CX296731
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296731 vs. ExPASy Swiss-Prot
Match: CB24_TOBAC (Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum GN=CAB40 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.679e-13 Identity = 62/193 (32.12%), Postives = 79/193 (40.93%), Query Frame = 1 Query: 7 LAGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFV-------GQAWSGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFEA 528 L G PGDYG+D GL DP RE E+IH RWAM +G G + WF+AG+ +P + S ++ Q++LMG VE R A + YPGG FDPL LA D E LKV EIK+ RLAM +M F+ +A Sbjct: 71 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEG--------------------YRVAGGPLGEVVDPLYPGGS-FDPLGLA---------EDPEAFAELKVKEIKNGRLAMFSMFGFFVQA 233
BLAST of CX296731 vs. ExPASy Swiss-Prot
Match: CB22_MAIZE (Chlorophyll a-b binding protein, chloroplastic OS=Zea mays PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.679e-13 Identity = 63/193 (32.64%), Postives = 81/193 (41.97%), Query Frame = 1 Query: 7 LAGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFV-------GQAWSGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFEA 528 L G PGDYG+D GL DP RE E+IH RWAM +G G + WF+AG+ +P I S ++ Q++LMG VE R P + V + YPGG FDPL LA D E LKV E+K RLAM++M F+ +A Sbjct: 69 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG--GPLGEVV------------------DPLYPGGS-FDPLGLA---------DDPEAFGELKVKELKKGRLAMLSMFGFFVQA 231
BLAST of CX296731 vs. ExPASy Swiss-Prot
Match: CB21_TOBAC (Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana tabacum GN=CAB16 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.679e-13 Identity = 62/193 (32.12%), Postives = 79/193 (40.93%), Query Frame = 1 Query: 7 LAGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFV-------GQAWSGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFEA 528 L G PGDYG+D GL DP RE E+IH RWAM +G G + WF+AG+ +P + S ++ Q++LMG VE R A + YPGG FDPL LA D E LKV EIK+ RLAM +M F+ +A Sbjct: 70 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEG--------------------YRVAGGPLGEVVDPLYPGGS-FDPLGLA---------EDPEAFAELKVKEIKNGRLAMFSMFGFFVQA 232
BLAST of CX296731 vs. ExPASy Swiss-Prot
Match: CB24_PETSP (Chlorophyll a-b binding protein 25, chloroplastic OS=Petunia sp. GN=CAB25 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.723e-13 Identity = 62/193 (32.12%), Postives = 79/193 (40.93%), Query Frame = 1 Query: 7 LAGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFV-------GQAWSGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFEA 528 L G PGDYG+D GL DP RE E+IH RWAM +G G + WF+AG+ +P + S ++ Q++LMG VE R A + YPGG FDPL LA D E LKV EIK+ RLAM +M F+ +A Sbjct: 70 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEG--------------------YRVAGGPLGEVIDPLYPGGS-FDPLGLA---------DDPEAFAELKVKEIKNGRLAMFSMFGFFVQA 232
BLAST of CX296731 vs. ExPASy Swiss-Prot
Match: CB23_TOBAC (Chlorophyll a-b binding protein 36, chloroplastic OS=Nicotiana tabacum GN=CAB36 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.723e-13 Identity = 62/193 (32.12%), Postives = 83/193 (43.01%), Query Frame = 1 Query: 7 LAGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFV-------GQAWSGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFEA 528 L G PGDYG+D GL DP RE E+IH RWAM +G G + WF+AG+ +P I S ++ +Q++LMG +E R P + ++ + YPGG F DPL LA D E LKV EIK+ RLAM +M F+ +A Sbjct: 69 LTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAVWASQVVLMGLIEGYRVGG--GPLGEGLD------------------KIYPGGAF-DPLGLAD---------DPEAFAELKVKEIKNGRLAMFSMFGFFVQA 231
BLAST of CX296731 vs. ExPASy Swiss-Prot
