CX296750

Overview
NameCX296750
Unique NameCX296750
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length582
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig4958 contig Ccv1_Contig4958:410..991. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HSP7C_HUMAN (Heat shock cognate 71 kDa protein OS=Homo sapiens GN=HSPA8 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 3.404e-19
Identity = 61/181 (33.70%), Postives = 98/181 (54.14%), Query Frame = 3
Query:   45 IFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGEDLLQNM 581
            +F+ KRLIGR   D VV +  K  PF+V  V+   RP +        +S  PEEV ++ L +++ +AE  L + + N V+T+P  F+  Q    + A  +AGL+VLR++ EPTA A+ Y              G+E+  +IF++G G  DV++     G+ ++K+ +G   +GGED    M
Sbjct:   67 VFDAKRLIGRRFDDAVVQSDMKHWPFMV--VNDAGRPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKV--------GAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRM 237          
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HSP7C_HORSE (Heat shock cognate 71 kDa protein OS=Equus caballus GN=HSPA8 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 3.404e-19
Identity = 61/181 (33.70%), Postives = 98/181 (54.14%), Query Frame = 3
Query:   45 IFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGEDLLQNM 581
            +F+ KRLIGR   D VV +  K  PF+V  V+   RP +        +S  PEEV ++ L +++ +AE  L + + N V+T+P  F+  Q    + A  +AGL+VLR++ EPTA A+ Y              G+E+  +IF++G G  DV++     G+ ++K+ +G   +GGED    M
Sbjct:   67 VFDAKRLIGRRFDDAVVQSDMKHWPFMV--VNDAGRPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKV--------GAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRM 237          
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HSP7C_BOVIN (Heat shock cognate 71 kDa protein OS=Bos taurus GN=HSPA8 PE=1 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 3.404e-19
Identity = 61/181 (33.70%), Postives = 98/181 (54.14%), Query Frame = 3
Query:   45 IFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGEDLLQNM 581
            +F+ KRLIGR   D VV +  K  PF+V  V+   RP +        +S  PEEV ++ L +++ +AE  L + + N V+T+P  F+  Q    + A  +AGL+VLR++ EPTA A+ Y              G+E+  +IF++G G  DV++     G+ ++K+ +G   +GGED    M
Sbjct:   67 VFDAKRLIGRRFDDAVVQSDMKHWPFMV--VNDAGRPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKV--------GAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRM 237          
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HSP70_AJECA (Heat shock 70 kDa protein OS=Ajellomyces capsulata GN=HSP70 PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 3.404e-19
Identity = 60/176 (34.09%), Postives = 94/176 (53.41%), Query Frame = 3
Query:   45 IFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGED 566
            +F+ KRLIGR   DP V A  K  PF +   D G +P I        +  TPEE+ ++ L ++R  AE  L   + N V+T+P  F+  Q    + A  +AGL+VLR++ EPTA A+ Y          +  +  E+  +IF++G G  DV++     G+ ++K+ +G   +GGED
Sbjct:   65 VFDAKRLIGRKFADPEVQADMKHFPFKI--TDKGGKPVIQVEFKGETKEFTPEEISSMVLTKMRETAEAYLGGTVNNAVVTVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGL--------DKKADGERNVLIFDLGGGTFDVSLLTIEEGIFEVKSTAGDTHLGGED 230          
