CX296750

Overview
NameCX296750
Unique NameCX296750
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length582
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig4958 contig Ccv1_Contig4958:410..991. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HSP70_MIMIV (Heat shock 70 kDa protein homolog OS=Acanthamoeba polyphaga mimivirus GN=HSP70 PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.095e-17
Identity = 57/176 (32.39%), Postives = 95/176 (53.98%), Query Frame = 3
Query:   45 IFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGED 566
            IF+ KRLIGR   D  V +  K  PF V  +++G +P+      N  +  +PE++ ++ L +++  A   + + + + V+T+P  F+  Q    + A  +AGL+VLR++ EPTA A  Y          +     E   +IF+MG G  DVT+ +   G+ Q++A SG+  +GGED
Sbjct:   67 IFDAKRLIGRDFNDQSVQSDMKYWPFKV--INVGNKPYFEVSYQNESKQYSPEQISSMILSKMKQTASAYIGKEVTDAVITVPAYFNDSQRQATKDAGRIAGLNVLRIINEPTAAAFAYGL--------DKNQDKEMNVLIFDMGGGTHDVTLLSLEDGLFQVRATSGNTKLGGED 232          
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HS7C1_DICDI (Heat shock cognate 70 kDa protein 1 OS=Dictyostelium discoideum GN=hspB PE=1 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 1.095e-17
Identity = 62/176 (35.23%), Postives = 96/176 (54.55%), Query Frame = 3
Query:   45 IFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGED 566
            +F+ KRLIGR  +D  V +  K  PF V   D G +P I        +  +PEE+ ++ L++++  AE  L + I N V+T+P  F+  Q    + A  ++ L+V R++ EPTA A+ Y         E  GSG EK  +IF++G G  DV++     GV ++KA +G   +GGED
Sbjct:   64 VFDAKRLIGRKFSDKEVQSDMKHWPFKVIPKD-GDKPHIQVEFKGETKVFSPEEISSMVLLKMKETAEAYLGKTINNAVITVPAYFNDSQRQATKDAGTISKLNVQRIINEPTAAAIAYGL-------EKKGSG-EKNILIFDLGGGTFDVSLLTIEDGVFEVKATAGDTHLGGED 230          
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: GRP78_CANGA (78 kDa glucose-regulated protein homolog OS=Candida glabrata GN=KAR2 PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.095e-17
Identity = 59/176 (33.52%), Postives = 94/176 (53.41%), Query Frame = 3
Query:   45 IFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGED 566
            IF++KRLIG    D  V    K LPF V  VD   +P +   V    R  TPEE+  + L +++ +AE  L + + + V+T+P  F+  Q    + A  +AGL+VLR++ EPTA A+ Y        H+          +++++G G  DV++ +   GV +++A SG   +GGED
Sbjct:   99 IFDIKRLIGLKFNDRSVQRDIKHLPFKV--VDKDGKPVVQVKVKGEDRVFTPEEISGMILGKMKQIAEDYLGKKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVLRIVNEPTAAAIAYGLDKSDKEHQ---------IIVYDLGGGTFDVSLLSIENGVFEVQATSGDTHLGGED 263          
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: GRP78_BOVIN (78 kDa glucose-regulated protein OS=Bos taurus GN=HSPA5 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.095e-17
Identity = 61/182 (33.52%), Postives = 95/182 (52.20%), Query Frame = 3
Query:   45 IFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRST-TPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGEDLLQNM 581
            +F+ KRLIGR   DP V    K LPF V  V+   +P+I   V      T  PEE+ A+ L +++  AE  L + + + V+T+P  F+  Q    + A  +AGL+V+R++ EPTA A+ Y                EK  ++F++G G  DV++     GV ++ A +G   +GGED  Q +
Sbjct:   93 VFDAKRLIGRTWNDPSVQQDIKFLPFKV--VEKKTKPYIQVDVGGGQTKTFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVMRIINEPTAAAIAYGLDKRE---------GEKNILVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQRV 263          
