CX296750

Overview
NameCX296750
Unique NameCX296750
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length582
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig4958 contig Ccv1_Contig4958:410..991. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HSP75_CANGA (Heat shock protein SSB OS=Candida glabrata GN=SSB1 PE=3 SV=3)

HSP 1 Score: 93.9745 bits (232), Expect = 5.807e-19
Identity = 61/184 (33.15%), Postives = 104/184 (56.52%), Query Frame = 3
Query:   45 IFNMKRLIGR-VDTDPVVHASKSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSG---SEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGEDLLQNM 581
            +F+ KRLIGR  D + V +  K+ PF V  VD+   P I        +  +P+E+ ++ L +++ +AE ++ + +   V+T+P  F+  Q    + A A++GL+VLR++ EPTA A+ Y           LG+G    E+  +IF++G G  DV++   AGGV  +K+ SG+  +GG+D   N+
Sbjct:   69 VFDAKRLIGRRFDEESVQNDMKTWPFKV--VDVDGAPVIEVEYLGENKQFSPQEISSMVLTKMKEIAEAKIGKKVEKAVITVPAYFNDAQRQATKDAGAISGLNVLRIINEPTAAAIAY----------GLGAGKSDKERHVLIFDLGGGTFDVSLLHIAGGVYTVKSTSGNTHLGGQDFDTNL 240          
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HSP71_YEAST (Heat shock protein SSA1 OS=Saccharomyces cerevisiae GN=SSA1 PE=1 SV=4)

HSP 1 Score: 93.9745 bits (232), Expect = 5.807e-19
Identity = 58/176 (32.95%), Postives = 97/176 (55.11%), Query Frame = 3
Query:   45 IFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGED 566
            +F+ KRLIGR   DP V A  K  PF  + +D+  +P I        ++ TPE++ ++ L +++  AE+ L   + + V+T+P  F+  Q    + A  +AGL+VLR++ EPTA A+ Y              G E+  +IF++G G  DV++ +   G+ ++KA +G   +GGED
Sbjct:   65 VFDAKRLIGRNFNDPEVQADMKHFPF--KLIDVDGKPQIQVEFKGETKNFTPEQISSMVLGKMKETAESYLGAKVNDAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDK---------KGKEEHVLIFDLGGGTFDVSLLSIEDGIFEVKATAGDTHLGGED 229          
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HSP7D_MANSE (Heat shock 70 kDa protein cognate 4 OS=Manduca sexta PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 7.584e-19
Identity = 62/181 (34.25%), Postives = 98/181 (54.14%), Query Frame = 3
Query:   45 IFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGEDLLQNM 581
            IF+ KRLIGR   D  V A  K  PF  + V  G +P I        ++  PEEV ++ L +++  AE  L + ++N V+T+P  F+  Q    + A  ++GL+VLR++ EPTA A+ Y         +  GSG E+  +IF++G G  DV++     G+ ++K+ +G   +GGED    M
Sbjct:   67 IFDAKRLIGRKFEDATVQADMKHWPF--EVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL-------DKKGSG-ERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRM 237          
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HSP7A_CAEEL (Heat shock 70 kDa protein A OS=Caenorhabditis elegans GN=hsp-1 PE=1 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 7.584e-19
Identity = 60/181 (33.15%), Postives = 100/181 (55.25%), Query Frame = 3
Query:   45 IFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGEDLLQNM 581
            +F+ KRLIGR   DP V +  K  PF V + + G +P +        +  TPEE+ ++ L++++  AE  L   +++ V+T+P  F+  Q    + A A+AGL+VLR++ EPTA A+ Y         +  G G E+  +IF++G G  DV++     G+ ++K+ +G   +GGED    M
Sbjct:   67 VFDAKRLIGRKFDDPAVQSDMKHWPFKVISAE-GAKPKVQVEYKGENKIFTPEEISSMVLLKMKETAEAFLGTTVKDAVVTVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAAIAYGL-------DKKGHG-ERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRM 238          
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HSP75_KLULA (Heat shock protein SSB OS=Kluyveromyces lactis GN=SSB PE=3 SV=3)

