CX296750
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: DNAK1_PROMM (Chaperone protein dnaK1 OS=Prochlorococcus marinus (strain MIT 9313) GN=dnaK1 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.061e-12 Identity = 60/196 (30.61%), Postives = 97/196 (49.49%), Query Frame = 3 Query: 3 GSLSHEHEMLSGAAIF-NMKRLIGRVDTDPVVHASKSLPFLVQTVDIG-VRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSG-SAIGGEDLLQNM 581 G L+ +L+ F N+KR +GR D + +S S+P+ V+ + G VR ++ V R PEE++A + +L A T L P+ V+T+P F+ Q A +AG+ V R++ EPTA AL Y + + ++F++G G DV++ A GV +KA G + +GG D Q + Sbjct: 51 GQLARRQLVLNPRNTFANLKRFVGR-GWDEMDDSSLSVPYTVRANEQGNVR--VSCQVTE--REYAPEELVASIIRKLVDDAATYLGEPVEAAVVTVPAYFNDAQRQATRDAGRLAGITVERILNEPTAAALAY----------GFDRSAARRVLVFDLGGGTFDVSLMRVANGVFDVKATCGDTQLGGNDFDQRI 231
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HSP13_MOUSE (Heat shock 70 kDa protein 13 OS=Mus musculus GN=Hspa13 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.385e-12 Identity = 53/181 (29.28%), Postives = 92/181 (50.83%), Query Frame = 3 Query: 45 IFNMKRLIGRVDTDPVVHASKS-LPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSG-SAIGGEDLLQNM 581 I++ KR IG++ T + A PF V + G+ F ++ +N +PE V + L++L+ MAE L P+ N V+++P F Q +A +AGL +LR++ EPTA A+ Y + ++ ++G G DV++ GG+ +A+SG + +GG+D Q + Sbjct: 96 IYDAKRFIGKIFTPEELEAEVGRYPFKVLHRN-GMAEF--SVTSNETIIVSPEFVGSRLLLKLKEMAEEYLGMPVANAVISVPAEFDLQQRNSTIQAANLAGLKILRVINEPTAAAMAYGLHKVDVFY----------VLVIDLGGGTLDVSLLNKQGGMFLTRAMSGNNKLGGQDFNQRL 263
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HSCA_THIDA (Chaperone protein hscA homolog OS=Thiobacillus denitrificans (strain ATCC 25259) GN=hscA PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.385e-12 Identity = 57/182 (31.32%), Postives = 90/182 (49.45%), Query Frame = 3 Query: 45 IFNMKRLIGR--VDTDPVVHASKSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSG-SAIGGEDLLQNM 581 I ++KR +GR D D + SLP+ V+ AA V + P E+ A L +R AE + + V+T+P F Q + A +AGL+VLRL+ EPTA A+ Y L + SE + ++++G G D+++ A GV ++ A +G SA+GG+D Q + Sbjct: 83 IVSVKRFMGRGIADIDDIA----SLPYRFVDAPGMVQLKTAAGVKS------PVEISAEILKLMRERAEASMGGELVGAVITVPAYFDDAQRQATKDAAQLAGLNVLRLLNEPTAAAIAY----------GLDNASEGVYAVYDLGGGTFDISILRLARGVFEVLATNGDSALGGDDFDQRV 244
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HSCA_SHESH (Chaperone protein hscA homolog OS=Shewanella sediminis (strain HAW-EB3) GN=hscA PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.385e-12 Identity = 52/175 (29.71%), Postives = 86/175 (49.14%), Query Frame = 3 Query: 45 IFNMKRLIGRVDTDPVVHASKSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSG-SAIGGED 566 I ++KR +GR D + + LP+ Q + G+ F + P ++ + L L + AE+ L + +V+T+P F Q + A A+ G+ VLRL+ EPTA A+ Y L SG E + I+++G G D+++ GV ++ A G SA+GG+D Sbjct: 82 IVSVKRFMGRSLAD-IQSGIQDLPYRFQASENGLPLFATEQ-----GTVNPVQISSEILKPLISRAESTLGGDLEGIVITVPAYFDDAQRQGTKDAAALLGVKVLRLLNEPTAAAIAY----------GLDSGQEGVIAIYDLGGGTFDISILRLNKGVFEVLATGGDSALGGDD 240
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HSCA_SHEFN (Chaperone protein hscA homolog OS=Shewanella frigidimarina (strain NCIMB 400) GN=hscA PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.385e-12 Identity = 56/175 (32.00%), Postives = 84/175 (48.00%), Query Frame = 3 Query: 45 IFNMKRLIGRVDTDPVVHASKSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSG-SAIGGED 566 I ++KR +GR TD + LP+ + + G+ F + P +V A L L A AET L + VV+T+P F Q + A + G+ VLRL+ EPTA A+ Y L S E + I+++G G D++V GV ++ A G SA+GG+D Sbjct: 82 IVSVKRFMGRSLTD-IQSGVHRLPYELHASENGLPVFTTPM-----GQVNPIQVSAEILKPLIARAETTLGGELAGVVITVPAYFDDAQRQGTKDAAELLGVKVLRLLNEPTAAAIAY----------GLDSKQEGVIAIYDLGGGTFDISVLRLNRGVFEVLATGGDSALGGDD 240
