CX299917

Overview
NameCX299917
Unique NameCX299917
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length719
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX299917 vs. ExPASy Swiss-Prot
Match: ADH1_STRCA (Alcohol dehydrogenase 1 OS=Struthio camelus GN=ADH1 PE=1 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.253e-41
Identity = 87/204 (42.65%), Postives = 125/204 (61.27%), Query Frame = 1
Query:    1 LLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVI 612
            L+ CG STG GAA +TA VE GST  +FGLG +GL+V  G +  GA+RIIGVD+  +KF   K  G T+ VN K+   K + +++++MT  G DY FE +G    +  A A C   +G ++++GV     +LS     +L SG+   GS+FGG K+K  +P L+  YM+K+  LD  +TH + F +IN  FDLL  GK +R V+
Sbjct:  171 LIGCGFSTGYGAALQTAKVEPGSTCAVFGLGGVGLSVVMGCKAAGASRIIGVDINKDKFAKAKELGATDCVNPKDF-TKPIHEVLMEMTGLGVDYSFEVIGHTETMAAALASCHFNYGVSVIVGVPPAAEKLSFDPM-LLFSGRTWKGSVFGGWKSKDSVPKLVADYMEKKFVLDPLITHTLPFHKINEGFDLLRTGKSIRSVL 372          
BLAST of CX299917 vs. ExPASy Swiss-Prot
Match: ADH1_RANPE (Alcohol dehydrogenase 1 OS=Rana perezi PE=1 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.253e-41
Identity = 83/204 (40.69%), Postives = 131/204 (64.22%), Query Frame = 1
Query:    1 LLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVI 612
            L+ CG STG G+A  T  V+ GST  +FGLG +GL+V  G ++ GA+RIIGVD+ S+KF   K  G TE +N K+  +  + +++  MTD G DY FE +G  +++  A +    G GKT+++G+    + +S     +L +G+IL G++FGG K+K D+P L++ Y++K+ + D  +TH M FE+IN  F+LL  GK +R ++
Sbjct:  172 LIGCGFSTGYGSAVNTGKVKPGSTCAVFGLGGVGLSVIIGCKVAGASRIIGVDLNSDKFTTAKECGATECINPKDY-NIPIHEVLAKMTDDGVDYAFEVIGNTTVMTSALSSSHFGCGKTVIVGLAPSSAVMSFDPLLIL-TGRILTGAVFGGWKSKDDVPKLVRDYLNKKFDFDPLITHYMPFEKINEGFELLRNGKSIRTIL 373          
BLAST of CX299917 vs. ExPASy Swiss-Prot
Match: ADH6_HUMAN (Alcohol dehydrogenase 6 OS=Homo sapiens GN=ADH6 PE=2 SV=2)

HSP 1 Score: 168.318 bits (425), Expect = 3.647e-41
Identity = 86/198 (43.43%), Postives = 124/198 (62.63%), Query Frame = 1
Query:    1 LLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGK 594
            L+SCG STG GAA  TA V  GST  +FGLG +GL+V  G +  GA RIIGVDV  EKF+  +  G TE +N ++   K + +++ DMTD G D+CFE +G   ++  A A C + +G  +V+GV     QL +S  ++  SG+ L GS+FGG K++  IP L+  YM ++L LD  +TH +  ++IN A +L+  GK
Sbjct:  172 LISCGFSTGFGAAINTAKVTPGSTCAVFGLGGVGLSVVMGCKAAGAARIIGVDVNKEKFKKAQELGATECLNPQDL-KKPIQEVLFDMTDAGIDFCFEAIGNLDVLAAALASCNESYGVCVVVGVLPASVQLKISG-QLFFSGRSLKGSVFGGWKSRQHIPKLVADYMAEKLNLDPLITHTLNLDKINEAVELMKTGK 367          
BLAST of CX299917 vs. ExPASy Swiss-Prot
Match: FADH_PICPA (S-(hydroxymethyl)glutathione dehydrogenase OS=Pichia pastoris GN=FLD1 PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 6.221e-41
Identity = 81/207 (39.13%), Postives = 129/207 (62.32%), Query Frame = 1
Query:    1 LLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGD-KSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWM 618
            LL CGV+TG GAA  TA +  G  + +FG G IGL+V +GA   GA+ II +D+   K     +FG T+FVN     +  ++   +ID+TDGG DY F+C G   +++ A   C KGWG++I++GV   G ++S   F+++ +G++  G  FGG+K ++ +P L++ Y+D ++++D+F+TH    + IN AF  +  G C+R VI M
Sbjct:  173 LLGCGVTTGYGAAINTAKISKGDKIGVFGAGCIGLSVIQGAVSKGASEIIVIDINDSKKAWADQFGATKFVNPTTLPEGTNIVDYLIDITDGGFDYTFDCTGNVQVMRNALESCHKGWGESIIIGVAAAGKEISTRPFQLV-TGRVWRGCAFGGIKGRTQMPSLVQDYLDGKIKVDEFITHRHDLDNINKAFHDMHAGNCIRAVITM 378          
BLAST of CX299917 vs. ExPASy Swiss-Prot
Match: ADH1S_HORSE (Alcohol dehydrogenase S chain OS=Equus caballus PE=1 SV=3)