HSP 1 Score: 93.5893 bits (231), Expect = 7.584e-19
Identity = 61/184 (33.15%), Postives = 103/184 (55.98%), Query Frame = 3
Query:   45 IFNMKRLIGR-VDTDPVVHASKSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSG---SEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGEDLLQNM 581
            +F+ KRLIGR  D + V    K+ PF V  +D    P I        ++ +P+E+ ++ L +++ +AE ++ + +   V+T+P  F+  Q    + A A+AGL+VLR++ EPTA A+ Y           LG+G    E+  +IF++G G  DV++   AGGV  +K+ SG+  +GG+D   N+
Sbjct:   69 VFDAKRLIGRRFDEESVQSDMKTWPFKV--IDSNDAPLIEVEYLGETKTFSPQEISSMVLTKMKEIAEAKIGKKVEKAVVTVPAYFNDAQRQATKDAGAIAGLNVLRIINEPTAAAIAY----------GLGAGKSDKERHVLIFDLGGGTFDVSLLHIAGGVYTVKSTSGNTHLGGQDFDTNL 240          
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HSP70_ONCMY (Heat shock cognate 70 kDa protein OS=Oncorhynchus mykiss GN=hsc71 PE=2 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 7.584e-19
Identity = 58/181 (32.04%), Postives = 98/181 (54.14%), Query Frame = 3
Query:   45 IFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGEDLLQNM 581
            +F+ KRLIGR   D VV +  K  PF  + ++   RP +        +S  PEE+ ++ LV+++ +AE  L + + N V+T+P  F+  Q    + A  ++GL+VLR++ EPTA A+ Y              G+E+  +IF++G G  DV++     G+ ++K+ +G   +GGED    M
Sbjct:   67 VFDAKRLIGRRFDDGVVQSDMKHWPF--EVINDSTRPKLQVEYKGETKSFYPEEISSMVLVKMKEIAEAYLGKTVNNAVVTVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKV--------GAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRM 237          
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HSP70_LEIMA (Heat shock 70 kDa protein (Fragment) OS=Leishmania major GN=HSP70 PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 7.584e-19
Identity = 59/176 (33.52%), Postives = 96/176 (54.55%), Query Frame = 3
Query:   45 IFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGED 566
            +F+ KRLIGR   D VV +  K  PF V T     +P I+       ++ TPEE+ ++ L++++  AE  L + ++  V+T+P  F+  Q    + A  +AGL V+R++ EPTA A+ Y         +    G E+  +IF++G G  DVT+     G+ ++KA +G   +GGED
Sbjct:   67 VFDAKRLIGRKFNDSVVQSDMKHWPFKVTTKGDD-KPVISVQYRGEEKTFTPEEISSMVLLKMKETAEAYLGKQVKKAVVTVPAYFNDSQRQATKDAGTIAGLEVVRIINEPTAAAIAYGL-------DKGDDGKERNVLIFDLGGGTFDVTLLTIDRGIFEVKATNGDTHLGGED 234          
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: GRP78_SCHPO (78 kDa glucose-regulated protein homolog OS=Schizosaccharomyces pombe GN=bip1 PE=2 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 7.584e-19
Identity = 60/176 (34.09%), Postives = 97/176 (55.11%), Query Frame = 3
Query:   45 IFNMKRLIGR-VDTDPVVHASKSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGED 566
            IF++KRLIGR  D   +    KS PF +  V+   RP +   V    +  TPEE+ A+ L +++  AE  L +P+ + V+T+P  F+  Q    + A  +AGL+V+R++ EPTA A+ Y             + +EK  V++++G G  DV++ +   GV ++ A SG   +GGED
Sbjct:   98 IFDIKRLIGRKFDEKTMAKDIKSFPFHI--VNDKNRPLVEVNVGGKKKKFTPEEISAMILSKMKQTAEAYLGKPVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVIRIVNEPTAAAIAYGLDK---------TDTEKHIVVYDLGGGTFDVSLLSIDNGVFEVLATSGDTHLGGED 262          
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HSP72_PARBA (Heat shock 70 kDa protein 2 OS=Paracoccidioides brasiliensis (strain ATCC MYA-826 / Pb01) GN=HSP70-2 PE=2 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 9.904e-19
Identity = 59/176 (33.52%), Postives = 96/176 (54.55%), Query Frame = 3
Query:   45 IFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGED 566
            +F+ KRLIGR   DP V +  K  PF V  +D   +P I+       +  TPEE+ ++ L ++R  AE+ L   + N V+T+P  F+  Q    + A  +AGL+VLR++ EPTA A+ Y          +  +  E+  +IF++G G  DV++     G+ ++K+ +G   +GGED
Sbjct:   65 VFDAKRLIGRKFADPEVQSDMKHFPFKV--IDKAGKPVISVEFKGEEKQFTPEEISSMVLTKMRETAESYLGGTVNNAVVTVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGL--------DKKAEGERNVLIFDLGGGTFDVSLLTIEEGIFEVKSTAGDTHLGGED 230          
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: GRP78_APLCA (78 kDa glucose-regulated protein OS=Aplysia californica PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 9.904e-19
Identity = 63/181 (34.81%), Postives = 95/181 (52.49%), Query Frame = 3
Query:   45 IFNMKRLIGRV-DTDPVVHASKSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGEDLLQNM 581
            IF++KRLIGR  D   V H  K  PF V   +   +P I A      RS  PEE+ A+ L ++R +AE  L + I N V+T+P  F+  Q    + A  +AGL+V+R++ EPTA A+ Y                EK  ++F++G G  DV++     GV ++ + +G   +GGED  Q +
Sbjct:  102 IFDVKRLIGRTFDDKSVQHDIKFYPFKVTNANN--KPHIQAATGEGDRSFAPEEISAMVLSKMRDIAEEYLGKKITNAVVTVPAYFNDAQRQATKDAGTIAGLNVMRIINEPTAAAIAYGLDK---------KEGEKNILVFDLGGGTFDVSLLTIDNGVFEVVSTNGDTHLGGEDFDQRV 271          
The following BLAST results are available for this feature:
BLAST of CX296750 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP75_CANGA5.807e-1933.15Heat shock protein SSB OS=Candida glabrata GN=SSB1... [more]
HSP71_YEAST5.807e-1932.95Heat shock protein SSA1 OS=Saccharomyces cerevisia... [more]
HSP7D_MANSE7.584e-1934.25Heat shock 70 kDa protein cognate 4 OS=Manduca sex... [more]
HSP7A_CAEEL7.584e-1933.15Heat shock 70 kDa protein A OS=Caenorhabditis eleg... [more]
HSP75_KLULA7.584e-1933.15Heat shock protein SSB OS=Kluyveromyces lactis GN=... [more]
HSP70_ONCMY7.584e-1932.04Heat shock cognate 70 kDa protein OS=Oncorhynchus ... [more]
HSP70_LEIMA7.584e-1933.52Heat shock 70 kDa protein (Fragment) OS=Leishmania... [more]
GRP78_SCHPO7.584e-1934.0978 kDa glucose-regulated protein homolog OS=Schizo... [more]
HSP72_PARBA9.904e-1933.52Heat shock 70 kDa protein 2 OS=Paracoccidioides br... [more]
GRP78_APLCA9.904e-1934.8178 kDa glucose-regulated protein OS=Aplysia califo... [more]