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HSCA_RALEH (Chaperone protein hscA homolog OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=hscA PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.385e-12 Identity = 46/131 (35.11%), Postives = 67/131 (51.15%), Query Frame = 3 Query: 192 TPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSG-SAIGGEDLLQNM 581 +P E+ A L LR AE L + V+T+P F Q + A +AGL VLRL+ EPTA A+ Y L + SE I ++++G G D++V GV ++ A G SA+GG+D Q + Sbjct: 124 SPVEISAEILATLRQRAEDTLGDDLVGAVITVPAYFDEAQRQATKDAARLAGLEVLRLLNEPTAAAIAY----------GLDNASEGIYAVYDLGGGTFDISVLKLTQGVFEVLATGGDSALGGDDFDQRL 244
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HSCA_PSEE4 (Chaperone protein hscA homolog OS=Pseudomonas entomophila (strain L48) GN=hscA PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.385e-12 Identity = 57/176 (32.39%), Postives = 87/176 (49.43%), Query Frame = 3 Query: 42 AIFNMKRLIGRVDTDPVVHASKSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSG-SAIGGED 566 +I ++KRL+GR D V + LP+ + + PFI + +P EV A L LR AE L + V+T+P F Q + A +AGL+VLRL+ EPTA A+ Y L +E + IF++G G D+++ GV ++ A G +A+GG+D Sbjct: 81 SILSVKRLMGRGLAD-VKQLGEQLPYRFVGGESHM-PFIDTVQG----PKSPVEVSADILKVLRQRAEDTLGGELVGAVITVPAYFDDAQRQATKDAAKLAGLNVLRLLNEPTAAAVAY----------GLDQHAEGVVAIFDLGGGTFDISILRLTAGVFEVLATGGDTALGGDD 240
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HSCA_HERAR (Chaperone protein hscA homolog OS=Herminiimonas arsenicoxydans GN=hscA PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.385e-12 Identity = 45/126 (35.71%), Postives = 67/126 (53.17%), Query Frame = 3 Query: 192 TPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSG-SAIGGED 566 +P EV A L LR AE L + V+T+P F Q + A +AGL+VLRL+ EPTA A+ Y L +GSE + ++++G G DV++ GV ++ + G SA+GG+D Sbjct: 124 SPVEVSAEILATLRQQAEDALGDDLVGAVITVPAYFDDAQRQATKDAAKLAGLNVLRLLNEPTAAAIAY----------GLDNGSEGVFAVYDLGGGTFDVSILKLTKGVFEVLSTGGDSALGGDD 239
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HSCA_BURS3 (Chaperone protein hscA homolog OS=Burkholderia sp. (strain 383) GN=hscA PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.385e-12 Identity = 45/126 (35.71%), Postives = 67/126 (53.17%), Query Frame = 3 Query: 192 TPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSG-SAIGGED 566 +P EV A L LR AE L + V+T+P F Q + A +AGL+VLRL+ EPTA A+ Y L +GSE + ++++G G D+++ GV ++ A G SA+GG+D Sbjct: 124 SPVEVSAEILATLRYRAEDSLGDDLVGAVITVPAYFDEAQRQATKDAARLAGLNVLRLLNEPTAAAIAY----------GLDNGSEGLYAVYDLGGGTFDLSILKLTKGVFEVLAAGGDSALGGDD 239
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: DNAK_SALTO (Chaperone protein dnaK OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) GN=dnaK PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.385e-12 Identity = 46/127 (36.22%), Postives = 73/127 (57.48%), Query Frame = 3 Query: 192 TPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGS-EKIAVIFNMGAGYCDVTVSATAGGVSQIKALSG-SAIGGED 566 TP+E+ A L++L+ AE L I + V+T+P F+ Q + A +AG +VLR++ EPTA AL Y L GS E+ ++F++G G DV++ A GV ++K+ SG + +GG+D Sbjct: 87 TPQEISARTLMKLKRDAEAYLGEQITDAVITVPAYFNDGQRQATKEAGEIAGFNVLRIVNEPTAAALAY----------GLDKGSKEQTVLVFDLGGGTFDVSLLELAEGVIEVKSTSGDNLLGGDD 203 The following BLAST results are available for this feature:
BLAST of CX296750 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296750 ID=CX296750; Name=CX296750; organism=Citrus clementina; type=EST; length=582bpback to top |