CX296885

Overview
NameCX296885
Unique NameCX296885
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length622
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14514 contig Ccv1_Contig14514:197..818. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX296885 vs. ExPASy Swiss-Prot
Match: TCMO_GLYEC (Trans-cinnamate 4-monooxygenase OS=Glycyrrhiza echinata GN=CYP73A14 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 5.869e-15
Identity = 37/94 (39.36%), Postives = 55/94 (58.51%), Query Frame = -1
Query:  344 GPPLPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHS--VDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHED 619
            G  +PA+++++VN+W    +P  W  PE F PERF++    V+  G +F Y+PFG GRR CPG+   L  + +TL  L+ +FE   P G    D
Sbjct:  387 GYDIPAESKILVNAWWLANNPANWKRPEEFRPERFLEEESHVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGQSKLD 480          
BLAST of CX296885 vs. ExPASy Swiss-Prot
Match: C81F1_ARATH (Cytochrome P450 81F1 OS=Arabidopsis thaliana GN=CYP81F1 PE=2 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 5.869e-15
Identity = 45/110 (40.91%), Postives = 62/110 (56.36%), Query Frame = -1
Query:  293 GPPLPAKARVIVNSWATGRDPMYWTEPESFIPERFIDH-SVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFGATVRRKQDL 619
            G  +P    V+VN+WA  RDP  W EPE F P+R+ D    DY    ++ +PFG GRR CPG   G   V L L  L+  FEW+    +K E++DM+E+ G  +R+   L
Sbjct:  381 GYDVPRDTIVMVNAWAIHRDPEIWEEPEKFNPDRYNDGCGSDY--YVYKLMPFGNGRRTCPGAGLGQRIVTLALGSLIQCFEWE---NVKGEEMDMSESTGLGMRKMDPL 485          
BLAST of CX296885 vs. ExPASy Swiss-Prot
Match: TCMO_RUTGR (Trans-cinnamate 4-monooxygenase OS=Ruta graveolens GN=CYP73A2 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 7.665e-15
Identity = 35/94 (37.23%), Postives = 57/94 (60.64%), Query Frame = -1
Query:  344 GPPLPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHS--VDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHED 619
            G  +PA+++++VN+W    +P +W +P+ F PERF++    V+  G +F YIPFG GRR CPG+   L  + +T+  ++ +FE   P G    D
Sbjct:  387 GYDIPAESKILVNAWWLANNPAHWKDPQVFRPERFLEEESGVEANGNDFRYIPFGVGRRSCPGIILALPILGITIGRMVQNFELLPPPGQSKID 480          
BLAST of CX296885 vs. ExPASy Swiss-Prot
Match: TCMO_PETCR (Trans-cinnamate 4-monooxygenase OS=Petroselinum crispum GN=CYP73A10 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 7.665e-15
Identity = 35/94 (37.23%), Postives = 57/94 (60.64%), Query Frame = -1
Query:  344 GPPLPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHS--VDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHED 619
            G  +PA+++++VN+W    +P +W +P+ F PERF++    V+  G +F+YIPFG GRR CPG+   L  + + +  L+ +FE   P G    D
Sbjct:  388 GYDIPAESKILVNAWWLANNPAHWNKPDEFRPERFLEEESKVEANGNDFKYIPFGVGRRSCPGIILALPILGIVIGRLVQNFELLPPPGQSKID 481          
BLAST of CX296885 vs. ExPASy Swiss-Prot
Match: TCMO_PEA (Trans-cinnamate 4-monooxygenase OS=Pisum sativum GN=CYP73A9 PE=2 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 7.665e-15
Identity = 36/94 (38.30%), Postives = 56/94 (59.57%), Query Frame = -1
Query:  344 GPPLPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHS--VDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHED 619
            G  +PA+++++VN+W    +P  W +PE F PERF++    V+  G +F Y+PFG GRR CPG+   L  + +T+  L+ +FE   P G    D
Sbjct:  387 GFDIPAESKILVNAWWLANNPALWKKPEEFRPERFLEEEAHVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFELLPPPGQSKID 480          
BLAST of CX296885 vs. ExPASy Swiss-Prot
Match: C93B1_GLYEC (Licodione synthase OS=Glycyrrhiza echinata GN=CYP93B1 PE=1 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.001e-14
Identity = 45/132 (34.09%), Postives = 74/132 (56.06%), Query Frame = -1
Query:  251 LPAKARVIVNSWATGRDPMYWTEPESFIPERFI----DHS--VDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKL--PNG--MKHED--LDMTEAFGATVRRKQDLCMIPIPHC*GSSHL 610
            +P  + + VN W+ GR+P +W  P  F PERF+    D S  VD +G++F+ +PFG+GRR+CPG+S  +  V   L  ++  F++ +  P G  +K +D  +++ E  G T  R  +L  +P+    G   L
Sbjct:  387 IPEDSLLFVNVWSIGRNPKFWDNPLEFRPERFLKLEGDSSGVVDVRGSHFQLLPFGSGRRMCPGVSLAMQEVPALLGAIIQCFDFHVVGPKGEILKGDDIVINVDERPGLTAPRAHNLVCVPVDRTSGGGPL 518          
BLAST of CX296885 vs. ExPASy Swiss-Prot
Match: C82A1_PEA (Cytochrome P450 82A1 (Fragment) OS=Pisum sativum GN=CYP82A1 PE=2 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 1.307e-14