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Properties
Property NameValue
Genbank descriptionC05802D04SK FerrChloL1 Citrus clementina cDNA clone C05802D04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296750 ID=CX296750; Name=CX296750; organism=Citrus clementina; type=EST; length=582bp
GAGGCTCACTCTCCCATGAACATGAAATGTTATCTGGAGCTGCTATTTTC
AACATGAAACGCTTAATCGGCAGAGTTGACACCGATCCTGTGGTCCATGC
AAGCAAAAGCTTACCGTTTTTGGTCCAAACCGTGGACATTGGTGTTCGTC
CATTTATTGCAGCCTTAGTGAACAATGCGTGGAGATCCACCACTCCCGAA
GAAGTCCTGGCAATATTTTTGGTGGAACTAAGAGCCATGGCTGAAACTCA
GTTGAAACGCCCAATAAGAAATGTTGTTCTAACCATTCCAGTTTCATTCA
GTCGTTTCCAACTGACACGCATTGAACGAGCATGTGCTATGGCTGGCCTT
CATGTCCTCAGACTTATGCCTGAACCAACTGCTGTAGCTCTATTGTATGC
TCAGCAGCAGCAACAGAGTGTGCATGAGAATTTGGGCAGTGGAAGTGAGA
AGATTGCGGTCATTTTCAATATGGGTGCTGGGTACTGTGATGTCACTGTG
AGTGCTACAGCTGGAGGAGTTTCACAGATTAAAGCTTTATCAGGAAGTGC
TATTGGAGGAGAGGATTTACTTCAGAATATGA
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