CX299917

Overview
NameCX299917
Unique NameCX299917
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length719
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX299917 vs. ExPASy Swiss-Prot
Match: ADH1_PETHY (Alcohol dehydrogenase 1 OS=Petunia hybrida GN=ADH1 PE=3 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 2.202e-54
Identity = 103/206 (50.00%), Postives = 138/206 (66.99%), Query Frame = 1
Query:    1 LLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWM 618
            +LSCG+STG+GA    A    GSTV IFGLG++GLA AEGAR+ GA+RIIGVD+   +F   K+FGVTEFVN K+ GDK V Q+I +MTDGG D   EC G  + +  A+ C   GWG  +++GV             +L+  + L G+ FG  K KSDIP ++ +YM KELEL+KF+TH++ F EIN AFD ++KG+ +RC+I M
Sbjct:  176 VLSCGISTGLGATLNVAKPTKGSTVAIFGLGAVGLAAAEGARIAGASRIIGVDLNPSRFNDAKKFGVTEFVNPKDHGDKPVQQVIAEMTDGGVDRSVECTGNVNAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNE-RTLKGTFFGNYKPKSDIPSVVDKYMKKELELEKFITHQVPFSEINKAFDYMLKGESIRCMITM 380          
BLAST of CX299917 vs. ExPASy Swiss-Prot
Match: ADHX_SPAAU (Alcohol dehydrogenase class-3 OS=Sparus aurata PE=2 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 4.153e-53
Identity = 96/204 (47.06%), Postives = 143/204 (70.10%), Query Frame = 1
Query:    1 LLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVI 612
            LL CG+STG GAA  TA VE GST  +FGLG++GLAV  G ++ GATRIIG+D+   KFE  K FG TEFVN K+   K + +++++MTDGG DY FEC+G   +++ A   C KGWG+++++GV   G ++S   F+++ +G++  G+ FGG K+   +P L++ YM K+L++D+FVTH + FE+IN  F+L+  GK +R V+
Sbjct:  173 LLGCGISTGYGAALNTAKVEPGSTCAVFGLGAVGLAVIMGCKVAGATRIIGIDLNPAKFETAKEFGATEFVNPKD-HSKPIQEVLVEMTDGGVDYSFECIGNVQIMRAALEACHKGWGESVIIGVAGAGQEISTRPFQLV-TGRVWKGTAFGGWKSVESVPKLVEDYMSKKLKVDEFVTHTLPFEKINEGFELMHAGKSIRTVL 374          
BLAST of CX299917 vs. ExPASy Swiss-Prot
Match: ADHX_DICDI (Alcohol dehydrogenase class-3 OS=Dictyostelium discoideum GN=adh5 PE=3 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 7.085e-53
Identity = 101/206 (49.03%), Postives = 150/206 (72.82%), Query Frame = 1
Query:    1 LLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN-SKNCGD-KSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVI 612
            LL CG++TG GAA  TA VE GSTV IFGLG++GL+VA+GA  CGA RIIG+D    KF  GK FG TEF+N SK+  + K++ Q ++D+TDGG DY FEC+G  ++++ A  CC KGWG + ++GV   G+++S   F+++ +G++  GS FGG+K++S +P ++ +YMDK+L++D++VT      EIN+AFD++ +GK LR V+
Sbjct:  173 LLGCGITTGFGAAKITAKVEEGSTVAIFGLGAVGLSVAQGAVDCGAKRIIGIDNNETKFGPGKDFGCTEFINPSKDLPEGKTIQQHLVDITDGGVDYSFECIGNVNVMRAALECCHKGWGVSTIVGVAPAGAEISTRPFQLV-TGRVWKGSAFGGVKSRSQLPSIIDKYMDKKLKVDEYVTFTYPLNEINTAFDVMHEGKSLRSVV 377          