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HSP72_MOUSE (Heat shock-related 70 kDa protein 2 OS=Mus musculus GN=Hspa2 PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.430e-17
Identity = 58/181 (32.04%), Postives = 97/181 (53.59%), Query Frame = 3
Query:   45 IFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGEDLLQNM 581
            IF+ KRLIGR   D  V +  K  PF V  V  G +P +        ++  PEE+ ++ L +++ +AE  L   +++ V+T+P  F+  Q    + A  + GL+VLR++ EPTA A+ Y       + +   +G EK  +IF++G G  DV++     G+ ++K+ +G   +GGED    M
Sbjct:   68 IFDRKRLIGRKFEDATVQSDMKHWPFRV--VSEGGKPKVQVEYKGEMKTFFPEEISSMVLTKMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAIAY------GLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFELKSTAGDTHLGGEDFDNRM 240          
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HSP72_BOVIN (Heat shock-related 70 kDa protein 2 OS=Bos taurus GN=HSPA2 PE=2 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 1.430e-17
Identity = 58/181 (32.04%), Postives = 98/181 (54.14%), Query Frame = 3
Query:   45 IFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGEDLLQNM 581
            IF+ KRLIGR   D  V +  K  PF V  V  G +P +        ++  PEE+ ++ L +++ +AE  L   +++ V+T+P  F+  Q    + A  + GL+VLR++ EPTA A+ Y       + +   +G EK  +IF++G G  DV++     G+ ++K+ +G   +GGED   +M
Sbjct:   68 IFDAKRLIGRKFEDATVQSDMKHWPFRV--VSEGGKPKVQVEYKGEIKTFFPEEISSMVLTKMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAIAY------GLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNSM 240          
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HSP72_ANOAL (Heat shock protein 70 A2 OS=Anopheles albimanus GN=HSP70A2 PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.430e-17
Identity = 62/182 (34.07%), Postives = 101/182 (55.49%), Query Frame = 3
Query:   45 IFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTV-SATAGGVSQIKALSGSA-IGGEDLLQNM 581
            +F+ KRLIGR   DP + A  K  PF V   D G +P I        ++  PEE+ ++ L +++  AE  L + ++N V+T+P  F+  Q    + A A+AGL+V+R++ EPTA AL Y       + +NL    E+  +IF++G G  DV++ +   G + +++A +G   +GGED    M
Sbjct:   65 VFDAKRLIGRKFDDPKIQADMKHWPFTVVN-DCG-KPKIRVEFKGERKTFAPEEISSMVLTKMKETAEAYLGQSVKNAVITVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAALAY------GLDKNL--KGERNVLIFDLGGGTFDVSILTIDEGSLFEVRATAGDTHLGGEDFDNRM 236          
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HSP71_ARATH (Heat shock cognate 70 kDa protein 1 OS=Arabidopsis thaliana GN=HSC70-1 PE=1 SV=3)

HSP 1 Score: 89.3521 bits (220), Expect = 1.430e-17
Identity = 59/181 (32.60%), Postives = 96/181 (53.04%), Query Frame = 3
Query:   45 IFNMKRLIGRVDTDPVVHASKSL-PFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGEDLLQNM 581
            +F+ KRLIGR  +D  V +   L PF +Q      +P I        +    EE+ ++ L+++R +AE  L   I+N V+T+P  F+  Q    + A  +AGL+V+R++ EPTA A+ Y       + +   S  EK  +IF++G G  DV++     G+ ++KA +G   +GGED    M
Sbjct:   70 VFDAKRLIGRRFSDSSVQSDMKLWPFKIQAGPAD-KPMIYVEYKGEEKEFAAEEISSMVLIKMREIAEAYLGVTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAY------GLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRM 243          
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: HSP71_ANOAL (Heat shock protein 70 A1 OS=Anopheles albimanus GN=HSP70A1 PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.430e-17
Identity = 62/182 (34.07%), Postives = 101/182 (55.49%), Query Frame = 3
