CX296885

Overview
NameCX296885
Unique NameCX296885
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length622
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14514 contig Ccv1_Contig14514:197..818. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX296885 vs. ExPASy Swiss-Prot
Match: C71AN_ARATH (Cytochrome P450 71A23 OS=Arabidopsis thaliana GN=CYP71A23 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.302e-19
Identity = 46/111 (41.44%), Postives = 71/111 (63.96%), Query Frame = -1
Query:  281 LPAKARVIVNSWATGRDPMYW-TEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFGATVRRKQDLCMIP 610
            +PA  +VIVN WA GR+   W  +   F PER ++   D++G +FE IPFGAGRR+CPG+SF +   E+ LA L++ F+W+  +    ++ D+ E+ G+ +RR   L +IP
Sbjct:  373 IPAGTQVIVNLWAVGREAATWGPDANEFRPERHLESPSDFRGQDFELIPFGAGRRMCPGISFAVVLNEVVLANLVHGFDWQSID----DETDVAESIGSVIRRMHPLYVIP 479          
BLAST of CX296885 vs. ExPASy Swiss-Prot
Match: C71AO_ARATH (Cytochrome P450 71A24 OS=Arabidopsis thaliana GN=CYP71A24 PE=2 SV=3)

HSP 1 Score: 94.7449 bits (234), Expect = 3.927e-19
Identity = 44/103 (42.72%), Postives = 63/103 (61.17%), Query Frame = -1
Query:  305 LPAKARVIVNSWATGRDPMYW-TEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFGATVRR 610
            +PA   V++N+WA GR+   W  + E F PER ++  VDY+G + E +PFGAGRRICP +SF +   E+ LA L++ F+W LP        D+ E+ G  V R
Sbjct:  377 IPAGTHVMINAWAIGREAATWGPDAEEFRPERHLNSYVDYRGQDTELVPFGAGRRICPAISFAVVLDEVVLANLVHQFDWTLPEESTEYQTDVAESTGMAVHR 479          
BLAST of CX296885 vs. ExPASy Swiss-Prot
Match: C71AG_ARATH (Cytochrome P450 71A16 OS=Arabidopsis thaliana GN=CYP71A16 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 5.129e-19
Identity = 47/115 (40.87%), Postives = 69/115 (60.00%), Query Frame = -1
Query:  281 GPPLPAKARVIVNSWATGRDPMYW-TEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMK-HEDLDMTEAFGATVRRKQDLCMIP 619
            G  + A  +VI+N+WA  RD   W ++ + F PER  D + D+ G NF+YIPFGAGRR+CPG+  G     +TLA L+  F+W++ +G   ++  D+ E  G  V RK  L + P
Sbjct:  380 GYDITAGTQVIINAWAIQRDTATWGSDAQEFRPERHFDSTWDFVGRNFKYIPFGAGRRLCPGIGLGSVMASVTLANLVKRFDWRVEDGPSGYDKPDLVEGAGIDVCRKFPLVVFP 494          
BLAST of CX296885 vs. ExPASy Swiss-Prot
Match: C82A4_SOYBN (Cytochrome P450 82A4 OS=Glycine max GN=CYP82A4 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 6.699e-19
Identity = 47/96 (48.96%), Postives = 62/96 (64.58%), Query Frame = -1
Query:  314 RVIVNSWATGRDPMYWTEPESFIPERFID--HSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFGAT 595
            R+I N W    DP  W++P  F P+RF+     +D KG +F+ +PFG+GRR+CPG+SFGL +V L LA  L+ FE   P+    E LDMTEAFG T
Sbjct:  410 RLITNIWKIHTDPNVWSDPFEFKPDRFLTTHKDIDVKGHHFQLLPFGSGRRVCPGISFGLQTVHLALASFLHSFEILNPS---TEPLDMTEAFGVT 502          
BLAST of CX296885 vs. ExPASy Swiss-Prot