BLAST of CX299917 vs. ExPASy Swiss-Prot
Match: ADHX_OCTVU (Alcohol dehydrogenase class-3 OS=Octopus vulgaris PE=1 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 2.692e-52
Identity = 98/205 (47.80%), Postives = 146/205 (71.22%), Query Frame = 1
Query:    1 LLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKN-CGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVI 612
            LL CG+STG GAA  TA VE GS   ++GLG++GLAVA G +  GA RIIG+D+   KFEIGK+FG+TEFVN K  C  KSV +++ +MTD G D+ FEC+G   +++ A   C KGWG ++++GV   G ++S   F+++ +G++  G+ FGG K++  +P L+  YM+K+L LD+FV+H++ F++IN AFDL+ KG+ +R V+
Sbjct:  173 LLGCGISTGYGAALNTAAVEKGSNCAVWGLGAVGLAVAMGCKAAGAARIIGIDINESKFEIGKKFGITEFVNPKKFC--KSVQKVLGEMTDVGVDFTFECIGNVGVMRAALESCHKGWGTSVIVGVAAHGEEISTRPFQLV-TGRVWKGTAFGGFKSRDSVPKLVDDYMNKKLLLDEFVSHKLSFKKINEAFDLMHKGESIRAVL 374          
BLAST of CX299917 vs. ExPASy Swiss-Prot
Match: ADH2_SOLLC (Alcohol dehydrogenase 2 OS=Solanum lycopersicum GN=ADH2 PE=2 SV=2)

HSP 1 Score: 204.912 bits (520), Expect = 3.516e-52
Identity = 101/208 (48.56%), Postives = 141/208 (67.79%), Query Frame = 1
Query:    1 LLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWMGE 624
            +LSCG+STG+GA+   A    GS+V IFGLG++GLA AEGAR+ GA+RIIGVD+ + +FE  K+FGVTEFVN K+   K V ++I +MTDGG D   EC G    +  A+ C   GWG  +++GV    +         L+  + L G+ FG  K +SDIP ++++YM+KELEL+KF+TH + F EIN AFDL++KG+ LRC+I M +
Sbjct:  175 VLSCGISTGLGASLNVAKPTKGSSVAIFGLGAVGLAAAEGARIAGASRIIGVDLNASRFEQAKKFGVTEFVNPKDY-SKPVQEVIAEMTDGGVDRSVECTGHIDAMISAFECVHDGWGVAVLVGVPHKEAVFKTHPLNFLNE-RTLKGTFFGNYKPRSDIPCVVEKYMNKELELEKFITHTLPFAEINKAFDLMLKGEGLRCIITMAD 380          
BLAST of CX299917 vs. ExPASy Swiss-Prot
Match: ADH1_SOLTU (Alcohol dehydrogenase 1 OS=Solanum tuberosum GN=ADH1 PE=2 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 5.998e-52
Identity = 101/206 (49.03%), Postives = 140/206 (67.96%), Query Frame = 1
Query:    1 LLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWM 618
            +LSCG+STG+GA    A    GS+V IFGLG++GLA AEGAR+ GA+RIIGVD+ + +FE  K+FGVTEFVN K+   K V ++I +MTDGG D   EC G    +  A+ C   GWG  +++GV    +        +L+  + L G+ FG  K +SDIP ++++YM+KELEL+KF+TH + F EIN AFDL++KG+ LRC+I M
Sbjct:  175 VLSCGISTGLGATLNVAKPTKGSSVAIFGLGAVGLAAAEGARIAGASRIIGVDLNASRFEQAKKFGVTEFVNPKDY-SKPVQEVIAEMTDGGVDRSVECTGHIDAMISAFECVHDGWGVAVLVGVPHKEAVFKTHPMNLLNE-RTLKGTFFGNYKPRSDIPSVVEKYMNKELELEKFITHTLPFAEINKAFDLMLKGEGLRCIITM 378          
BLAST of CX299917 vs. ExPASy Swiss-Prot
Match: ADH3_SOLTU (Alcohol dehydrogenase 3 OS=Solanum tuberosum GN=ADH3 PE=2 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 1.023e-51
