CX296740
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296740 vs. ExPASy Swiss-Prot
Match: RS3A_COCP7 (40S ribosomal protein S1 OS=Coccidioides posadasii (strain C735) GN=RPS1 PE=3 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 1.852e-46 Identity = 106/183 (57.92%), Postives = 130/183 (71.04%), Query Frame = -3 Query: 219 LQEDQTKS*RCPR--------EECLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKMERPADEPIPEA 740 LQ DQ S R + + CLTNF GMDFT+DKLRSLVRKW +LIEA V VKTTD+Y +R+F I FTKR QVK+T YA++SQIR IR+KM EI+ +A+S L L K + E+IGREIEKAT IYPLQNV IRKVK+LK PKFDLG L+ +HG+ S +D G K+ER E + E+ Sbjct: 73 LQNDQAHSFRKIKLRVDEVQGKNCLTNFHGMDFTSDKLRSLVRKWQSLIEANVTVKTTDDYLVRLFAIAFTKRRSFQVKKTTYARSSQIRAIRKKMVEIIQREASSRTLTQLT-KLVPEVIGREIEKATRGIYPLQNVHIRKVKLLKQPKFDLGGLLALHGEASTDDKGQKVEREFTEQVLES 254
BLAST of CX296740 vs. ExPASy Swiss-Prot
Match: RS3A_COCIM (40S ribosomal protein S1 OS=Coccidioides immitis GN=RPS1 PE=3 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 1.852e-46 Identity = 106/183 (57.92%), Postives = 130/183 (71.04%), Query Frame = -3 Query: 219 LQEDQTKS*RCPR--------EECLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKMERPADEPIPEA 740 LQ DQ S R + + CLTNF GMDFT+DKLRSLVRKW +LIEA V VKTTD+Y +R+F I FTKR QVK+T YA++SQIR IR+KM EI+ +A+S L L K + E+IGREIEKAT IYPLQNV IRKVK+LK PKFDLG L+ +HG+ S +D G K+ER E + E+ Sbjct: 73 LQNDQAHSFRKIKLRVDEVQGKNCLTNFHGMDFTSDKLRSLVRKWQSLIEANVTVKTTDDYLVRLFAIAFTKRRSFQVKKTTYARSSQIRAIRKKMVEIIQREASSRTLTQLT-KLVPEVIGREIEKATRGIYPLQNVHIRKVKLLKQPKFDLGGLLALHGEASTDDKGQKVEREFTEQVLES 254
BLAST of CX296740 vs. ExPASy Swiss-Prot
Match: RS3A_UNCRE (40S ribosomal protein S1 OS=Uncinocarpus reesii (strain UAMH 1704) GN=RPS1 PE=3 SV=2) HSP 1 Score: 184.496 bits (467), Expect = 5.390e-46 Identity = 104/183 (56.83%), Postives = 130/183 (71.04%), Query Frame = -3 Query: 219 LQEDQTKS*RCPR--------EECLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKMERPADEPIPEA 740 LQ DQ S R + + CLTNF GMDFT+DKLRSLVRKW +LIEA V VKTTD+Y +R+F I FTKR QVK+T YA++SQIR IR+KM EI+ +A++ L L K + E+IGREIEKAT IYPLQNV IRKVK+LK PKFD+G L+ +HG+ S +D G K+ER E + E+ Sbjct: 73 LQNDQAHSFRKIKLRVDEVQGKNCLTNFHGMDFTSDKLRSLVRKWQSLIEANVTVKTTDDYLVRLFAIAFTKRRSFQVKKTTYARSSQIRAIRKKMVEIIQREASTRTLTQLT-KLVPEVIGREIEKATRGIYPLQNVHIRKVKLLKQPKFDIGALLALHGESSTDDKGQKVEREFKEQVLES 254
BLAST of CX296740 vs. ExPASy Swiss-Prot
Match: RS3A_ZYGRC (40S ribosomal protein S1 OS=Zygosaccharomyces rouxii (strain ATCC 2623 / CBS 732 / IFO 1130 / NBRC 1623 / NCYC 568) GN=RPS1 PE=3 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 5.578e-46 Identity = 86/153 (56.21%), Postives = 109/153 (71.24%), Query Frame = -3 Query: 234 LTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKMERPADE 692 LTN GMDFTTDK RS+VRKW TLIEA V VKT+D Y +R+F I FT++ PNQVK+TCYAQ+S IR IR+ EI+ + + L K I E+I +E+E AT I+PLQNV +RKVK+LK PKFDLG LM +HG+ S++ G K+ DE Sbjct: 97 LTNIHGMDFTTDKYRSMVRKWQTLIEAQVTVKTSDEYVIRVFAIAFTRKQPNQVKKTCYAQSSHIRAIRKVFSEILTREVQNSTLAQFTSKLIPEVINKEMENATKDIFPLQNVHVRKVKLLKQPKFDLGSLMALHGEGSDETGKKVSGFKDE 249 HSP 2 Score: 27.335 bits (59), Expect = 5.578e-46 Identity = 10/16 (62.50%), Postives = 15/16 (93.75%), Query Frame = -1 Query: 692 YRKIRLRAEDVQGKNV 739 +RKI+LR ++VQGKN+ Sbjct: 81 FRKIKLRVDEVQGKNL 96