HSP 1 Score: 166.777 bits (421), Expect = 1.061e-40
Identity = 81/204 (39.71%), Postives = 127/204 (62.25%), Query Frame = 1
Query:    1 LLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVI 612
            L+ CG STG G+A + A V  GST  +FGLG +GL+V  G +  GA RIIGVD+  +KF   K  G TE VN ++   K + +++ +M++GG D+ FE +G    +  A +CC++ +G ++++GV      LS++   +L SG+   G++FGG K+K  +P L+  +M K+  LD  +TH + FE+IN  FDLL  GK +R ++
Sbjct:  171 LVGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDY-KKPIQEVLTEMSNGGVDFSFEVIGRLDTMVAALSCCQEAYGVSVIVGVPPDSQNLSMNPM-LLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGKSIRTIL 372          
BLAST of CX299917 vs. ExPASy Swiss-Prot
Match: ADH1B_UROHA (Alcohol dehydrogenase 1B OS=Uromastyx hardwickii PE=1 SV=2)

HSP 1 Score: 166.777 bits (421), Expect = 1.061e-40
Identity = 85/205 (41.46%), Postives = 125/205 (60.98%), Query Frame = 1
Query:    1 LLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVI 612
            L+ CG STG GAA  +A V+ GST  +FGLG +GL+   G +  GA+RIIG+D+  EKF   K  G TE VN  +   K +++++ DMTDG G +Y FE +G    +  A A C   +G ++++GV    SQ++     +L +G+   GS+FGG K+K  +P L+  +M K+  LD  +TH M FE+IN  F+LL  GK +R V+
Sbjct:  171 LIGCGFSTGYGAAINSAKVQPGSTCAVFGLGGVGLSAVMGCKAAGASRIIGIDINKEKFPKAKELGATECVNPLDY-KKPINEVLFDMTDGEGVEYSFEVIGRTDTMTAALASCHNNYGTSVIVGVPPSASQIAFDPL-LLFTGRTWKGSVFGGWKSKDAVPRLVSDFMGKKFILDPLITHTMPFEKINEGFELLRSGKSIRTVL 373          
BLAST of CX299917 vs. ExPASy Swiss-Prot
Match: FADH_CANMA (S-(hydroxymethyl)glutathione dehydrogenase OS=Candida maltosa GN=FDH1 PE=3 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.386e-40
Identity = 80/205 (39.02%), Postives = 130/205 (63.41%), Query Frame = 1
Query:    1 LLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN-SKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVI 612
            LL CG++TG GAA  TANV+ G  V +FG G +GL+V +G    GA +II VD+  +K E G++ G T FVN +K     ++   +I+MTDGG D+ F+C G   +++ A   C KGWG ++++GV   G ++S   F+++ +G+   G+ FGG+K +S +P ++  Y+D +L++++F+TH      IN AF+ +  G C+R V+
Sbjct:  175 LLGCGITTGYGAATITANVQKGDNVAVFGGGIVGLSVIQGCAERGAAQIILVDISDKKEEWGQKLGATAFVNPTKLPEGTTIVDKLIEMTDGGCDFTFDCTGNVGVMRNALEACHKGWGTSVIIGVAAAGKEISTRPFQLV-TGRTWKGAAFGGVKGRSQLPGIVNNYLDGKLKVEEFITHREPLAAINKAFEEMHAGDCIRAVV 378          
BLAST of CX299917 vs. ExPASy Swiss-Prot
Match: ADH1_APTAU (Alcohol dehydrogenase 1 OS=Apteryx australis GN=ADH1 PE=1 SV=2)

HSP 1 Score: 166.007 bits (419), Expect = 1.810e-40
Identity = 85/204 (41.67%), Postives = 125/204 (61.27%), Query Frame = 1
Query:    1 LLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVI 612
            L+ CG STG GAA +TA VE GST  +FGLG +GL+V  G +  GA+RII +D+  +KF   K  G T+ VN K+   K + +++++MT  G DY FE +G    +  A A C   +G +++LGV     ++S     +L SG+   GS+FGG K+K  +P L+  YM+K+  L+  +TH + F +IN  FDLL KGK +R V+
Sbjct:  172 LIGCGFSTGYGAAVQTAKVEPGSTCAVFGLGGVGLSVVMGCKAAGASRIIAIDINKDKFAKAKELGATDCVNPKDF-TKPIHEVLMEMTGLGVDYSFEVIGHTETMAAALASCHFNYGVSVILGVPPAAEKISFDPM-LLFSGRTWKGSVFGGWKSKDAVPKLVADYMEKKFVLEPLITHTLPFIKINEGFDLLRKGKSIRSVL 373          
BLAST of CX299917 vs. ExPASy Swiss-Prot
Match: ADH1_COTJA (Alcohol dehydrogenase 1 OS=Coturnix coturnix japonica GN=ADH1 PE=1 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.364e-40
Identity = 84/204 (41.18%), Postives = 122/204 (59.80%), Query Frame = 1
Query:    1 LLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVI 612
            L+ CG STG GA  +TA VE GST  +FGLG +GL+V  G +  GA+RII +D+  +KF   K  G TE VN K+   K + +++ +MT  G DY FE +G    + EA A C   +G ++++GV     ++S     ++ SG+   GS+FGG K+K  +P L+  YM K+  LD  +TH + F +IN  FDLL  GK +R V+
Sbjct:  172 LIGCGFSTGYGAVLQTAKVEPGSTCAVFGLGGVGLSVVMGCKAAGASRIIAIDINKDKFAKAKELGATECVNPKDF-KKPIHEVLTEMTGKGVDYSFEVIGRIETMTEALASCHYNYGVSVIVGVPPAAQKISFDPM-LIFSGRTWKGSVFGGWKSKDAVPKLVADYMKKKFVLDPLITHTLPFTKINEGFDLLRTGKSIRTVL 373          
BLAST of CX299917 vs. ExPASy Swiss-Prot
Match: ADH1E_HORSE (Alcohol dehydrogenase E chain OS=Equus caballus PE=1 SV=2)

