CX299919
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299919 vs. ExPASy Swiss-Prot
Match: PROF3_WHEAT (Profilin-3 OS=Triticum aestivum GN=PRO3 PE=2 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 3.900e-48 Identity = 88/106 (83.02%), Postives = 95/106 (89.62%), Query Frame = 1 Query: 1 IIGHDGSVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQG 318 I+GHDGSVWAQS NFPQ KPEE GI+ DF EPG LAPTGL+LGGTKYMVIQGEPG VIRGKKG GG+TIKKT ALI+GIYDEPMTPGQCN++VERLGDYLIDQG Sbjct: 25 ILGHDGSVWAQSPNFPQFKPEENAGIVKDFEEPGHLAPTGLFLGGTKYMVIQGEPGVVIRGKKGTGGITIKKTGMALILGIYDEPMTPGQCNLVVERLGDYLIDQG 130
BLAST of CX299919 vs. ExPASy Swiss-Prot
Match: PROF2_WHEAT (Profilin-2 OS=Triticum aestivum GN=PRO2 PE=2 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 3.900e-48 Identity = 87/106 (82.08%), Postives = 96/106 (90.57%), Query Frame = 1 Query: 1 IIGHDGSVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQG 318 I+GHDGSVWA+S NFP+ KPEEI GI+ DF EPG LAPTGL+LGGTKYMVIQGEPG VIRGKKG GG+TIKKT ALI+GIYDEPMTPGQCN++VERLGDYLIDQG Sbjct: 25 ILGHDGSVWAESPNFPKFKPEEIAGIVKDFEEPGHLAPTGLFLGGTKYMVIQGEPGVVIRGKKGTGGITIKKTGMALILGIYDEPMTPGQCNLVVERLGDYLIDQG 130
BLAST of CX299919 vs. ExPASy Swiss-Prot
Match: PROF_MERAN (Profilin OS=Mercurialis annua PE=1 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 6.652e-48 Identity = 86/107 (80.37%), Postives = 98/107 (91.59%), Query Frame = 1 Query: 1 IIGHDGSVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 321 I+GHDGS+WAQS +FPQLKPEEITGIM DF+EPG LAPTGLY+ GTKYMVIQGE GAVIRGKKG GG+TIKKT AL+ GIY+EP+TPGQCNM+VERLGDYLI+QG+ Sbjct: 27 IVGHDGSIWAQSASFPQLKPEEITGIMKDFDEPGHLAPTGLYIAGTKYMVIQGESGAVIRGKKGSGGITIKKTGQALVFGIYEEPVTPGQCNMVVERLGDYLIEQGM 133
BLAST of CX299919 vs. ExPASy Swiss-Prot
Match: PROF_DAUCA (Profilin OS=Daucus carota PE=1 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 8.687e-48 Identity = 89/107 (83.18%), Postives = 97/107 (90.65%), Query Frame = 1 Query: 1 IIGHDGSVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 321 IIGHDGSVWAQS FP+ KPEEITGIM +F+EPG LAPTGLYLGGTKYMVIQGEP AVIRGKKG GGVTIKKT AL+ G+YDEP+TPGQCN+IVERLGDYLI+QGL Sbjct: 28 IIGHDGSVWAQSSTFPKFKPEEITGIMKNFDEPGHLAPTGLYLGGTKYMVIQGEPIAVIRGKKGSGGVTIKKTGQALVFGVYDEPVTPGQCNLIVERLGDYLIEQGL 134
BLAST of CX299919 vs. ExPASy Swiss-Prot
