CX299917

Overview
NameCX299917
Unique NameCX299917
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length719
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX299917 vs. ExPASy Swiss-Prot
Match: ADH1_CHICK (Alcohol dehydrogenase 1 OS=Gallus gallus GN=ADH1 PE=1 SV=2)

HSP 1 Score: 164.851 bits (416), Expect = 4.032e-40
Identity = 83/204 (40.69%), Postives = 121/204 (59.31%), Query Frame = 1
Query:    1 LLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVI 612
            L+ CG STG GA  +TA VE GST  +FGLG +GL+V  G +  GA+RII VD+  +KF   K  G TE +N K+   K + +++ +MT  G DY FE +G    +  A A C   +G ++++GV     ++S     ++ SG+   GS+FGG K+K  +P L+  YM K+  LD  +TH + F +IN  FDLL  GK +R V+
Sbjct:  173 LIGCGFSTGYGAVLQTAKVEAGSTCAVFGLGGVGLSVVMGCKAAGASRIIAVDINKDKFAKAKELGATECINPKDF-KKPIHEVLTEMTGQGVDYSFEVIGRIETMTAALASCHNNYGVSVIVGVPPAAQKISFDPM-LIFSGRTWKGSVFGGWKSKDAVPKLVADYMKKKFVLDPLITHTLPFTKINEGFDLLRTGKSIRSVL 374          
BLAST of CX299917 vs. ExPASy Swiss-Prot
Match: ADH1A_UROHA (Alcohol dehydrogenase 1A OS=Uromastyx hardwickii PE=1 SV=2)

HSP 1 Score: 164.466 bits (415), Expect = 5.266e-40
Identity = 84/205 (40.98%), Postives = 125/205 (60.98%), Query Frame = 1
Query:    1 LLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVI 612
            L+ CG STG GAA  TA VE GST  +FGLG +GL+   G +  GA+RIIGVD+  +KF   K  G TE VN  +   K +++++ D+T G G DY FE +G    +  A A C   +G +I++G+    S+++ S   ++ +G+   GS+FGG K+K  +P L+  +M K+  LD  +TH M F++IN  F+LL  GK +R V+
Sbjct:  171 LIGCGFSTGYGAAVETAKVEPGSTCAVFGLGGVGLSAVMGCKAAGASRIIGVDINKDKFPKAKEMGATECVNPLDY-KKPINEVLFDLTGGEGVDYSFEVIGRTDTMTAALASCHMDYGTSIIVGLPPSASEITFSP-GLIFTGRTWKGSVFGGWKSKDSVPRLVSDFMQKKFSLDPLITHTMPFDKINEGFELLRAGKSIRSVL 373          
BLAST of CX299917 vs. ExPASy Swiss-Prot
Match: ADH1A_MACMU (Alcohol dehydrogenase 1A OS=Macaca mulatta GN=ADH1A PE=2 SV=2)

HSP 1 Score: 164.081 bits (414), Expect = 6.878e-40
Identity = 79/204 (38.73%), Postives = 123/204 (60.29%), Query Frame = 1
Query:    1 LLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVI 612
            L+ CG STG G+A + A V  GST  +FGLG +GL+   G +  GA RII VD+  +KF   K  G TE +N ++   K + +++ +MTDGG D+ FE +G    +  +  CC +  G ++++GV      LS++   +L +G+   G+++GG K+K DIP L+  +M K+  LD  +TH + FE+IN  FDLL  GK +R ++
Sbjct:  172 LIGCGFSTGYGSAVKVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDY-KKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPDSQNLSINPM-LLLTGRTWKGAVYGGFKSKEDIPKLVADFMAKKFSLDALITHVLPFEKINEGFDLLRSGKSIRTIL 373          
BLAST of CX299917 vs. ExPASy Swiss-Prot
Match: ADH1_NAJNA (Alcohol dehydrogenase 1 OS=Naja naja PE=1 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.532e-39
Identity = 83/205 (40.49%), Postives = 124/205 (60.49%), Query Frame = 1
Query:    1 LLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVI 612
            L+ CG STG GAA +TA VE GS   +FGLG +GL+V  G +  GA+RIIGVD+  +KF   K  G TE +N  +   K +++++ D+T G G DY FE +G    +  A+  C +  G ++V+GV    S ++ +   +L +G+   G +FGG K+K  +P L+  +M K+  LD  +TH + FE+IN  FDLL  GK +R V+
Sbjct:  171 LIGCGFSTGYGAAMQTAKVEPGSICAVFGLGGVGLSVVMGCKAAGASRIIGVDINKDKFAKAKEMGATECINPLDF-KKPINEVLFDLTGGEGVDYSFEVIGRTETMISAFTSCHQNLGTSVVVGVPPNASMITYNPL-MLFTGRTWKGCVFGGWKSKDSVPKLVSDFMQKKFVLDPLITHTLPFEKINEGFDLLRSGKSIRTVL 373          
BLAST of CX299917 vs. ExPASy Swiss-Prot
Match: ADH1G_HUMAN (Alcohol dehydrogenase 1C OS=Homo sapiens GN=ADH1C PE=1 SV=2)