Identity = 101/206 (49.03%), Postives = 139/206 (67.48%), Query Frame = 1
Query:    1 LLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWM 618
            +LSCG+STG+GA    A    GS+V IFGLG++GLA AEGAR+ GA+RIIGVD+ + +FE  K+FGVTEFVN K+   K V ++I +MTDGG D   EC G    +  A+ C   GWG  +++GV    +         L+  + L G+ FG  K +SDIP ++++YM+KELEL+KF+TH + F EIN AFDL++KG+ LRC+I M
Sbjct:  175 VLSCGISTGLGATLNVAKPTKGSSVAIFGLGAVGLAAAEGARIAGASRIIGVDLNASRFEQAKKFGVTEFVNPKDY-SKPVQEVIAEMTDGGVDRSVECTGHIDAMISAFECVHDGWGVAVLVGVPHKEAVFKTHPMNFLNE-RTLKGTFFGNYKPRSDIPSVVEKYMNKELELEKFITHTLPFAEINKAFDLMLKGEGLRCIITM 378          
BLAST of CX299917 vs. ExPASy Swiss-Prot
Match: ADH2_SOLTU (Alcohol dehydrogenase 2 OS=Solanum tuberosum GN=ADH2 PE=2 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 1.023e-51
Identity = 101/206 (49.03%), Postives = 139/206 (67.48%), Query Frame = 1
Query:    1 LLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWM 618
            +LSCG+STG+GA    A    GS+V IFGLG++GLA AEGAR+ GA+RIIGVD+ + +FE  K+FGVTEFVN K+   K V ++I +MTDGG D   EC G    +  A+ C   GWG  +++GV    +         L+  + L G+ FG  K +SDIP ++++YM+KELEL+KF+TH + F EIN AFDL++KG+ LRC+I M
Sbjct:  175 VLSCGISTGLGATLNVAKPTKGSSVAIFGLGAVGLAAAEGARIAGASRIIGVDLNASRFEQAKKFGVTEFVNPKDY-SKPVQEVIAEMTDGGVDRSVECTGHIDAMISAFECVHDGWGVAVLVGVPHKEAVFKTHPMNFLNE-RTLKGTFFGNYKPRSDIPSVVEKYMNKELELEKFITHTLPFAEINKAFDLMLKGEGLRCIITM 378          
BLAST of CX299917 vs. ExPASy Swiss-Prot
Match: ADH2_MAIZE (Alcohol dehydrogenase 2 OS=Zea mays GN=ADH2 PE=2 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.336e-51
Identity = 100/206 (48.54%), Postives = 138/206 (66.99%), Query Frame = 1
Query:    1 LLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWM 618
            +LSCG+STG+GA    A    GSTV IFGLG++GLA  EGARL GA+RIIGVD+   K+E  K+FG TEFVN K+  DK V +++I++T+GG D   EC G  + +  A+ C   GWG  +++GV     Q        L S K L G+ FG  K ++D+P +++ YM KELEL+KF+TH + F EIN+AFDL++KG+ LRC++ M
Sbjct:  174 ILSCGISTGLGATLNVAKPAKGSTVAIFGLGAVGLAAMEGARLAGASRIIGVDINPAKYEQAKKFGCTEFVNPKD-HDKPVQEVLIELTNGGVDRSVECTGNVNAMISAFECVHDGWGVAVLVGVPHKDDQFKTHPMNFL-SEKTLKGTFFGNYKPRTDLPNVVEMYMKKELELEKFITHSVPFSEINTAFDLMLKGESLRCIMRM 377          
BLAST of CX299917 vs. ExPASy Swiss-Prot
Match: ADHX_DROME (Alcohol dehydrogenase class-3 OS=Drosophila melanogaster GN=Fdh PE=1 SV=3)

HSP 1 Score: 202.216 bits (513), Expect = 2.279e-51
Identity = 95/205 (46.34%), Postives = 142/205 (69.27%), Query Frame = 1
Query:    1 LLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDK-SVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVI 612