BLAST of CX296740 vs. ExPASy Swiss-Prot
Match: RS3A_KLULA (40S ribosomal protein S1 OS=Kluyveromyces lactis GN=RPS1 PE=3 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 7.270e-46 Identity = 92/154 (59.74%), Postives = 113/154 (73.38%), Query Frame = -3 Query: 234 LTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKMERPADE 692 LTNF GMDFTTDKLRS+VRKW TLIEA V VKT+D+Y LR+F I FT++ NQVKRT YAQ+S IRQIR+ + EI+ + + L L K I E+I +EIE AT I+PLQNV IRKVK+LK PKFDLG L+ +HG+ S E+ G K+ DE Sbjct: 97 LTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSDDYVLRIFAIAFTRKQANQVKRTSYAQSSHIRQIRKVISEILTREVQNSTLAQLTSKLIPEVINKEIENATKDIFPLQNVHIRKVKLLKQPKFDLGSLLSLHGEASAEEKGKKVAGFKDE 250 HSP 2 Score: 26.9498 bits (58), Expect = 7.270e-46 Identity = 9/16 (56.25%), Postives = 15/16 (93.75%), Query Frame = -1 Query: 692 YRKIRLRAEDVQGKNV 739 +RK++LR ++VQGKN+ Sbjct: 81 FRKVKLRVDEVQGKNL 96
BLAST of CX296740 vs. ExPASy Swiss-Prot
Match: RS3A_TRIIF (40S ribosomal protein S3a OS=Triatoma infestans PE=2 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 9.470e-46 Identity = 88/162 (54.32%), Postives = 120/162 (74.07%), Query Frame = -3 Query: 219 LTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD--YSEDVGVKMERPA--DEPIPEA 692 LTNF GMD TTDKLRS+V+KW TLIEA VDV+TTD Y LR+FCIGFT + ++TCYAQ +Q+RQIRRKM + + + ++ DL+ +V K I + I ++IEKA IYPL +V+IRKVK+LK P+F+L KL+E+HGD S++ G K+ RP + P+ E+ Sbjct: 100 LTNFHGMDLTTDKLRSMVKKWQTLIEANVDVRTTDGYLLRVFCIGFTNKDQLSQRKTCYAQHTQVRQIRRKMVDNITSSISNSDLRVVVNKLIPDSIAKDIEKACQGIYPLHDVYIRKVKVLKKPRFELSKLLELHGDGKGSDEPGAKVSRPEAYEPPVQES 261 HSP 2 Score: 27.335 bits (59), Expect = 9.470e-46 Identity = 12/16 (75.00%), Postives = 13/16 (81.25%), Query Frame = -1 Query: 692 YRKIRLRAEDVQGKNV 739 YRK RL AEDVQ +NV Sbjct: 84 YRKFRLIAEDVQARNV 99
BLAST of CX296740 vs. ExPASy Swiss-Prot
Match: RS3A_LODEL (40S ribosomal protein S1 OS=Lodderomyces elongisporus GN=RPS1 PE=3 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 1.201e-45 Identity = 92/167 (55.09%), Postives = 123/167 (73.65%), Query Frame = -3 Query: 252 KKSMLQEDQTKS*RCPREECLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKM 752 +K L+ D+ + + LTNF GMDFT+DKLRSLVRKW +L+EA V VKT D+Y LR+F I FTKR NQVK+T YAQ+S++R++R+KM EI+ + ++ L L K I E+I REIEK+T +I+PLQNV IRKVK+LK PKFDLG L+ +HG+ SE+ G K+ Sbjct: 69 RKVKLRADEVQG-----NKILTNFHGMDFTSDKLRSLVRKWQSLVEANVTVKTADDYVLRVFAIAFTKRQANQVKKTTYAQSSKLREVRKKMVEILTREVSNSTLSQLTSKLIPEVISREIEKSTQTIFPLQNVHIRKVKLLKQPKFDLGSLLALHGEASEEKGKKV 230
BLAST of CX296740 vs. ExPASy Swiss-Prot
