CX296726
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: AL1A1_RABIT (Retinal dehydrogenase 1 OS=Oryctolagus cuniculus GN=ALDH1A1 PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.698e-28 Identity = 81/245 (33.06%), Postives = 123/245 (50.20%), Query Frame = 1 Query: 13 YCLTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAGMIPLQ---MELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATF-C--QEYRREGNLIWPLLLDNVRPDMRI 723 +C T + P+GV I P+N+P+ + + KI PAL GN++++KP Q + ALH+ AGFP G+++ V G G G ++ H ++ ++FTG + G I + AG L+ +ELGGK CIV DADLD +G F + GQ C A + V ES+ D +G P + P + + N I L+ K++GA C + +G I P + NV +MRI Sbjct: 147 FCYTRHEPVGVCGQIIPWNFPLVMLIWKIGPALSCGNTVIVKPAEQTPLTALHVASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDIDKVAFTGSTEVGKLIKEAAGKSNLKRVTLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLAPEVNQGPQIDKEQYNKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSNVTDEMRI 391
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: ABDH_PECCP (Gamma-aminobutyraldehyde dehydrogenase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=PC1_1415 PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.698e-28 Identity = 79/203 (38.92%), Postives = 112/203 (55.17%), Query Frame = 1 Query: 34 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISI-SKKAGMIP-LQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPP-EESCDITPVVSESSANFIEGLVMDAK 630 P+GVV +I P+NYP+ +A K+APAL AGN +VLKP Q + ++ H P G+++ V G+G++IGD LT H VN +S TG TG I S A + MELGGK IV +DAD+D V I GF +GQ CTA + V +V D + L +G P +E+ ++ P+++E + G V AK Sbjct: 138 PVGVVASIAPWNYPLMMASWKLAPALAAGNCVVLKPAEQTPLTTFYLAHLL-AEILPAGVVNIVFGRGADIGDALTGHEKVNMVSLTGSIATGAHILSHTASSVKRTHMELGGKAPVIVFDDADIDQVVDGIRSFGFYNAGQDCTAACRLYVQRAVYDKVVEALGNAVATLKMGDPHDETTELGPLITEQQLERVVGFVERAK 339
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: BETB_PSEU5 (Betaine aldehyde dehydrogenase OS=Pseudomonas stutzeri (strain A1501) GN=betB PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 6.136e-28 Identity = 84/252 (33.33%), Postives = 122/252 (48.41%), Query Frame = 1 Query: 7 TKYCLTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAGMIPLQ---MELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVG-PPEESCDITPVVSESSANFIEGLVMDAKQKGATFC--------QEYRREGNLIWPLLLDNVRPDMRI 723 + + T PLGVV I +NYP+ +A+ K APAL AGN+++ KP ++AL + F AG P G+ + +TG G+ +G +T HP + +SFTGG TG + A L+ MELGGK IV EDADLD A + F SGQ CT V + + S + +G P +E+ + P+VS + + + + K GA EY R G + P + + DM I Sbjct: 133 SSFVYTRREPLGVVAGIGAWNYPIQIALWKAAPALAAGNAMIFKPSEVTPLSALRLAEIFSEAGLPDGVFNVLTGSGAGVGALITEHPRIAKVSFTGGVATGKKVMASAAGSSLKDVTMELGGKSPLIVCEDADLDRAADIAVMANFFSSGQVCTNGTRVFIPAGLKASFEAKLLERVQRVRLGDPQQEATNFGPLVSFAHMDKVLDYIAQGKAAGARILCGGERVTEGEYAR-GAFVAPTIFSDCSDDMSI 383