HSP 1 Score: 161.77 bits (408), Expect = 3.414e-39
Identity = 79/204 (38.73%), Postives = 123/204 (60.29%), Query Frame = 1
Query:    1 LLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVI 612
            L+ CG STG G+A + A V  GST  +FGLG +GL+V  G +  GA RII VD+  +KF   K  G TE +N ++   K + +++ +MTDGG D+ FE +G    +  +  CC +  G ++++GV      LS++   +L +G+   G++FGG K+K  +P L+  +M K+  LD  +T+ + FE+IN  FDLL  GK +R V+
Sbjct:  172 LIGCGFSTGYGSAVKVAKVTPGSTCAVFGLGGVGLSVVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDY-KKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPDSQNLSINPM-LLLTGRTWKGAIFGGFKSKESVPKLVADFMAKKFSLDALITNILPFEKINEGFDLLRSGKSIRTVL 373          
BLAST of CX299917 vs. ExPASy Swiss-Prot
Match: ADH1B_PANTR (Alcohol dehydrogenase 1B OS=Pan troglodytes GN=ADH1B PE=2 SV=3)

HSP 1 Score: 160.999 bits (406), Expect = 5.823e-39
Identity = 79/204 (38.73%), Postives = 121/204 (59.31%), Query Frame = 1
Query:    1 LLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVI 612
            L+ CG STG G+A   A V  GST  +FGLG +GL+   G +  GA RII VD+  +KF   K  G TE +N ++   K + +++ +MTDGG D+ FE +G    +  +  CC +  G ++++GV      LS++   +L +G+   G+++GG K+K  IP L+  +M K+  LD  +TH + FE+IN  FDLL  GK +R V+
Sbjct:  172 LIGCGFSTGYGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDY-KKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQNLSINPM-LLLTGRTWKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPFEKINEGFDLLHSGKSIRTVL 373          
BLAST of CX299917 vs. ExPASy Swiss-Prot
Match: ADH1B_HUMAN (Alcohol dehydrogenase 1B OS=Homo sapiens GN=ADH1B PE=1 SV=2)

HSP 1 Score: 160.999 bits (406), Expect = 5.823e-39
Identity = 79/204 (38.73%), Postives = 121/204 (59.31%), Query Frame = 1
Query:    1 LLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVI 612
            L+ CG STG G+A   A V  GST  +FGLG +GL+   G +  GA RII VD+  +KF   K  G TE +N ++   K + +++ +MTDGG D+ FE +G    +  +  CC +  G ++++GV      LS++   +L +G+   G+++GG K+K  IP L+  +M K+  LD  +TH + FE+IN  FDLL  GK +R V+
Sbjct:  172 LIGCGFSTGYGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDY-KKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQNLSINPM-LLLTGRTWKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPFEKINEGFDLLHSGKSIRTVL 373          
BLAST of CX299917 vs. ExPASy Swiss-Prot
Match: ADH1_MOUSE (Alcohol dehydrogenase 1 OS=Mus musculus GN=Adh1 PE=2 SV=2)

HSP 1 Score: 160.614 bits (405), Expect = 7.605e-39
Identity = 82/204 (40.20%), Postives = 121/204 (59.31%), Query Frame = 1
Query:    1 LLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVI 612
            L+ CG STG G+A + A V  GST  +FGLG +GL+V  G +  GA RII VD+  +KF   K  G TE +N ++   K + +++ +MTDGG D+ FE +G    +  A   C    G ++V+GV      LS++   +L  G+   G++FGG K+K  +P L+  +M K+  LD  +TH + FE+IN AFDLL  GK +R V+
Sbjct:  172 LIGCGFSTGYGSAVKVAKVTPGSTCAVFGLGGVGLSVIIGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDY-SKPIQEVLQEMTDGGVDFSFEVIGRLDTMTSALLSCHAACGVSVVVGVPPNAQNLSMNPM-LLLLGRTWKGAIFGGFKSKDSVPKLVADFMAKKFPLDPLITHVLPFEKINEAFDLLRSGKSIRTVL 373          
BLAST of CX299917 vs. ExPASy Swiss-Prot
Match: ADH1A_PONAB (Alcohol dehydrogenase 1A OS=Pongo abelii GN=ADH1A PE=2 SV=3)