HSP 1 Score: 165.622 bits (418), Expect = 2.364e-40
Identity = 80/204 (39.22%), Postives = 127/204 (62.25%), Query Frame = 1
Query:    1 LLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVI 612
            L+ CG STG G+A + A V  GST  +FGLG +GL+V  G +  GA RIIGVD+  +KF   K  G TE VN ++   K + +++ +M++GG D+ FE +G    +  A +CC++ +G ++++GV      LS++   +L SG+   G++FGG K+K  +P L+  +M K+  LD  +TH + FE+IN  FDLL  G+ +R ++
Sbjct:  172 LIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDY-KKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPM-LLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGESIRTIL 373          
The following BLAST results are available for this feature:
BLAST of CX299917 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 119
Match NameE-valueIdentityDescription
ADH1_STRCA1.253e-4142.65Alcohol dehydrogenase 1 OS=Struthio camelus GN=ADH... [more]
ADH1_RANPE1.253e-4140.69Alcohol dehydrogenase 1 OS=Rana perezi PE=1 SV=1[more]
ADH6_HUMAN3.647e-4143.43Alcohol dehydrogenase 6 OS=Homo sapiens GN=ADH6 PE... [more]
FADH_PICPA6.221e-4139.13S-(hydroxymethyl)glutathione dehydrogenase OS=Pich... [more]
ADH1S_HORSE1.061e-4039.71Alcohol dehydrogenase S chain OS=Equus caballus PE... [more]
ADH1B_UROHA1.061e-4041.46Alcohol dehydrogenase 1B OS=Uromastyx hardwickii P... [more]
FADH_CANMA1.386e-4039.02S-(hydroxymethyl)glutathione dehydrogenase OS=Cand... [more]
ADH1_APTAU1.810e-4041.67Alcohol dehydrogenase 1 OS=Apteryx australis GN=AD... [more]
ADH1_COTJA2.364e-4041.18Alcohol dehydrogenase 1 OS=Coturnix coturnix japon... [more]
ADH1E_HORSE2.364e-4039.22Alcohol dehydrogenase E chain OS=Equus caballus PE... [more]

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Properties
Property NameValue
Genbank descriptionC07004A03SK SaltLeaf1 Citrus clementina cDNA clone C07004A03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX299917 ID=CX299917; Name=CX299917; organism=Citrus clementina; type=EST; length=719bp
CTTCTAAGCTGTGGAGTATCAACAGGCGTGGGAGCTGCTTGGAGAACAGC
AAATGTAGAGGTTGGATCAACTGTTGTTATATTTGGGCTTGGTTCAATTG
GATTAGCGGTTGCAGAGGGAGCGAGATTATGTGGTGCTACAAGGATTATA
GGCGTGGATGTGATCTCGGAAAAATTTGAAATTGGAAAAAGGTTTGGAGT
TACAGAGTTTGTGAATTCTAAAAACTGTGGGGATAAATCTGTAAGCCAGA
TAATCATTGACATGACTGATGGGGGTGCTGATTACTGCTTTGAATGTGTT
GGTTTGGCATCCTTGGTGCAAGAAGCATATGCTTGTTGCCGAAAGGGTTG
GGGGAAAACAATTGTGTTGGGAGTGGACCAGCCGGGGTCACAGTTGAGCC
TGAGCTCTTTTGAGGTCCTTCACAGTGGAAAAATTCTGATGGGATCATTG
TTTGGAGGTCTCAAAGCTAAATCTGATATTCCTATTCTTTTGAAACGTTA
CATGGATAAGGAACTAGAGCTGGATAAGTTTGTCACTCATGAGATGAAGT
TTGAAGAAATCAATAGCGCGTTTGATTTACTTATAAAAGGAAAGTGTCTC
CGTTGTGTGATATGGATGGGCGAATAAGATTTCTTGCATTATTTTCTTGT
ATGTACTTTCTCCAATATTACCTCTCATATCTAAGCAATTGACCACCATT
TGTGATGGACATGTGTATA
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