Identity = 42/91 (46.15%), Postives = 54/91 (59.34%), Query Frame = -1
Query:  329 RVIVNSWATGRDPMYWTEPESFIPERFID--HSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTE 595
            R++ N W   RDP  W +P  F PERF+     VD +G NFE +PFG+GRR+C GMS GL  V   LA  L+ FE   P+    E +D+TE
Sbjct:  429 RLMPNLWKIHRDPSVWPDPLEFKPERFLSTHKDVDVRGQNFELLPFGSGRRMCAGMSLGLHMVHYILANFLHSFEILNPS---PESIDVTE 516          
BLAST of CX296885 vs. ExPASy Swiss-Prot
Match: TCMO_ARATH (Trans-cinnamate 4-monooxygenase OS=Arabidopsis thaliana GN=CYP73A5 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.708e-14
Identity = 35/94 (37.23%), Postives = 55/94 (58.51%), Query Frame = -1
Query:  344 GPPLPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHS--VDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHED 619
            G  +PA+++++VN+W    +P  W +PE F PERF +    V+  G +F Y+PFG GRR CPG+   L  + +T+  ++ +FE   P G    D
Sbjct:  387 GYDIPAESKILVNAWWLANNPNSWKKPEEFRPERFFEEESHVEANGNDFRYVPFGVGRRSCPGIILALPILGITIGRMVQNFELLPPPGQSKVD 480          
BLAST of CX296885 vs. ExPASy Swiss-Prot
Match: THAD_ARATH (Cytochrome P450 705A5 OS=Arabidopsis thaliana GN=CYP705A5 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.230e-14
Identity = 42/117 (35.90%), Postives = 61/117 (52.14%), Query Frame = -1
Query:  275 LPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHSV-----DYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFGATVRRKQDLCMIPIP 610
            +P K R+ VN +A  RDP +W +PE F PERF+  S      + +    +YIPFG+GRR CPG       V   + M++ HF+W +    K E ++M E    T+     L   P+P
Sbjct:  394 IPEKTRLFVNVYAIMRDPDFWEDPEEFKPERFLASSRLGEEDEKREDMLKYIPFGSGRRACPGSHLAYTVVGSVIGMMVQHFDWII----KGEKINMKEGGTMTLTMAHPLKCTPVP 506          
BLAST of CX296885 vs. ExPASy Swiss-Prot
Match: C78A3_SOYBN (Cytochrome P450 78A3 OS=Glycine max GN=CYP78A3 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.230e-14
Identity = 41/97 (42.27%), Postives = 56/97 (57.73%), Query Frame = -1
Query:  341 GPPLPAKARVIVNSWATGRDPMYWTEPESFIPERFI----DHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDL 619
            G  +PA    +VN+WA  RDP  W +P  F+PERF+    D      G++    PFG+GRR CPG + G A+V   +A LL+ FEW +P+  K  DL
Sbjct:  405 GYHVPAGTTAMVNTWAICRDPHVWKDPLEFMPERFVTAGGDAEFSILGSDPRLAPFGSGRRACPGKTLGWATVNFWVASLLHEFEW-VPSDEKGVDL 500          
The following BLAST results are available for this feature:
BLAST of CX296885 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
TCMO_GLYEC5.869e-1539.36Trans-cinnamate 4-monooxygenase OS=Glycyrrhiza ech... [more]
C81F1_ARATH5.869e-1540.91Cytochrome P450 81F1 OS=Arabidopsis thaliana GN=CY... [more]
TCMO_RUTGR7.665e-1537.23Trans-cinnamate 4-monooxygenase OS=Ruta graveolens... [more]
TCMO_PETCR7.665e-1537.23Trans-cinnamate 4-monooxygenase OS=Petroselinum cr... [more]
TCMO_PEA7.665e-1538.30Trans-cinnamate 4-monooxygenase OS=Pisum sativum G... [more]
C93B1_GLYEC1.001e-1434.09Licodione synthase OS=Glycyrrhiza echinata GN=CYP9... [more]
C82A1_PEA1.307e-1446.15Cytochrome P450 82A1 (Fragment) OS=Pisum sativum G... [more]
TCMO_ARATH1.708e-1437.23Trans-cinnamate 4-monooxygenase OS=Arabidopsis tha... [more]
THAD_ARATH2.230e-1435.90Cytochrome P450 705A5 OS=Arabidopsis thaliana GN=C... [more]
C78A3_SOYBN2.230e-1442.27Cytochrome P450 78A3 OS=Glycine max GN=CYP78A3 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC05803H06SK FerrChloL1 Citrus clementina cDNA clone C05803H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296885 ID=CX296885; Name=CX296885; organism=Citrus clementina; type=EST; length=622bp
TTTATTATCAAATACACACATAATGTGTGGTGAATTATTTCTTATATACA
AGTGCTGAAGCTCAGCTTGATTACTGTTATTAGTCACTAAACTATTAACA
AACTATATTAAGCTGAACATAACAACTTTAACTAATCAATCACGTGTACA
CATAATTTCATAATCACCAGGCATGACGTGGCATGCCACATCATCAATGT
GTAACTGATTGATCCTGCTACTATCATCCTCTGCTCTGCTGACTACACTA
CAAGTGTGAGCTTCCTTAACAGTGTGGAATAGGAATCATGCACAGATCTT
GTTTTCTTCTTACTGTCGCGCCAAAGGCCTCTGTCATGTCCAAATCCTCA
TGCTTCATTCCATTTGGTAGTTTCCATTCGAAATGGTATAATAACATCGC
GAGTGTAAGCTCCACGCTGGCCAGACCAAATGACATTCCAGGGCATATCC
TCCTACCAGCACCAAATGGGATGTACTCAAAATTAGTCCCCTTGTAGTCA
ACAGAATGGTCAATGAATCTCTCGGGAATAAAGCTCTCAGGTTCAGTCCA
ATACATGGGATCTCTTCCAGTTGCCCATGAATTAACAATGACTCTGGCTT
TTGCAGGAAGGGGGGGCCCGGT
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