HSP 1 Score: 160.614 bits (405), Expect = 7.605e-39
Identity = 78/204 (38.24%), Postives = 122/204 (59.80%), Query Frame = 1
Query:    1 LLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVI 612
            L+ CG STG G+A   A V  GST  +FGLG +GL+V  G +  GA RII VD+  +KF   K  G TE +N ++  +K + +++ +MTDGG D+ FE +G    +  +  CC +  G ++++GV      LS++   +L +G+   G++ GG K+K  +P L+  +M K+  LD  +TH + FE+IN  FDLL  GK +R ++
Sbjct:  172 LIGCGFSTGYGSAVNVAKVTPGSTCAVFGLGGVGLSVVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDY-NKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPDSQNLSMNPM-LLLTGRTWKGAVLGGFKSKECVPKLVADFMAKKFSLDALITHVLPFEKINDGFDLLHSGKSIRTIL 373          
BLAST of CX299917 vs. ExPASy Swiss-Prot
Match: ADH1G_PAPHA (Alcohol dehydrogenase 1C OS=Papio hamadryas GN=ADH1C PE=2 SV=3)

HSP 1 Score: 160.229 bits (404), Expect = 9.932e-39
Identity = 77/204 (37.75%), Postives = 121/204 (59.31%), Query Frame = 1
Query:    1 LLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVI 612
            L+ CG STG G A + A V  GST  +FGLG +GL+   G +  GA RII VD+  +KF   K  G TE +N ++   K + +++ +MTDGG D+ FE +G    +  +  CC +  G ++++GV      LS++   +L +G+   G++FGG K+K  +P L+  +M K+  LD  +T+ + FE+IN  FDLL  GK +R ++
Sbjct:  172 LIGCGFSTGYGPAVKVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDY-KKPIQEVLKEMTDGGVDFSFEVIGRLDTIMASLLCCHEACGTSVIVGVPPDSQNLSINPV-LLLTGRTWKGAIFGGFKSKESVPKLVSDFMAKKFSLDALITNVLPFEKINEGFDLLRSGKSIRTIL 373          
The following BLAST results are available for this feature:
BLAST of CX299917 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 119
Match NameE-valueIdentityDescription
ADH1_CHICK4.032e-4040.69Alcohol dehydrogenase 1 OS=Gallus gallus GN=ADH1 P... [more]
ADH1A_UROHA5.266e-4040.98Alcohol dehydrogenase 1A OS=Uromastyx hardwickii P... [more]
ADH1A_MACMU6.878e-4038.73Alcohol dehydrogenase 1A OS=Macaca mulatta GN=ADH1... [more]
ADH1_NAJNA1.532e-3940.49Alcohol dehydrogenase 1 OS=Naja naja PE=1 SV=1[more]
ADH1G_HUMAN3.414e-3938.73Alcohol dehydrogenase 1C OS=Homo sapiens GN=ADH1C ... [more]
ADH1B_PANTR5.823e-3938.73Alcohol dehydrogenase 1B OS=Pan troglodytes GN=ADH... [more]
ADH1B_HUMAN5.823e-3938.73Alcohol dehydrogenase 1B OS=Homo sapiens GN=ADH1B ... [more]
ADH1_MOUSE7.605e-3940.20Alcohol dehydrogenase 1 OS=Mus musculus GN=Adh1 PE... [more]
ADH1A_PONAB7.605e-3938.24Alcohol dehydrogenase 1A OS=Pongo abelii GN=ADH1A ... [more]
ADH1G_PAPHA9.932e-3937.75Alcohol dehydrogenase 1C OS=Papio hamadryas GN=ADH... [more]

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Properties
Property NameValue
Genbank descriptionC07004A03SK SaltLeaf1 Citrus clementina cDNA clone C07004A03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX299917 ID=CX299917; Name=CX299917; organism=Citrus clementina; type=EST; length=719bp
CTTCTAAGCTGTGGAGTATCAACAGGCGTGGGAGCTGCTTGGAGAACAGC
AAATGTAGAGGTTGGATCAACTGTTGTTATATTTGGGCTTGGTTCAATTG
GATTAGCGGTTGCAGAGGGAGCGAGATTATGTGGTGCTACAAGGATTATA
GGCGTGGATGTGATCTCGGAAAAATTTGAAATTGGAAAAAGGTTTGGAGT
TACAGAGTTTGTGAATTCTAAAAACTGTGGGGATAAATCTGTAAGCCAGA
TAATCATTGACATGACTGATGGGGGTGCTGATTACTGCTTTGAATGTGTT
GGTTTGGCATCCTTGGTGCAAGAAGCATATGCTTGTTGCCGAAAGGGTTG
GGGGAAAACAATTGTGTTGGGAGTGGACCAGCCGGGGTCACAGTTGAGCC
TGAGCTCTTTTGAGGTCCTTCACAGTGGAAAAATTCTGATGGGATCATTG
TTTGGAGGTCTCAAAGCTAAATCTGATATTCCTATTCTTTTGAAACGTTA
CATGGATAAGGAACTAGAGCTGGATAAGTTTGTCACTCATGAGATGAAGT
TTGAAGAAATCAATAGCGCGTTTGATTTACTTATAAAAGGAAAGTGTCTC
CGTTGTGTGATATGGATGGGCGAATAAGATTTCTTGCATTATTTTCTTGT
ATGTACTTTCTCCAATATTACCTCTCATATCTAAGCAATTGACCACCATT
TGTGATGGACATGTGTATA
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