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: BETB_ACIBT (Betaine aldehyde dehydrogenase OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=betB PE=3 SV=2) HSP 1 Score: 124.405 bits (311), Expect = 6.136e-28 Identity = 78/217 (35.94%), Postives = 109/217 (50.23%), Query Frame = 1 Query: 7 TKYCLTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAGMIPLQ---MELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGA 642 + + T PLGVV I +NYP+ +A+ K APAL AGN+++ KP + AL + + AG P G+ + V G G EIG +LT HP + ISFTGG +TG + A L+ MELGGK I+ EDADL+ A + F SGQ CT V V +S+ + +G P E + P+ S + + KQ+GA Sbjct: 133 SSFFYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSETTPLTALKLAEIYTEAGLPDGVFNVVQGAGREIGQWLTEHPVIEKISFTGGVETGKKVMASAAGSTLKEVTMELGGKSPLIICEDADLNRAADIAVMANFFSSGQVCTNGTRVFVPKSLLVDFEKAVVERVKRIRIGDPMAEDTNFGPLTSFPHMEKVLSFIESGKQQGA 349
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: BETB_PSEAB (Betaine aldehyde dehydrogenase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=betB PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 8.014e-28 Identity = 85/251 (33.86%), Postives = 117/251 (46.61%), Query Frame = 1 Query: 7 TKYCLTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAGMIPLQ---MELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVG-PPEESCDITPVVSESSANFIEGLVMDAK-QKGATFCQEYR------REGNLIWPLLLDNVRPDMRI 723 T + T PLGVV I +NYPV +A+ K APAL AGN+++ KP + L + + AG P G+ + +TG G E+G +LT HP + ISFTGG TG + A L+ MELGGK I+ DADLD A + F SGQ CT V + S + +G P +E+ + P+VS + G + K QK C R G + P + + DM I Sbjct: 133 TSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTTLKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGNGAYVAPTVFTDCSDDMTI 383
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: AL1A1_RAT (Retinal dehydrogenase 1 OS=Rattus norvegicus GN=Aldh1a1 PE=1 SV=3) HSP 1 Score: 124.02 bits (310), Expect = 8.014e-28 Identity = 82/245 (33.47%), Postives = 121/245 (49.39%), Query Frame = 1 Query: 13 YCLTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAGMIPLQ---MELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATF-C--QEYRREGNLIWPLLLDNVRPDMRI 723 + T P+GV I P+N+P+ + + KI PAL GN++V+KP Q + ALHM AGFP G+++ V G G G ++ H V+ ++FTG G I + AG L+ +ELGGK CIV DADLD+ G F + GQ C A + V ESV D +G P + + P + + + I L+ K++GA C + +G + P + NV +MRI Sbjct: 152 FTFTRREPIGVCGQIIPWNFPLLMFIWKIGPALSCGNTVVVKPAEQTPLTALHMASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTQVGKLIKEAAGKSNLKRVTLELGGKSPCIVFADADLDIAVEFAHHGVFYHQGQCCVAASRIFVEESVYDEFVRKSVERAKKYVLGNPLTQGINQGPQIDKEQHDKILDLIESGKKEGAKLECGGGRWGNKGFFVQPTVFSNVTDEMRI 396
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: BETB_PSEPG (Betaine aldehyde dehydrogenase OS=Pseudomonas putida (strain GB-1) GN=betB PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.047e-27 Identity = 78/251 (31.08%), Postives = 123/251 (49.00%), Query Frame = 1 Query: 7 TKYCLTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGGDTG----ISISKKAGMIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPPE-ESCDITPVVSESSANFIEGLVMDAKQKGA-TFCQEYR------REGNLIWPLLLDNVRPDMRI 723 + + T PLGV + I +NYP+ +A+ K APAL AGN+++ KP ++ L + + AG P G+ + +TG G E+G +LT HP + +SFTGG T ++ + + + + MELGGK I+ DADLD A + F SGQ CT V + + + + VG PE E+ + P+VS + + + K++GA C R +G + P + + DM I Sbjct: 133 SSFVYTRREPLGVTVGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTSLTTLKLAEIYTEAGLPNGVFNVLTGSGREVGTWLTEHPRIEKVSFTGGTTTGKKVMASASSSSLKEVTMELGGKSPLIICADADLDKAADIAMMANFYSSGQVCTNGTRVFIPAEMKAAFEAKIAERVARIRVGNPEDENTNFGPLVSFAHMENVLSYIAKGKEEGARVLCGGERLTEGEFAKGAFVAPTVFTDCSDDMTI 383