Match: C82A3_SOYBN (Cytochrome P450 82A3 OS=Glycine max GN=CYP82A3 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 5.671e-18
Identity = 48/96 (50.00%), Postives = 60/96 (62.50%), Query Frame = -1
Query:  314 RVIVNSWATGRDPMYWTEPESFIPERFID--HSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFGAT 595
            R+I N W   RDP  W++P  F PERF+     VD +G NFE +PFG+GRR+C GMS GL  V  TLA LL+ F+   P+    E +DMTE FG T
Sbjct:  412 RLIHNLWKIHRDPSVWSDPLEFKPERFLTTHKDVDLRGHNFELLPFGSGRRVCAGMSLGLNMVHFTLANLLHSFDILNPSA---EPVDMTEFFGFT 504          
BLAST of CX296885 vs. ExPASy Swiss-Prot
Match: C78A4_PINRA (Cytochrome P450 78A4 OS=Pinus radiata GN=CYP78A4 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.263e-17
Identity = 46/118 (38.98%), Postives = 65/118 (55.08%), Query Frame = -1
Query:  278 GPPLPAKARVIVNSWATGRDPMYWTEPESFIPERFI----DHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFGATVRRKQDLCMIPI 619
            G  +PA    +VN W+   DP  W  P  F PERF+       VD +G +    PFGAGRR+CPG + GLA+V L +A LL+HFEW LP+      +D++E    +    + L  +P+
Sbjct:  429 GMCVPAGTTAMVNMWSITHDPNIWESPYEFRPERFVVFEGGEEVDVRGNDLRLAPFGAGRRVCPGKALGLATVNLWVAKLLHHFEW-LPHA--EHPVDLSEVLKLSCEMARPLHCVPV 543          
BLAST of CX296885 vs. ExPASy Swiss-Prot
Match: C75A1_PINTA (Cytochrome P450 750A1 OS=Pinus taeda GN=CYP750A1 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.263e-17
Identity = 49/123 (39.84%), Postives = 70/123 (56.91%), Query Frame = -1
Query:  269 LPAKARVIVNSWATGRDPMYW-TEPESFIPERFI---DHSVDYKG--TNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFGATVRRKQDLCMIP---IPHC 610
            +P K  VI+N WA GRDP  W  +   F PERF+   ++ +D  G  ++F  +PFGAGRR CPG +  + +VE TLA LL+ F+W++       +LDM EA    + R+  L   P   +P C
Sbjct:  404 IPKKTMVIMNLWAIGRDPSVWGADASEFKPERFMQMEENGIDLSGGQSDFRMLPFGAGRRTCPGSAMAILTVEFTLAQLLHTFDWRVEG--DPSELDMKEACATKMPRQTPLLAYPRLRLPRC 524          
BLAST of CX296885 vs. ExPASy Swiss-Prot
Match: C78AB_ORYSJ (Cytochrome P450 78A11 OS=Oryza sativa subsp. japonica GN=CYP78A11 PE=1 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 1.650e-17
Identity = 44/98 (44.90%), Postives = 58/98 (59.18%), Query Frame = -1
Query:  338 GPPLPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHS----VDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLD 619
            G  +PA    +VN WA   D   W +PE+F PERFI       VD +G +    PFGAGRR+CPG + GLA+V L +A L++ F+W LP+G     LD
Sbjct:  433 GMVVPAGTTAMVNMWAITHDGEVWADPEAFAPERFIPSEGGADVDVRGGDLRLAPFGAGRRVCPGKNLGLATVTLWVARLVHAFDWFLPDGSPPVSLD 530          
BLAST of CX296885 vs. ExPASy Swiss-Prot
Match: C78A1_MAIZE (Cytochrome P450 78A1 OS=Zea mays GN=CYP78A1 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.676e-17
Identity = 46/119 (38.66%), Postives = 64/119 (53.78%), Query Frame = -1
Query:  275 GPPLPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHS----VDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFGATVRRKQDLCMIPIP 619
