CX296740
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296740 vs. ExPASy Swiss-Prot
Match: RS3A_PARBD (40S ribosomal protein S1 OS=Paracoccidioides brasiliensis (strain Pb18) GN=RPS1 PE=3 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 3.700e-51 Identity = 103/162 (63.58%), Postives = 125/162 (77.16%), Query Frame = -3 Query: 219 EECLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKMERPADEPIPEA 701 + CLTNF G+DFT+DKLRSLVRKW TLIEA V VKTTD+Y LR+F I FTKR PNQ+K+T YAQ+SQIR IR+KM EI+ +A + L L K I E+IGREIEKAT IYPLQNV IRKVK+LK+PKFDLG L+ +HG+ S +D G K+ER E + E+ Sbjct: 94 KNCLTNFHGLDFTSDKLRSLVRKWQTLIEANVTVKTTDDYLLRLFAIAFTKRRPNQIKKTTYAQSSQIRAIRKKMVEIIQREAGTRSLAQLT-KLIPEVIGREIEKATHGIYPLQNVHIRKVKLLKSPKFDLGALLALHGESSTDDKGQKVEREFKETVLES 254 HSP 2 Score: 26.5646 bits (57), Expect = 3.700e-51 Identity = 9/15 (60.00%), Postives = 14/15 (93.33%), Query Frame = -1 Query: 695 YRKIRLRAEDVQGKN 739 +RK++LR ++VQGKN Sbjct: 81 FRKVKLRVDEVQGKN 95
BLAST of CX296740 vs. ExPASy Swiss-Prot
Match: RS3A_PARBA (40S ribosomal protein S1 OS=Paracoccidioides brasiliensis (strain ATCC MYA-826 / Pb01) GN=RPS1 PE=3 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 3.700e-51 Identity = 103/162 (63.58%), Postives = 125/162 (77.16%), Query Frame = -3 Query: 219 EECLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKMERPADEPIPEA 701 + CLTNF G+DFT+DKLRSLVRKW TLIEA V VKTTD+Y LR+F I FTKR PNQ+K+T YAQ+SQIR IR+KM EI+ +A + L L K I E+IGREIEKAT IYPLQNV IRKVK+LK+PKFDLG L+ +HG+ S +D G K+ER E + E+ Sbjct: 94 KNCLTNFHGLDFTSDKLRSLVRKWQTLIEANVTVKTTDDYLLRLFAIAFTKRRPNQIKKTTYAQSSQIRAIRKKMVEIIQREAGTRSLAQLT-KLIPEVIGREIEKATHGIYPLQNVHIRKVKLLKSPKFDLGALLALHGESSTDDKGQKVEREFKETVLES 254 HSP 2 Score: 26.5646 bits (57), Expect = 3.700e-51 Identity = 9/15 (60.00%), Postives = 14/15 (93.33%), Query Frame = -1 Query: 695 YRKIRLRAEDVQGKN 739 +RK++LR ++VQGKN Sbjct: 81 FRKVKLRVDEVQGKN 95
BLAST of CX296740 vs. ExPASy Swiss-Prot
Match: RS3A_CRYNE (40S ribosomal protein S1 OS=Cryptococcus neoformans GN=RPS1 PE=3 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 4.821e-51 Identity = 96/161 (59.63%), Postives = 123/161 (76.40%), Query Frame = -3 Query: 222 EECLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSE-DVGVKMERPADEPIPE 701 + CLT+F+GMDFTTDKLRS+VRKW +L+EA+VDVKTTD Y LR+F IGFTKR NQVK+T YAQ+SQ+++IR KM EIM +A DLK LV+KF+ E IGREIEKA IYPL NV++RK KI+K PK D+ KL+E HG+ + + G K+ + + PE Sbjct: 94 KSCLTSFYGMDFTTDKLRSIVRKWQSLVEAHVDVKTTDGYVLRLFAIGFTKRQSNQVKKTTYAQSSQLKEIRAKMVEIMRREAEGSDLKELVQKFVPESIGREIEKAAKGIYPLHNVYVRKAKIVKTPKIDMSKLLESHGEAMDANTGSKVVKSGEFVEPE 254 HSP 2 Score: 25.409 bits (54), Expect = 4.821e-51 Identity = 10/15 (66.67%), Postives = 13/15 (86.67%), Query Frame = -1 Query: 695 YRKIRLRAEDVQGKN 739 +RKI+LR EDV GK+ Sbjct: 81 FRKIKLRVEDVAGKS 95
BLAST of CX296740 vs. ExPASy Swiss-Prot
