CX296853

Overview
NameCX296853
Unique NameCX296853
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length694
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1060 contig Ccv1_Contig1060:85..779. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX296853 vs. ExPASy Swiss-Prot
Match: BEV1B_BETVE (Major pollen allergen Bet v 1-B OS=Betula verrucosa GN=BETV1B PE=1 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 4.962e-32
Identity = 72/160 (45.00%), Postives = 102/160 (63.75%), Query Frame = 3
Query:   60 MGVLTLNVEDTSTLPPEKLFKLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPNA 539
            MGV     E TS +P  +LFK F+L+ DTL+PKV PQ + +VE I G+GGPG+IKK  F EG+ +KY K RVD +D  N  Y+Y+ I  EG A   T++ +  E K+V TPDGGS   +  K++ K   E+K E +K   EK + + +A+E+Y LA+ +A
Sbjct:    1 MGVFNYETETTSVIPAARLFKAFILEGDTLIPKVAPQAISSVENIEGNGGPGTIKKITFPEGSPFKYVKERVDEVDHANFKYSYSMI--EGGALGDTLEKICNEIKIVATPDGGSILKISNKYHTKGDHEMKAEHMKAIKEKGEALLRAVESYLLAHSDA 158          
BLAST of CX296853 vs. ExPASy Swiss-Prot
Match: BEV1C_BETVE (Major pollen allergen Bet v 1-C OS=Betula verrucosa GN=BETV1C PE=1 SV=2)

HSP 1 Score: 137.502 bits (345), Expect = 6.480e-32
Identity = 72/160 (45.00%), Postives = 102/160 (63.75%), Query Frame = 3
Query:   60 MGVLTLNVEDTSTLPPEKLFKLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPNA 539
            MGV     E TS +P  +LFK F+L+ DTL+PKV PQ + +VE I G+GGPG+IKK  F EG+ +KY K RVD +D  N  Y+Y+ I  EG A   T++ +  E K+V TPDGGS   +  K++ K   E+K E +K   EK + + +A+E+Y LA+ +A
Sbjct:    1 MGVFNYESETTSVIPAARLFKAFILEGDTLIPKVAPQAISSVENIEGNGGPGTIKKITFPEGSPFKYVKERVDEVDHANFKYSYSMI--EGGALGDTLEKICNEIKIVATPDGGSILKISNKYHTKGDQEMKAEHMKAIKEKGEALLRAVESYLLAHSDA 158          
BLAST of CX296853 vs. ExPASy Swiss-Prot
Match: BEV1K_BETVE (Major pollen allergen Bet v 1-K OS=Betula verrucosa GN=BETV1K PE=1 SV=2)

HSP 1 Score: 137.117 bits (344), Expect = 8.463e-32
Identity = 72/160 (45.00%), Postives = 102/160 (63.75%), Query Frame = 3
Query:   60 MGVLTLNVEDTSTLPPEKLFKLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPNA 539
            MGV     E TS +P  +LFK F+L+ DTL+PKV PQ + +VE I G+GGPG+IKK  F EG+ +KY K RVD +D  N  Y+Y+ I  EG A   T++ +  E K+V TPDGGS   +  K++ K   E+K E +K   EK + + +A+E+Y LA+ +A
Sbjct:    1 MGVFNYESETTSVIPAARLFKAFILEGDTLIPKVAPQAISSVENIEGNGGPGTIKKITFPEGSPFKYVKERVDEVDHANFKYSYSMI--EGGALGDTLEKICNEIKIVATPDGGSILKISNKYHTKGDHEMKAEHMKAIKEKGEALLRAVESYLLAHSDA 158          
BLAST of CX296853 vs. ExPASy Swiss-Prot
Match: BEV1F_BETVE (Major pollen allergen Bet v 1-F/I OS=Betula verrucosa GN=BETV1F PE=1 SV=2)

HSP 1 Score: 135.961 bits (341), Expect = 1.885e-31
Identity = 72/162 (44.44%), Postives = 102/162 (62.96%), Query Frame = 3
Query:   60 MGVLTLNVEDTSTLPPEKLFKLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEG--EGDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPNA 539
            MGV    +E TS +P  +LFK F+L  D L PKV PQ + +VE I G+GGPG+IKK +F EG  +KY K RVD +D  N  Y+Y+ IEG   GD    T++ +S E K+V TP+GGS   +  K++ K   E+K EQ+K   E  + + +A+E+Y LA+ +A
Sbjct:    1 MGVFNYEIEATSVIPAARLFKAFILDGDNLFPKVAPQAISSVENIEGNGGPGTIKKISFPEGFPFKYVKDRVDEVDHTNFKYSYSVIEGGPVGD----TLEKISNEIKIVATPNGGSILKINNKYHTKGDHEVKAEQIKASKEMGETLLRAVESYLLAHSDA 158          
BLAST of CX296853 vs. ExPASy Swiss-Prot
Match: ABR18_PEA (ABA-responsive protein ABR18 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.462e-31
Identity = 68/159 (42.77%), Postives = 104/159 (65.41%), Query Frame = 3
Query:   60 MGVLTLNVEDTSTLPPEKLFKLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPN 536
            MGV T   + TST+PP KLFK  V   D ++PKV+  + K VE++ G+GGPG++KK  FVEG    Y  H+V+A+D     YNY+ + G G ++I  ++ +S+E+K+   P+GGS   +++K++ K  A+  E++V+ G  K   +FKA+EAY LANPN
Sbjct:    1 MGVFTYENDTTSTVPPAKLFKAVVHDADLIVPKVVDSI-KTVEILEGNGGPGTVKKLTFVEGGQTLYVLHKVEAIDDAKFEYNYSIVGGVGISDI--VEKISFEAKLFEGPNGGSVGKMIVKYHTKGDAKPIEKEVEEGKAKGDALFKAIEAYVLANPN 156          
BLAST of CX296853 vs. ExPASy Swiss-Prot
Match: MPAG1_ALNGL (Major pollen allergen Aln g 1 OS=Alnus glutinosa PE=1 SV=2)