Match: RS3A_CRYHO (40S ribosomal protein S3a OS=Cryptosporidium hominis GN=Chro.40360 PE=3 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 1.234e-45 Identity = 91/150 (60.67%), Postives = 113/150 (75.33%), Query Frame = -3 Query: 252 CLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVH--GDYSEDVGVKM 695 CLT F GMD T DKL SL+RK+ TLIEA+ +VKT+D Y LR+FCI FT+R+ +QVK TCYAQ SQIRQIR+KM EI+ A+A L+ LV+KFI E IG+EIEKA I+PLQ+VFIRKVK+L P FD+ +LME H D E+ G K+ Sbjct: 96 CLTEFHGMDMTRDKLCSLIRKYQTLIEAHCNVKTSDGYVLRLFCIAFTRRMADQVKSTCYAQTSQIRQIRKKMVEIITAEAEGTTLRDLVKKFIPESIGKEIEKACRHIFPLQHVFIRKVKVLSKPSFDVSRLMESHVGADGVEEKGTKV 245 HSP 2 Score: 24.2534 bits (51), Expect = 1.234e-45 Identity = 8/14 (57.14%), Postives = 13/14 (92.86%), Query Frame = -1 Query: 698 YRKIRLRAEDVQGK 739 +RKI+L+ ED+QG+ Sbjct: 81 FRKIKLQCEDIQGR 94
BLAST of CX296740 vs. ExPASy Swiss-Prot
Match: RS3A1_PICST (40S ribosomal protein S1-A OS=Pichia stipitis GN=RPS1A PE=3 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 2.733e-45 Identity = 84/138 (60.87%), Postives = 109/138 (78.99%), Query Frame = -3 Query: 279 LTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 692 LTNF G+ FT+DKLRSLVRKW +L+EA V VKT D+Y LR+F + FTKR NQVK+T YAQ+S++R++R+KM EIM + ++ L L K I E+IGREIEK+T +I+PLQNV IRKVK+LK PKFDLG L+ +HG+ Sbjct: 97 LTNFHGLSFTSDKLRSLVRKWQSLVEANVTVKTADDYVLRVFALAFTKRQANQVKKTTYAQSSKLREVRKKMSEIMQREVSAVTLAQLTSKLIPEVIGREIEKSTQTIFPLQNVHIRKVKVLKQPKFDLGALLALHGE 234 HSP 2 Score: 26.5646 bits (57), Expect = 2.733e-45 Identity = 9/16 (56.25%), Postives = 14/16 (87.50%), Query Frame = -1 Query: 692 YRKIRLRAEDVQGKNV 739 YR ++LR ++VQGKN+ Sbjct: 81 YRNVKLRVDEVQGKNL 96
BLAST of CX296740 vs. ExPASy Swiss-Prot
Match: RS3A_ARTSF (40S ribosomal protein S3a OS=Artemia sanfranciscana PE=2 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 3.559e-45 Identity = 91/168 (54.17%), Postives = 120/168 (71.43%), Query Frame = -3 Query: 219 LTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIRQIRRKMREIMIAQAASCDLKGLVEKFIAEIIGREIEKATLSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD--------YSEDVGVKMERPA--DEPIPEA 692 LTNF GMDFTTDKLRSLV+KW TLIE VDVKTTD+Y LR+FCIGFT++ ++TCYAQ +Q+R IR+KM EI+ + +S DLK V K I + I ++IEK+ SIYP+ V+IRKVK+LK PKFD+GKL+++HG+ + GV + RP + PI E+ Sbjct: 100 LTNFHGMDFTTDKLRSLVKKWQTLIECSVDVKTTDSYLLRVFCIGFTQKDQRSQRKTCYAQHTQVRAIRKKMTEIITKEISSGDLKEAVSKLIPDSIAKDIEKSCHSIYPIHEVYIRKVKVLKKPKFDMGKLLDMHGEGAVTKRVTTEDGTGVVISRPEGYEPPIQES 267 HSP 2 Score: 22.7126 bits (47), Expect = 3.559e-45 Identity = 9/14 (64.29%), Postives = 12/14 (85.71%), Query Frame = -1 Query: 698 YRKIRLRAEDVQGK 739 +RK RL AE+VQG+ Sbjct: 84 FRKFRLIAEEVQGR 97 The following BLAST results are available for this feature:
BLAST of CX296740 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 166
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296740 ID=CX296740; Name=CX296740; organism=Citrus clementina; type=EST; length=757bpback to top |