Match: RS3A_AJEDS (40S ribosomal protein S1 OS=Ajellomyces dermatitidis (strain SLH14081) GN=RPS1 PE=3 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.815e-50 Identity = 101/162 (62.35%), Postives = 126/162 (77.78%), Query Frame = -3 Query: 219 EECLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKMERPADEPIPEA 701 + CLTNF G+DFT+DKLRSLVRKW TLIEA V VKTTD+Y LR+F I FTKR PNQ+K+T YA++SQIR IR+K+ EI+ +A++ L L K I E+IGREIEKAT IYPLQNV IRKVK+LK+PKFDLG L+ +HG+ S +D G K+ER E + E+ Sbjct: 94 KNCLTNFHGLDFTSDKLRSLVRKWQTLIEANVTVKTTDDYLLRLFAIAFTKRRPNQIKKTTYARSSQIRAIRKKITEIIQREASTRTLAQLT-KLIPEVIGREIEKATHGIYPLQNVHIRKVKLLKSPKFDLGALLALHGESSTDDKGQKVEREFKEQVLES 254 HSP 2 Score: 26.5646 bits (57), Expect = 1.815e-50 Identity = 9/15 (60.00%), Postives = 14/15 (93.33%), Query Frame = -1 Query: 695 YRKIRLRAEDVQGKN 739 +RK++LR ++VQGKN Sbjct: 81 FRKVKLRVDEVQGKN 95
BLAST of CX296740 vs. ExPASy Swiss-Prot
Match: RS3A_AJEDR (40S ribosomal protein S1 OS=Ajellomyces dermatitidis (strain ER-3) GN=RPS1 PE=3 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.815e-50 Identity = 101/162 (62.35%), Postives = 126/162 (77.78%), Query Frame = -3 Query: 219 EECLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKMERPADEPIPEA 701 + CLTNF G+DFT+DKLRSLVRKW TLIEA V VKTTD+Y LR+F I FTKR PNQ+K+T YA++SQIR IR+K+ EI+ +A++ L L K I E+IGREIEKAT IYPLQNV IRKVK+LK+PKFDLG L+ +HG+ S +D G K+ER E + E+ Sbjct: 94 KNCLTNFHGLDFTSDKLRSLVRKWQTLIEANVTVKTTDDYLLRLFAIAFTKRRPNQIKKTTYARSSQIRAIRKKITEIIQREASTRTLAQLT-KLIPEVIGREIEKATHGIYPLQNVHIRKVKLLKSPKFDLGALLALHGESSTDDKGQKVEREFKEQVLES 254 HSP 2 Score: 26.5646 bits (57), Expect = 1.815e-50 Identity = 9/15 (60.00%), Postives = 14/15 (93.33%), Query Frame = -1 Query: 695 YRKIRLRAEDVQGKN 739 +RK++LR ++VQGKN Sbjct: 81 FRKVKLRVDEVQGKN 95
BLAST of CX296740 vs. ExPASy Swiss-Prot
Match: RS3A_AJECN (40S ribosomal protein S1 OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=RPS1 PE=3 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.815e-50 Identity = 101/162 (62.35%), Postives = 126/162 (77.78%), Query Frame = -3 Query: 219 EECLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKMERPADEPIPEA 701 + CLTNF G+DFT+DKLRSLVRKW TLIEA V VKTTD+Y LR+F I FTKR PNQ+K+T YA++SQIR IR+K+ EI+ +A+S L L K I E+IGREIEK+T IYPLQNV IRKVK+LK+PKFDLG L+ +HG+ S +D G K+ER E + E+ Sbjct: 94 KNCLTNFHGLDFTSDKLRSLVRKWQTLIEANVTVKTTDDYLLRLFAIAFTKRRPNQIKKTTYARSSQIRAIRKKITEIIQREASSRTLAQLT-KLIPEVIGREIEKSTHGIYPLQNVHIRKVKLLKSPKFDLGALLALHGESSTDDKGQKVEREFKEQVLES 254 HSP 2 Score: 26.5646 bits (57), Expect = 1.815e-50 Identity = 9/15 (60.00%), Postives = 14/15 (93.33%), Query Frame = -1 Query: 695 YRKIRLRAEDVQGKN 739 +RK++LR ++VQGKN Sbjct: 81 FRKVKLRVDEVQGKN 95
BLAST of CX296740 vs. ExPASy Swiss-Prot
Match: RS3A_AJECG (40S ribosomal protein S1 OS=Ajellomyces capsulata (strain ATCC 26029 / G186AR / H82 / RMSCC 2432) GN=RPS1 PE=3 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 4.019e-50 Identity = 100/162 (61.73%), Postives = 126/162 (77.78%), Query Frame = -3 Query: 219 EECLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKMERPADEPIPEA 701 + CLTNF G+DFT+DKLRSLVRKW TLIEA V VKTTD+Y LR+F I FTKR PNQ+K+T YA++SQIR IR+K+ EI+ +A++ L L K I E+IGREIEK+T IYPLQNV IRKVK+LK+PKFDLG L+ +HG+ S +D G K+ER E + E+ Sbjct: 94 KNCLTNFHGLDFTSDKLRSLVRKWQTLIEANVTVKTTDDYLLRLFAIAFTKRRPNQIKKTTYARSSQIRAIRKKITEIIQREASTRTLAQLT-KLIPEVIGREIEKSTHGIYPLQNVHIRKVKLLKSPKFDLGALLALHGESSTDDKGQKVEREFKEQVLES 254 HSP 2 Score: 26.5646 bits (57), Expect = 4.019e-50 Identity = 9/15 (60.00%), Postives = 14/15 (93.33%), Query Frame = -1 Query: 695 YRKIRLRAEDVQGKN 739 +RK++LR ++VQGKN Sbjct: 81 FRKVKLRVDEVQGKN 95