HSP 1 Score: 135.191 bits (339), Expect = 3.216e-31
Identity = 75/162 (46.30%), Postives = 100/162 (61.73%), Query Frame = 3
Query:   60 MGVLTLNVEDTSTLPPEKLFKLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEG--EGDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPNA 539
            MGV     E  S +P  +LFK F+L  D LLPKV P+ V +VE I G+GGPG+IKK  F EG+ +KY K RVD +D+ N  Y+++ IEG   GDA    ++ V  E K+V  PDGGS   +  KF+ K   EI  EQ+K   EK  G+ KA+E+Y LA+ +A
Sbjct:    1 MGVFNYEAETPSVIPAARLFKAFILDGDKLLPKVAPEAVSSVENIEGNGGPGTIKKITFPEGSPFKYVKERVDEVDRVNFKYSFSVIEGGAVGDA----LEKVCNEIKIVAAPDGGSILKISNKFHTKGDHEINAEQIKIEKEKAVGLLKAVESYLLAHSDA 158          
BLAST of CX296853 vs. ExPASy Swiss-Prot
Match: BEV1J_BETVE (Major pollen allergen Bet v 1-J OS=Betula verrucosa GN=BETV1J PE=1 SV=2)

HSP 1 Score: 134.806 bits (338), Expect = 4.200e-31
Identity = 72/162 (44.44%), Postives = 101/162 (62.35%), Query Frame = 3
Query:   60 MGVLTLNVEDTSTLPPEKLFKLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEG--EGDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPNA 539
            MGV     E TS +P  +LFK F+L  D L PKV PQ + +VE I G+GGPG+IKK +F EG  +KY K RVD +D  N  Y+Y+ IEG   GD    T++ +S E K+V TP+GGS   +  K++ K   E+K EQ+K   E  + + +A+E+Y LA+ +A
Sbjct:    1 MGVFNYETEATSVIPAARLFKAFILDGDNLFPKVAPQAISSVENIEGNGGPGTIKKISFPEGFPFKYVKDRVDEVDHTNFKYSYSVIEGGPVGD----TLEKISNEIKIVATPNGGSILKINNKYHTKGDHEVKAEQIKASKEMGETLLRAVESYLLAHSDA 158          
BLAST of CX296853 vs. ExPASy Swiss-Prot
Match: BEV1E_BETVE (Major pollen allergen Bet v 1-E OS=Betula verrucosa GN=BETV1E PE=1 SV=2)

HSP 1 Score: 134.806 bits (338), Expect = 4.200e-31
Identity = 72/162 (44.44%), Postives = 101/162 (62.35%), Query Frame = 3
Query:   60 MGVLTLNVEDTSTLPPEKLFKLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEG--EGDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPNA 539
            MGV     E TS +P  +LFK F+L  D L PKV PQ + +VE I G+GGPG+IKK +F EG  +KY K RVD +D  N  Y+Y+ IEG   GD    T++ +S E K+V TP+GGS   +  K++ K   E+K EQ+K   E  + + +A+E+Y LA+ +A
Sbjct:    1 MGVFNYETEATSVIPAARLFKAFILDGDNLFPKVAPQAISSVENIEGNGGPGTIKKISFPEGIPFKYVKGRVDEVDHTNFKYSYSVIEGGPVGD----TLEKISNEIKIVATPNGGSILKINNKYHTKGDHEVKAEQIKASKEMGETLLRAVESYLLAHSDA 158          
BLAST of CX296853 vs. ExPASy Swiss-Prot
Match: BEV1M_BETVE (Major pollen allergen Bet v 1-M/N OS=Betula verrucosa GN=BETV1M PE=1 SV=2)