Match: CB21_PEA (Chlorophyll a-b binding protein AB96 (Fragment) OS=Pisum sativum GN=AB96 PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.139e-12 Identity = 62/193 (32.12%), Postives = 80/193 (41.45%), Query Frame = 1 Query: 7 LAGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFV-------GQAWSGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFEA 528 L G PGDYG+D GL DP RE E+IH RWAM +G G + WF+AG+ +P + S ++ TQ++LMG VE R P + V + YPGG FDPL LA E LKV E+K+ RLAM +M F+ A Sbjct: 32 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAG--GPLGEVV------------------DPLYPGGS-FDPLGLAEV---------PEAFAELKVKELKNGRLAMFSMFGFFVPA 194
BLAST of CX296731 vs. ExPASy Swiss-Prot
Match: CB121_HORVU (Chlorophyll a-b binding protein 1B-21, chloroplastic OS=Hordeum vulgare GN=LHC Ib-21 PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.139e-12 Identity = 55/181 (30.39%), Postives = 83/181 (45.86%), Query Frame = 1 Query: 7 LAGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFV-----------GQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIF 516 L GS PGD+GFDPLGL P + ++E+E+ H RWAM V G+ V Q W+ +P +A + + ++L + L + + E +R ++ +PE + YPGG FDPL + D K + LK+ EIK+ RLAM+A + F Sbjct: 58 LDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPGVLVPEALGLGNWVKAQEWAALPDGQATYLGNPVPWGNLPTILAIEFLAIAFAEQQRTME-KDPEKKK----------------------YPGGA-FDPL---------GFSKDPAKFEELKLKEIKNGRLAMLAFVGF 205
BLAST of CX296731 vs. ExPASy Swiss-Prot
Match: CB2A_PYRPY (Chlorophyll a-b binding protein 1A, chloroplastic OS=Pyrus pyrifolia PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.488e-12 Identity = 62/193 (32.12%), Postives = 81/193 (41.97%), Query Frame = 1 Query: 7 LAGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQ--AWSGIP-----WFEAGAD------------PGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFEA 528 L G PGDYG+D GL DP RE E+IH RWAM +G + A +G+ WF+AGA P I S ++ Q++LMG +E R A + YPGG F DPL LA D + +KV EIK+ RLAM +M F+ +A Sbjct: 82 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWACQVILMGAIEGYR--------------------VAGGPLGEVTDPIYPGGNF-DPLGLAD---------DPDAFADVKVKEIKNGRLAMFSMFGFFVQA 244
BLAST of CX296731 vs. ExPASy Swiss-Prot
Match: CB23_PETSP (Chlorophyll a-b binding protein 22R, chloroplastic OS=Petunia sp. GN=CAB22R PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.488e-12 Identity = 64/193 (33.16%), Postives = 81/193 (41.97%), Query Frame = 1 Query: 7 LAGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQ--AWSGIP-----WFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFEA 528 L G P DYG+D GL DP RE E+IH RWAM +G + A +GI WF+AGA +P + S ++ Q++LMG VE R A + YPGG FDPL LA D E LKV EIK+ RLAM +M F+ +A Sbjct: 71 LTGEFPSDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGIKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEG--------------------YRVAGGPLGEVIDPLYPGGS-FDPLGLA---------EDPEAFAELKVKEIKNGRLAMFSMFGFFVQA 233
BLAST of CX296731 vs. ExPASy Swiss-Prot
Match: CB21_GOSHI (Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 1.488e-12 Identity = 62/193 (32.12%), Postives = 82/193 (42.49%), Query Frame = 1 Query: 7 LAGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFV-------GQAWSGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFEA 528 L G PGDYG+D GL DP RE E+IH RWAM +G G + WF+AG+ +P I S ++ Q++LMG+VE R P + ++ YPGG F DPL LA D + LKV EIK+ RLAM +M F+ +A Sbjct: 69 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGG--GPLGEGLDPI------------------YPGGAF-DPLGLAD---------DPDAFAELKVKEIKNGRLAMFSMFGFFVQA 231 The following BLAST results are available for this feature:
BLAST of CX296731 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 69
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX296731 ID=CX296731; Name=CX296731; organism=Citrus clementina; type=EST; length=689bpback to top |