS=Bacillus anthracis GN=rocA PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.491e-29
Identity = 82/250 (32.80%), Postives = 131/250 (52.40%), Query Frame = 1
Query:   10 KYCLTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAGMI-PLQM-------ELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPPEE-SCDITPVVSESSANFIEGLVMDAKQKGATFC--QEYRREGNLIWPLLLDNVRPDMRI 723
            +Y   S IPLGV + I P+N+P  +       AL++GN+++LKP +   V A   +     AG P G+++ V G GSE+GD+L  HP    ISFTG  D GI I ++A  + P Q+       E+GGKD  +V ++ADL+L A +I+   F +SGQ+C+A    ++ E V D +          LTV  P     ++ PV  +++ + +   V   K++G      +    +G  I P ++ +V  D R+
Sbjct:  163 EYNRFSYIPLGVGVIISPWNFPFAIMAGMTTAALVSGNTVLLKPASTTPVVAAKFMEVLEEAGLPAGVVNFVPGNGSEVGDYLVDHPRTRFISFTGSRDVGIRIYERAAKVNPGQIWLKRVIAEMGGKDTIVVDKEADLELAAKSIVASAFGFSGQKCSACSRAVIHEDVYDHVLNRAVELTKELTVANPAVLGTNMGPVNDQAAFDKVMSYVAIGKEEGRILAGGEGDDSKGWFIQPTIVADVAEDARL 412          
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ROCA_BACAH (1-pyrroline-5-carboxylate dehydrogenase OS=Bacillus thuringiensis (strain Al Hakam) GN=rocA PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.491e-29
Identity = 82/250 (32.80%), Postives = 131/250 (52.40%), Query Frame = 1
Query:   10 KYCLTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAGMI-PLQM-------ELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPPEE-SCDITPVVSESSANFIEGLVMDAKQKGATFC--QEYRREGNLIWPLLLDNVRPDMRI 723
            +Y   S IPLGV + I P+N+P  +       AL++GN+++LKP +   V A   +     AG P G+++ V G GSE+GD+L  HP    ISFTG  D GI I ++A  + P Q+       E+GGKD  +V ++ADL+L A +I+   F +SGQ+C+A    ++ E V D +          LTV  P     ++ PV  +++ + +   V   K++G      +    +G  I P ++ +V  D R+
Sbjct:  163 EYNRFSYIPLGVGVIISPWNFPFAIMAGMTTAALVSGNTVLLKPASTTPVVAAKFMEVLEEAGLPAGVVNFVPGNGSEVGDYLVDHPRTRFISFTGSRDVGIRIYERAAKVNPGQIWLKRVIAEMGGKDTIVVDKEADLELAAKSIVASAFGFSGQKCSACSRAVIHEDVYDHVLNRAVELTKELTVANPAVLGTNMGPVNDQAAFDKVMSYVAIGKEEGRILAGGEGDDSKGWFIQPTIVADVAEDARL 412          
The following BLAST results are available for this feature:
BLAST of CX296726 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
AL1A3_HUMAN1.907e-2935.25Aldehyde dehydrogenase family 1 member A3 OS=Homo ... [more]
ROCA_BACHK2.491e-2932.801-pyrroline-5-carboxylate dehydrogenase OS=Bacillu... [more]
ROCA_BACCZ2.491e-2932.801-pyrroline-5-carboxylate dehydrogenase OS=Bacillu... [more]
ROCA_BACCQ2.491e-2932.801-pyrroline-5-carboxylate dehydrogenase OS=Bacillu... [more]
ROCA_BACC72.491e-2932.801-pyrroline-5-carboxylate dehydrogenase OS=Bacillu... [more]
ROCA_BACC32.491e-2932.801-pyrroline-5-carboxylate dehydrogenase OS=Bacillu... [more]
ROCA_BACC12.491e-2932.801-pyrroline-5-carboxylate dehydrogenase OS=Bacillu... [more]
ROCA_BACC02.491e-2932.801-pyrroline-5-carboxylate dehydrogenase OS=Bacillu... [more]
ROCA_BACAN2.491e-2932.801-pyrroline-5-carboxylate dehydrogenase OS=Bacillu... [more]
ROCA_BACAH2.491e-2932.801-pyrroline-5-carboxylate dehydrogenase OS=Bacillu... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC05802B04SK FerrChloL1 Citrus clementina cDNA clone C05802B04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296726 ID=CX296726; Name=CX296726; organism=Citrus clementina; type=EST; length=724bp
GAGAGGACTAAATATTGTCTCACTTCAAACATTCCACTTGGTGTGGTTTT
GGCCATTCCACCATTCAACTATCCAGTCAATCTTGCCGTTTCCAAAATTG
CTCCTGCACTGATTGCTGGAAATTCCCTTGTGCTTAAGCCTCCTACTCAG
GGTGCTGTTGCTGCGCTTCACATGGTGCATTGCTTTCACTTGGCTGGTTT
TCCTAAAGGTCTTATAAGCTGTGTCACCGGGAAAGGTTCTGAGATTGGTG
ATTTCCTTACTATGCATCCTGCAGTGAACTGTATAAGCTTCACTGGTGGA
GACACTGGAATTTCAATCTCTAAGAAGGCTGGAATGATCCCTCTTCAGAT
GGAGTTGGGAGGCAAAGATGCTTGTATCGTGCTTGAGGATGCTGACCTTG
ATTTGGTTGCCGCAAACATAATAAAAGGAGGATTTTCTTACAGTGGTCAA
AGATGCACTGCAGTTAAGGTTGTCTTGGTGATGGAATCTGTAGCAGATTC
CCTGGTCGAGAAGGTTAAGGCTAAAGTGGTGAAACTGACAGTTGGCCCTC
CTGAAGAAAGCTGTGATATCACTCCAGTTGTGTCGGAATCATCTGCAAAT
TTCATTGAAGGGCTGGTTATGGATGCCAAACAGAAAGGAGCAACATTCTG
TCAAGAGTACAGGAGAGAAGGCAACCTCATCTGGCCCTTGTTGCTTGACA
ATGTTAGGCCCGATATGAGGATCG
back to top