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: BETB_ACIBY (Betaine aldehyde dehydrogenase OS=Acinetobacter baumannii (strain AYE) GN=betB PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.047e-27 Identity = 79/217 (36.41%), Postives = 108/217 (49.77%), Query Frame = 1 Query: 7 TKYCLTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAGMIPLQ---MELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGA 642 + + T PLGVV I +NYP+ +A+ K APAL AGN+++ KP + AL + + AG P G+ + V G G EIG +LT HP + ISFTGG +TG + A L+ MELGGK I+ EDADL+ A + F SGQ CT V V +S + VG P E + P+ S + + KQ+GA Sbjct: 133 SSFFYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSETTPLTALKLAEIYTEAGLPDGVFNVVQGAGREIGQWLTEHPVIEKISFTGGVETGKKVMASAAGSTLKEVTMELGGKSPLIICEDADLNRAADIAVMANFFSSGQVCTNGTRVFVPKSRLADFEKAVVERVKRIRVGDPMAEDTNFGPLTSFPHMEKVLSFIESGKQQGA 349
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: BETB_ACIB5 (Betaine aldehyde dehydrogenase OS=Acinetobacter baumannii (strain AB0057) GN=betB PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.047e-27 Identity = 79/217 (36.41%), Postives = 108/217 (49.77%), Query Frame = 1 Query: 7 TKYCLTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAGMIPLQ---MELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGA 642 + + T PLGVV I +NYP+ +A+ K APAL AGN+++ KP + AL + + AG P G+ + V G G EIG +LT HP + ISFTGG +TG + A L+ MELGGK I+ EDADL+ A + F SGQ CT V V +S + VG P E + P+ S + + KQ+GA Sbjct: 133 SSFFYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSETTPLTALKLAEIYTEAGLPDGVFNVVQGAGREIGQWLTEHPVIEKISFTGGVETGKKVMASAAGSTLKEVTMELGGKSPLIICEDADLNRAADIAVMANFFSSGQVCTNGTRVFVPKSRLADFEKAVVERVKRIRVGDPMAEDTNFGPLTSFPHMEKVLSFIESGKQQGA 349
BLAST of CX296726 vs. ExPASy Swiss-Prot
Match: BETB_ACIB3 (Betaine aldehyde dehydrogenase OS=Acinetobacter baumannii (strain AB307-0294) GN=betB PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.047e-27 Identity = 79/217 (36.41%), Postives = 108/217 (49.77%), Query Frame = 1 Query: 7 TKYCLTSNIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAGMIPLQ---MELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXXLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGA 642 + + T PLGVV I +NYP+ +A+ K APAL AGN+++ KP + AL + + AG P G+ + V G G EIG +LT HP + ISFTGG +TG + A L+ MELGGK I+ EDADL+ A + F SGQ CT V V +S + VG P E + P+ S + + KQ+GA Sbjct: 133 SSFFYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSETTPLTALKLAEIYTEAGLPDGVFNVVQGAGREIGQWLTEHPVIEKISFTGGVETGKKVMASAAGSTLKEVTMELGGKSPLIICEDADLNRAADIAVMANFFSSGQVCTNGTRVFVPKSRLADFEKAVVERVKRIRVGDPMAEDTNFGPLTSFPHMEKVLSFIESGKQQGA 349 The following BLAST results are available for this feature:
BLAST of CX296726 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296726 ID=CX296726; Name=CX296726; organism=Citrus clementina; type=EST; length=724bpback to top |