            LL CG+STG GAA  TA VE GST  ++GLG++GLAV  G +  GA +I G+D+  +KFE+ K+FG T+FVN K+  DK S+   +ID+TDGG DY FEC+G  + ++ A     KGWG ++V+GV   G ++S   F+++  G++  GS FGG ++ SD+P L++ Y+ K+L +D+F+THE+   +IN AFDL+ KG+ +R +I
Sbjct:  174 LLGCGISTGYGAALNTAKVEAGSTCAVWGLGAVGLAVGLGCKKAGAGKIYGIDINPDKFELAKKFGFTDFVNPKDVADKGSIQNYLIDLTDGGFDYTFECIGNVNTMRSALEATHKGWGTSVVIGVAGAGQEISTRPFQLV-VGRVWKGSAFGGWRSVSDVPKLVEDYLKKDLLVDEFITHELPLSQINEAFDLMHKGESIRSII 377          
The following BLAST results are available for this feature:
BLAST of CX299917 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 119
Match NameE-valueIdentityDescription
ADH1_PETHY2.202e-5450.00Alcohol dehydrogenase 1 OS=Petunia hybrida GN=ADH1... [more]
ADHX_SPAAU4.153e-5347.06Alcohol dehydrogenase class-3 OS=Sparus aurata PE=... [more]
ADHX_DICDI7.085e-5349.03Alcohol dehydrogenase class-3 OS=Dictyostelium dis... [more]
ADHX_OCTVU2.692e-5247.80Alcohol dehydrogenase class-3 OS=Octopus vulgaris ... [more]
ADH2_SOLLC3.516e-5248.56Alcohol dehydrogenase 2 OS=Solanum lycopersicum GN... [more]
ADH1_SOLTU5.998e-5249.03Alcohol dehydrogenase 1 OS=Solanum tuberosum GN=AD... [more]
ADH3_SOLTU1.023e-5149.03Alcohol dehydrogenase 3 OS=Solanum tuberosum GN=AD... [more]
ADH2_SOLTU1.023e-5149.03Alcohol dehydrogenase 2 OS=Solanum tuberosum GN=AD... [more]
ADH2_MAIZE1.336e-5148.54Alcohol dehydrogenase 2 OS=Zea mays GN=ADH2 PE=2 S... [more]
ADHX_DROME2.279e-5146.34Alcohol dehydrogenase class-3 OS=Drosophila melano... [more]

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Properties
Property NameValue
Genbank descriptionC07004A03SK SaltLeaf1 Citrus clementina cDNA clone C07004A03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX299917 ID=CX299917; Name=CX299917; organism=Citrus clementina; type=EST; length=719bp
CTTCTAAGCTGTGGAGTATCAACAGGCGTGGGAGCTGCTTGGAGAACAGC
AAATGTAGAGGTTGGATCAACTGTTGTTATATTTGGGCTTGGTTCAATTG
GATTAGCGGTTGCAGAGGGAGCGAGATTATGTGGTGCTACAAGGATTATA
GGCGTGGATGTGATCTCGGAAAAATTTGAAATTGGAAAAAGGTTTGGAGT
TACAGAGTTTGTGAATTCTAAAAACTGTGGGGATAAATCTGTAAGCCAGA
TAATCATTGACATGACTGATGGGGGTGCTGATTACTGCTTTGAATGTGTT
GGTTTGGCATCCTTGGTGCAAGAAGCATATGCTTGTTGCCGAAAGGGTTG
GGGGAAAACAATTGTGTTGGGAGTGGACCAGCCGGGGTCACAGTTGAGCC
TGAGCTCTTTTGAGGTCCTTCACAGTGGAAAAATTCTGATGGGATCATTG
TTTGGAGGTCTCAAAGCTAAATCTGATATTCCTATTCTTTTGAAACGTTA
CATGGATAAGGAACTAGAGCTGGATAAGTTTGTCACTCATGAGATGAAGT
TTGAAGAAATCAATAGCGCGTTTGATTTACTTATAAAAGGAAAGTGTCTC
CGTTGTGTGATATGGATGGGCGAATAAGATTTCTTGCATTATTTTCTTGT
ATGTACTTTCTCCAATATTACCTCTCATATCTAAGCAATTGACCACCATT
TGTGATGGACATGTGTATA
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