BLAST of CX296740 vs. ExPASy Swiss-Prot
Match: RS3A_AJECH (40S ribosomal protein S1 OS=Ajellomyces capsulata (strain H143) GN=RPS1 PE=3 SV=2) HSP 1 Score: 190.274 bits (482), Expect = 8.900e-50 Identity = 99/162 (61.11%), Postives = 126/162 (77.78%), Query Frame = -3 Query: 219 EECLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKMERPADEPIPEA 701 + CLTNF G+DFT+DKLRSLVRKW TLIEA V VKTTD+Y LR+F I FTKR PNQ+K+T YA++SQIR IR+K+ EI+ +A++ L L K I E+IGREI+K+T IYPLQNV IRKVK+LK+PKFDLG L+ +HG+ S +D G K+ER E + E+ Sbjct: 94 KNCLTNFHGLDFTSDKLRSLVRKWQTLIEANVTVKTTDDYLLRLFAIAFTKRRPNQIKKTTYARSSQIRAIRKKITEIIQREASTRTLAQLT-KLIPEVIGREIDKSTHGIYPLQNVHIRKVKLLKSPKFDLGALLALHGESSTDDKGQKVEREFKEQVLES 254 HSP 2 Score: 26.5646 bits (57), Expect = 8.900e-50 Identity = 9/15 (60.00%), Postives = 14/15 (93.33%), Query Frame = -1 Query: 695 YRKIRLRAEDVQGKN 739 +RK++LR ++VQGKN Sbjct: 81 FRKVKLRVDEVQGKN 95
BLAST of CX296740 vs. ExPASy Swiss-Prot
Match: RS3A_IXOSC (40S ribosomal protein S3a OS=Ixodes scapularis PE=2 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 1.159e-49 Identity = 93/163 (57.06%), Postives = 121/163 (74.23%), Query Frame = -3 Query: 243 LTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSE-------------DVGVKMERP 692 LTNF GMD TTDKLRS+V+KW TLIEA VDV+TTD Y LRMFCIGFTK+ NQ+K+TCYAQ +Q+R IR+KM E+M+ + +S +LK +V K I IG++IEK+ IYPL +V IRKVK+LK PKF+LGKL+E+HG+ + + GVK++RP Sbjct: 97 LTNFHGMDLTTDKLRSMVKKWQTLIEATVDVRTTDGYLLRMFCIGFTKKCANQLKKTCYAQHNQVRLIRKKMTEMMVVEVSSSNLKDVVNKLIPGSIGKDIEKSCQHIYPLHDVLIRKVKVLKKPKFELGKLLELHGEGTSKGGAASTAAVAKGEEGVKVDRP 259 HSP 2 Score: 28.1054 bits (61), Expect = 1.159e-49 Identity = 12/16 (75.00%), Postives = 14/16 (87.50%), Query Frame = -1 Query: 692 YRKIRLRAEDVQGKNV 739 YRK RL AE+VQG+NV Sbjct: 81 YRKFRLIAEEVQGRNV 96
BLAST of CX296740 vs. ExPASy Swiss-Prot
Match: RS3A_MALGO (40S ribosomal protein S1 OS=Malassezia globosa (strain ATCC 96807 / CBS 7966) GN=RPS1 PE=3 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 1.790e-49 Identity = 100/183 (54.64%), Postives = 134/183 (73.22%), Query Frame = -3 Query: 219 KKSMLQEDQTKS*RCPREECLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS----EDVGVKMER-PADEPIPEA 752 +K L+ D+ + CLTNF+GM FT+DKLRSLVRKW +LIEA+ D++TTD Y LR+F IGFT+R NQVK+T YA++SQI IR+KM E++ +++SCDL+ V K I E++GREIEK+T IYPL++VFI KVK+LK PKFD+ KL E+HG S EDVG K++ EP+P+A Sbjct: 81 RKFQLRVDEVQG-----RNCLTNFYGMSFTSDKLRSLVRKWQSLIEAHQDIRTTDGYLLRVFAIGFTRRRANQVKKTTYAKSSQIHAIRKKMFEVIQRESSSCDLREFVAKLIPEVMGREIEKSTQGIYPLKDVFIHKVKVLKRPKFDVNKLYELHGGASVVGAEDVGTKIKSGEFKEPVPQA 258 The following BLAST results are available for this feature:
BLAST of CX296740 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 166
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296740 ID=CX296740; Name=CX296740; organism=Citrus clementina; type=EST; length=757bpback to top |