Query:   45 IFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTV-SATAGGVSQIKALSGSA-IGGEDLLQNM 581
            +F+ KRLIGR   DP + A  K  PF V   D G +P I        ++  PEE+ ++ L +++  AE  L + ++N V+T+P  F+  Q    + A A+AGL+V+R++ EPTA AL Y       + +NL    E+  +IF++G G  DV++ +   G + +++A +G   +GGED    M
Sbjct:   65 VFDAKRLIGRKFDDPKIQADMKHWPFTVVN-DCG-KPKIRVEFKGERKTFAPEEISSMVLTKMKETAEAYLGQSVKNAVITVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAALAY------GLDKNL--KGERNVLIFDLGGGTFDVSILTIDEGSLFEVRATAGDTHLGGEDFDNRM 236          
BLAST of CX296750 vs. ExPASy Swiss-Prot
Match: GRP78_SPETR (78 kDa glucose-regulated protein OS=Spermophilus tridecemlineatus GN=HSPA5 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.430e-17
Identity = 60/182 (32.97%), Postives = 95/182 (52.20%), Query Frame = 3
Query:   45 IFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRST-TPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAXXXXXSVHENLGSGSEKIAVIFNMGAGYCDVTVSATAGGVSQIKALSGSA-IGGEDLLQNM 581
            +F+ KRLIGR   DP V    K LPF V  V+   +P+I   +      T  PEE+ A+ L +++  AE  L + + + V+T+P  F+  Q    + A  +AGL+V+R++ EPTA A+ Y                EK  ++F++G G  DV++     GV ++ A +G   +GGED  Q +
Sbjct:   92 VFDAKRLIGRTWNDPSVQQDIKFLPFKV--VEKKTKPYIQVDIGGGQTKTFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVMRIINEPTAAAIAYGLDKRE---------GEKNILVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQRV 262          
The following BLAST results are available for this feature:
BLAST of CX296750 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP70_MIMIV1.095e-1732.39Heat shock 70 kDa protein homolog OS=Acanthamoeba ... [more]
HS7C1_DICDI1.095e-1735.23Heat shock cognate 70 kDa protein 1 OS=Dictyosteli... [more]
GRP78_CANGA1.095e-1733.5278 kDa glucose-regulated protein homolog OS=Candid... [more]
GRP78_BOVIN1.095e-1733.5278 kDa glucose-regulated protein OS=Bos taurus GN=... [more]
HSP72_MOUSE1.430e-1732.04Heat shock-related 70 kDa protein 2 OS=Mus musculu... [more]
HSP72_BOVIN1.430e-1732.04Heat shock-related 70 kDa protein 2 OS=Bos taurus ... [more]
HSP72_ANOAL1.430e-1734.07Heat shock protein 70 A2 OS=Anopheles albimanus GN... [more]
HSP71_ARATH1.430e-1732.60Heat shock cognate 70 kDa protein 1 OS=Arabidopsis... [more]
HSP71_ANOAL1.430e-1734.07Heat shock protein 70 A1 OS=Anopheles albimanus GN... [more]
GRP78_SPETR1.430e-1732.9778 kDa glucose-regulated protein OS=Spermophilus t... [more]

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Properties
Property NameValue
Genbank descriptionC05802D04SK FerrChloL1 Citrus clementina cDNA clone C05802D04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296750 ID=CX296750; Name=CX296750; organism=Citrus clementina; type=EST; length=582bp
GAGGCTCACTCTCCCATGAACATGAAATGTTATCTGGAGCTGCTATTTTC
AACATGAAACGCTTAATCGGCAGAGTTGACACCGATCCTGTGGTCCATGC
AAGCAAAAGCTTACCGTTTTTGGTCCAAACCGTGGACATTGGTGTTCGTC
CATTTATTGCAGCCTTAGTGAACAATGCGTGGAGATCCACCACTCCCGAA
GAAGTCCTGGCAATATTTTTGGTGGAACTAAGAGCCATGGCTGAAACTCA
GTTGAAACGCCCAATAAGAAATGTTGTTCTAACCATTCCAGTTTCATTCA
GTCGTTTCCAACTGACACGCATTGAACGAGCATGTGCTATGGCTGGCCTT
CATGTCCTCAGACTTATGCCTGAACCAACTGCTGTAGCTCTATTGTATGC
TCAGCAGCAGCAACAGAGTGTGCATGAGAATTTGGGCAGTGGAAGTGAGA
AGATTGCGGTCATTTTCAATATGGGTGCTGGGTACTGTGATGTCACTGTG
AGTGCTACAGCTGGAGGAGTTTCACAGATTAAAGCTTTATCAGGAAGTGC
TATTGGAGGAGAGGATTTACTTCAGAATATGA
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