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HSP7C_CRIGR (Heat shock cognate 71 kDa protein OS=Cricetulus griseus GN=HSPA8 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 4.446e-19
Identity = 61/181 (33.70%), Postives = 98/181 (54.14%), Query Frame = 3
Query:   45 IFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGEDLLQNM 581
            +F+ KRLIGR   D VV +  K  PF+V  V+   RP +        +S  PEEV ++ L +++ +AE  L + + N V+T+P  F+  Q    + A  +AGL+VLR++ EPTA A+ Y              G+E+  +IF++G G  DV++     G+ ++K+ +G   +GGED    M
Sbjct:   67 VFDAKRLIGRRFDDAVVQSDMKHWPFMV--VNDAGRPKVQVEYKGEAKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKV--------GAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRM 237          
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HSP75_KLUDE (Heat shock protein SSB OS=Kluyveromyces delphensis GN=SSB PE=3 SV=3)

HSP 1 Score: 94.3597 bits (233), Expect = 4.446e-19
Identity = 61/184 (33.15%), Postives = 104/184 (56.52%), Query Frame = 3
Query:   45 IFNMKRLIGR-VDTDPVVHASKSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSG---SEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGEDLLQNM 581
            +F+ KRLIGR  D + V +  K+ PF V  VD+   P I        +  +P+E+ ++ L +++ +AE ++ + +   V+T+P  F+  Q    + A A++GL+VLR++ EPTA A+ Y           LG+G    E+  +IF++G G  DV++   AGGV  +K+ SG+  +GG+D   N+
Sbjct:   69 VFDAKRLIGRRFDEESVQNDMKTWPFKV--VDVEGAPVIEVEYLGETKQFSPQEISSMVLTKMKEIAEAKIGKKVEKAVITVPAYFNDAQRQATKDAGAISGLNVLRIINEPTAAAIAY----------GLGAGKSDKERHVLIFDLGGGTFDVSLLHIAGGVYTVKSTSGNTHLGGQDFDTNL 240          
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HSP74_YEAST (Heat shock protein SSA4 OS=Saccharomyces cerevisiae GN=SSA4 PE=1 SV=3)

HSP 1 Score: 94.3597 bits (233), Expect = 4.446e-19
Identity = 59/176 (33.52%), Postives = 97/176 (55.11%), Query Frame = 3
Query:   45 IFNMKRLIGRVDTDP-VVHASKSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGED 566
            +F+ KRLIGR   DP V + +K  PF V  +D G +P +        ++ TPEE+ ++ L +++  AE  L   +++ V+T+P  F+  Q    + A  +AGL+VLR++ EPTA A+ Y          N+        +IF++G G  DV++ +   GV ++KA +G   +GGED
Sbjct:   65 VFDAKRLIGRKFDDPEVTNDAKHYPFKV--IDKGGKPVVQVEYKGETKTFTPEEISSMILTKMKETAENFLGTEVKDAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKSQKEHNV--------LIFDLGGGTFDVSLLSIDEGVFEVKATAGDTHLGGED 230          
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HSP70_LEIAM (Heat shock 70 kDa protein OS=Leishmania amazonensis GN=HSP70 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 4.446e-19
Identity = 59/176 (33.52%), Postives = 97/176 (55.11%), Query Frame = 3
Query:   45 IFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGED 566
            +F+ KRLIGR   D VV +  K  PF V T     +P I+       ++ TPE++ ++ L++++  AE  L + ++  V+T+P  F+  Q    + A  ++GL VLR++ EPTA A+ Y         +    G E+  +IF++G G  DVT+    GG+ ++KA +G   +GGED
Sbjct:   67 VFDAKRLIGRKFNDLVVQSDMKHWPFKVTTKGDD-KPVISVQYRGEEKTFTPEKISSMVLLKMKETAEAYLGKQVKKAVVTVPAYFNDSQRQATKDAGTISGLEVLRIINEPTAAAIAYGL-------DKGDDGKERNVLIFDLGGGTFDVTLLTIDGGIFEVKATNGDTHLGGED 234          
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HSP70_ACHKL (Heat shock 70 kDa protein OS=Achlya klebsiana GN=HSP70 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 4.446e-19
Identity = 59/176 (33.52%), Postives = 94/176 (53.41%), Query Frame = 3