            G  +PA    +VN WA   D   W +P++F PERF+       VD +G +    PFGAGRR+CPG + GL +V L +A L++ F+W LP+G     LD  E    ++  K  L    IP
Sbjct:  428 GMVVPAGTTAMVNMWAITHDAAVWADPDAFAPERFLPSEGGADVDVRGVDLRLAPFGAGRRVCPGKNLGLTTVGLWVARLVHAFQWALPDGAAAVCLD--EVLKLSLEMKTPLVAAAIP 544          
BLAST of CX296885 vs. ExPASy Swiss-Prot
Match: C82A2_SOYBN (Cytochrome P450 82A2 OS=Glycine max GN=CYP82A2 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 6.933e-16
Identity = 46/96 (47.92%), Postives = 58/96 (60.42%), Query Frame = -1
Query:  314 RVIVNSWATGRDPMYWTEPESFIPERFI--DHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFGAT 595
            R+I N      D   W+ P  F PERF+  D  +D KG +F+ +PFG GRRICPG++ GL +V LTLA  L+ FE   P+    E LDMTE F AT
Sbjct:  407 RLITNLSKIHTDHNVWSNPLEFKPERFLTTDKDIDMKGQHFQLLPFGGGRRICPGINLGLQTVRLTLASFLHSFEILNPS---TEPLDMTEVFRAT 499          
The following BLAST results are available for this feature:
BLAST of CX296885 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
C71AN_ARATH2.302e-1941.44Cytochrome P450 71A23 OS=Arabidopsis thaliana GN=C... [more]
C71AO_ARATH3.927e-1942.72Cytochrome P450 71A24 OS=Arabidopsis thaliana GN=C... [more]
C71AG_ARATH5.129e-1940.87Cytochrome P450 71A16 OS=Arabidopsis thaliana GN=C... [more]
C82A4_SOYBN6.699e-1948.96Cytochrome P450 82A4 OS=Glycine max GN=CYP82A4 PE=... [more]
C82A3_SOYBN5.671e-1850.00Cytochrome P450 82A3 OS=Glycine max GN=CYP82A3 PE=... [more]
C78A4_PINRA1.263e-1738.98Cytochrome P450 78A4 OS=Pinus radiata GN=CYP78A4 P... [more]
C75A1_PINTA1.263e-1739.84Cytochrome P450 750A1 OS=Pinus taeda GN=CYP750A1 P... [more]
C78AB_ORYSJ1.650e-1744.90Cytochrome P450 78A11 OS=Oryza sativa subsp. japon... [more]
C78A1_MAIZE3.676e-1738.66Cytochrome P450 78A1 OS=Zea mays GN=CYP78A1 PE=2 S... [more]
C82A2_SOYBN6.933e-1647.92Cytochrome P450 82A2 OS=Glycine max GN=CYP82A2 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC05803H06SK FerrChloL1 Citrus clementina cDNA clone C05803H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296885 ID=CX296885; Name=CX296885; organism=Citrus clementina; type=EST; length=622bp
TTTATTATCAAATACACACATAATGTGTGGTGAATTATTTCTTATATACA
AGTGCTGAAGCTCAGCTTGATTACTGTTATTAGTCACTAAACTATTAACA
AACTATATTAAGCTGAACATAACAACTTTAACTAATCAATCACGTGTACA
CATAATTTCATAATCACCAGGCATGACGTGGCATGCCACATCATCAATGT
GTAACTGATTGATCCTGCTACTATCATCCTCTGCTCTGCTGACTACACTA
CAAGTGTGAGCTTCCTTAACAGTGTGGAATAGGAATCATGCACAGATCTT
GTTTTCTTCTTACTGTCGCGCCAAAGGCCTCTGTCATGTCCAAATCCTCA
TGCTTCATTCCATTTGGTAGTTTCCATTCGAAATGGTATAATAACATCGC
GAGTGTAAGCTCCACGCTGGCCAGACCAAATGACATTCCAGGGCATATCC
TCCTACCAGCACCAAATGGGATGTACTCAAAATTAGTCCCCTTGTAGTCA
ACAGAATGGTCAATGAATCTCTCGGGAATAAAGCTCTCAGGTTCAGTCCA
ATACATGGGATCTCTTCCAGTTGCCCATGAATTAACAATGACTCTGGCTT
TTGCAGGAAGGGGGGGCCCGGT
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