HSP 1 Score: 134.42 bits (337), Expect = 5.486e-31
Identity = 71/160 (44.38%), Postives = 100/160 (62.50%), Query Frame = 3
Query:   60 MGVLTLNVEDTSTLPPEKLFKLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPNA 539
            MGV     E TS +P  +LFK F+L  D L+PKV PQ + +VE I G+GGPG+IKK  F EG+ +KY K RVD +D  N  Y+Y+ I  EG A   T++ +  E K+V TPDGGS   +  K++ K   E+K E +K   EK + + +A+E+Y LA+ +A
Sbjct:    1 MGVFNYESETTSVIPAARLFKAFILDGDNLIPKVAPQAISSVENIEGNGGPGTIKKITFPEGSPFKYVKERVDEVDHANFKYSYSMI--EGGALGDTLEKICNEIKIVATPDGGSILKISNKYHTKGDHEMKAEHMKAIKEKGEALLRAVESYLLAHSDA 158          
BLAST of CX296853 vs. ExPASy Swiss-Prot
Match: MPAC2_CARBE (Major pollen allergen Car b 1 isoform 2 OS=Carpinus betulus PE=1 SV=2)

HSP 1 Score: 132.109 bits (331), Expect = 2.722e-30
Identity = 70/159 (44.03%), Postives = 98/159 (61.64%), Query Frame = 3
Query:   60 MGVLTLNVEDTSTLPPEKLFKLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGE--GDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALAN 530
            MGV     E TS +P  +LFK F+L  + L+PKV PQ V +VE + G+GGPG+IKK  F EG+  KY K RV+ +D  N  YNYT IEG+  GD     ++ VS+E K+V  P GGS   +  KF+ K   E+  E++KG  E  + + +A+E+Y LA+
Sbjct:    1 MGVFNYEAETTSVIPAARLFKAFILDGNKLIPKVSPQAVSSVENVEGNGGPGTIKKITFSEGSPVKYVKERVEEIDHTNFKYNYTVIEGDVLGD----KLEKVSHELKIVAAPGGGSIVKISSKFHAKGYHEVNAEEMKGAKEMAEKLLRAVESYLLAH 155          
The following BLAST results are available for this feature:
BLAST of CX296853 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
BEV1B_BETVE4.962e-3245.00Major pollen allergen Bet v 1-B OS=Betula verrucos... [more]
BEV1C_BETVE6.480e-3245.00Major pollen allergen Bet v 1-C OS=Betula verrucos... [more]
BEV1K_BETVE8.463e-3245.00Major pollen allergen Bet v 1-K OS=Betula verrucos... [more]
BEV1F_BETVE1.885e-3144.44Major pollen allergen Bet v 1-F/I OS=Betula verruc... [more]
ABR18_PEA2.462e-3142.77ABA-responsive protein ABR18 OS=Pisum sativum PE=2... [more]
MPAG1_ALNGL3.216e-3146.30Major pollen allergen Aln g 1 OS=Alnus glutinosa P... [more]
BEV1J_BETVE4.200e-3144.44Major pollen allergen Bet v 1-J OS=Betula verrucos... [more]
BEV1E_BETVE4.200e-3144.44Major pollen allergen Bet v 1-E OS=Betula verrucos... [more]
BEV1M_BETVE5.486e-3144.38Major pollen allergen Bet v 1-M/N OS=Betula verruc... [more]
MPAC2_CARBE2.722e-3044.03Major pollen allergen Car b 1 isoform 2 OS=Carpinu... [more]

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Properties
Property NameValue
Genbank descriptionC05803E08SK FerrChloL1 Citrus clementina cDNA clone C05803E08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296853 ID=CX296853; Name=CX296853; organism=Citrus clementina; type=EST; length=694bp
GCCGAATTCGGCACGAGGGTAGTTTTCATCTTCTTTCTTTGTTTAACTCT
TAGACAATCATGGGTGTTCTCACGTTGAATGTAGAGGATACAAGCACTCT
CCCCCCTGAAAAGTTGTTCAAACTTTTTGTCCTTCAGTTCGACACCCTTC
TGCCCAAAGTCCTGCCTCAGGTTGTAAAGAACGTTGAATTGATTTCAGGG
GATGGAGGCCCTGGAAGCATCAAGAAGTTTAACTTTGTTGAAGGTGCTGA
TTGGAAGTACTTTAAGCATAGGGTTGATGCATTGGACAAAGAGAACAAGA
TATACAATTACACGGCAATTGAAGGTGAGGGTGATGCTAACATCCCTACT
ATTGATCATGTTTCTTATGAGAGTAAGGTTGTGGGCACCCCTGACGGAGG
AAGCAAGAGCACCGTTGTTATCAAGTTCTATCCCAAACCAGGTGCCGAGA
TTAAGGAAGAGCAGGTTAAGGGAGGCTTGGAAAAGGAGAAGGGAATTTTT
AAGGCTCTGGAAGCCTATGCCTTGGCAAACCCCAATGCCGTATAAGCTCT
TACGTCAACACTTCACCGCACTTGCGTCGCCTTTGTTGCAACATTATGAA
TAATCATGTTTATGGCTTCCGTATGTCGTGTCTCTTTGTTTTCAATATGC
CAATTTATATAATTGGCTTTTGGCTAAATAAAAAAAAAAAAAAA
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