Query:   45 IFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGED 566
            +F+ KRLIGR   DP   A  K  PF V T   G +P I        ++  PEE+ ++ L++++ +AE  +   + N V+T+P  F+  Q    + A A+AGL+VLR++ EPT  A+ Y              G E+  +IF++G G  DV++     G+ ++KA +G   +GGED
Sbjct:   69 VFDAKRLIGRKFNDPATQADIKHWPFKV-TPGAGDKPQITVEFKGETKTFQPEEISSMVLIKMKEVAEAFIGTAVNNAVITVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTRAAIAYGLDK---------KGGERNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGED 234          
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: GRP78_PICAN (78 kDa glucose-regulated protein homolog OS=Pichia angusta GN=BiP PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 4.446e-19
Identity = 60/176 (34.09%), Postives = 97/176 (55.11%), Query Frame = 3
Query:   45 IFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGED 566
            IF++KRLIG    D V+    K LP+ V+  D   RP + A VN   ++ T EE+ A+ L +++ +AE  L + + + V+T+P  F+  Q    + A  +AGL VLR++ EPTA A+ Y             +  EK  +++++G G  DV++   AGG  ++ A +G   +GGED
Sbjct:  103 IFDIKRLIGHRFDDKVIQKEIKHLPYKVKDQD--GRPVVEAKVNGELKTFTAEEISAMILGKMKQIAEDYLGKKVTHAVVTVPAYFNDAQRQATKDAGTIAGLEVLRIVNEPTAAAIAYGLDK---------TDEEKHIIVYDLGGGTFDVSLLTIAGGAFEVLATAGDTHLGGED 267          
The following BLAST results are available for this feature:
BLAST of CX296750 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP7C_HUMAN3.404e-1933.70Heat shock cognate 71 kDa protein OS=Homo sapiens ... [more]
HSP7C_HORSE3.404e-1933.70Heat shock cognate 71 kDa protein OS=Equus caballu... [more]
HSP7C_BOVIN3.404e-1933.70Heat shock cognate 71 kDa protein OS=Bos taurus GN... [more]
HSP70_AJECA3.404e-1934.09Heat shock 70 kDa protein OS=Ajellomyces capsulata... [more]
HSP7C_CRIGR4.446e-1933.70Heat shock cognate 71 kDa protein OS=Cricetulus gr... [more]
HSP75_KLUDE4.446e-1933.15Heat shock protein SSB OS=Kluyveromyces delphensis... [more]
HSP74_YEAST4.446e-1933.52Heat shock protein SSA4 OS=Saccharomyces cerevisia... [more]
HSP70_LEIAM4.446e-1933.52Heat shock 70 kDa protein OS=Leishmania amazonensi... [more]
HSP70_ACHKL4.446e-1933.52Heat shock 70 kDa protein OS=Achlya klebsiana GN=H... [more]
GRP78_PICAN4.446e-1934.0978 kDa glucose-regulated protein homolog OS=Pichia... [more]

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Properties
Property NameValue
Genbank descriptionC05802D04SK FerrChloL1 Citrus clementina cDNA clone C05802D04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296750 ID=CX296750; Name=CX296750; organism=Citrus clementina; type=EST; length=582bp
GAGGCTCACTCTCCCATGAACATGAAATGTTATCTGGAGCTGCTATTTTC
AACATGAAACGCTTAATCGGCAGAGTTGACACCGATCCTGTGGTCCATGC
AAGCAAAAGCTTACCGTTTTTGGTCCAAACCGTGGACATTGGTGTTCGTC
CATTTATTGCAGCCTTAGTGAACAATGCGTGGAGATCCACCACTCCCGAA
GAAGTCCTGGCAATATTTTTGGTGGAACTAAGAGCCATGGCTGAAACTCA
GTTGAAACGCCCAATAAGAAATGTTGTTCTAACCATTCCAGTTTCATTCA
GTCGTTTCCAACTGACACGCATTGAACGAGCATGTGCTATGGCTGGCCTT
CATGTCCTCAGACTTATGCCTGAACCAACTGCTGTAGCTCTATTGTATGC
TCAGCAGCAGCAACAGAGTGTGCATGAGAATTTGGGCAGTGGAAGTGAGA
AGATTGCGGTCATTTTCAATATGGGTGCTGGGTACTGTGATGTCACTGTG
AGTGCTACAGCTGGAGGAGTTTCACAGATTAAAGCTTTATCAGGAAGTGC
TATTGGAGGAGAGGATTTACTTCAGAATATGA
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