Match: PROF2_PHLPR (Profilin-2/4 OS=Phleum pratense GN=PRO2 PE=1 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 8.687e-48 Identity = 84/107 (78.50%), Postives = 98/107 (91.59%), Query Frame = 1 Query: 1 IIGHDGSVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 321 I+GHDG+VWAQS +FPQ KPEEITGIM DF+EPG LAPTG+++ G KYMVIQGEPGAVIRGKKG GG+TIKKT AL++GIYDEPMTPGQCNM+VERLGDYL++QG+ Sbjct: 25 ILGHDGTVWAQSADFPQFKPEEITGIMKDFDEPGHLAPTGMFVAGAKYMVIQGEPGAVIRGKKGAGGITIKKTGQALVVGIYDEPMTPGQCNMVVERLGDYLVEQGM 131
BLAST of CX299919 vs. ExPASy Swiss-Prot
Match: PROF1_WHEAT (Profilin-1 (Fragment) OS=Triticum aestivum GN=PRO1 PE=2 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.135e-47 Identity = 86/106 (81.13%), Postives = 95/106 (89.62%), Query Frame = 1 Query: 1 IIGHDGSVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQG 318 I+GHDGSVW +S NFP+ KPEEI GI+ DF EPG LAPTGL+LGGTKYMVIQGEPG VIRGKKG GG+TIKKT ALI+GIYDEPMTPGQCN++VERLGDYLIDQG Sbjct: 25 ILGHDGSVWTESPNFPKFKPEEIAGIVKDFEEPGHLAPTGLFLGGTKYMVIQGEPGVVIRGKKGTGGITIKKTGMALILGIYDEPMTPGQCNLVVERLGDYLIDQG 130
BLAST of CX299919 vs. ExPASy Swiss-Prot
Match: PROF_BETVE (Profilin OS=Betula verrucosa GN=BETVII PE=1 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 1.482e-47 Identity = 87/107 (81.31%), Postives = 96/107 (89.72%), Query Frame = 1 Query: 1 IIGHDGSVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 321 I+GHDGSVWAQS +FPQ KP+EITGIM DF EPG LAPTGL+LGG KYMVIQGE GAVIRGKKG GG+TIKKT AL+ GIY+EP+TPGQCNM+VERLGDYLIDQGL Sbjct: 27 IVGHDGSVWAQSSSFPQFKPQEITGIMKDFEEPGHLAPTGLHLGGIKYMVIQGEAGAVIRGKKGSGGITIKKTGQALVFGIYEEPVTPGQCNMVVERLGDYLIDQGL 133
BLAST of CX299919 vs. ExPASy Swiss-Prot
Match: PROFA_ORYSJ (Profilin-A OS=Oryza sativa subsp. japonica GN=Os10g0323600 PE=2 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 1.482e-47 Identity = 85/107 (79.44%), Postives = 97/107 (90.65%), Query Frame = 1 Query: 1 IIGHDGSVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 321 I+GHDG+VWAQS FPQ KPEE+T IM DF+EPG LAPTGL+LG TKYMVIQGEPGAVIRGKKG GG+T+KKT AL++GIYDEPMTPGQCNM+VERLGDYL++QGL Sbjct: 25 IVGHDGTVWAQSAAFPQFKPEEMTNIMKDFDEPGFLAPTGLFLGPTKYMVIQGEPGAVIRGKKGSGGITVKKTGQALVVGIYDEPMTPGQCNMVVERLGDYLVEQGL 131
BLAST of CX299919 vs. ExPASy Swiss-Prot
Match: PROF5_HEVBR (Profilin-5 OS=Hevea brasiliensis PE=1 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 1.935e-47 Identity = 85/107 (79.44%), Postives = 97/107 (90.65%), Query Frame = 1 Query: 1 IIGHDGSVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 321 IIGHDGSVWAQS FPQ K +E+ +M DF+EPG+LAPTGL+LGGTKYMVIQGEPGAVIRGKKG GG+T+KKT ALIIGIYDEP+TPGQCNMIVERLGDYL++QG+ Sbjct: 25 IIGHDGSVWAQSSGFPQFKSDEVAAVMKDFDEPGSLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITVKKTGQALIIGIYDEPLTPGQCNMIVERLGDYLLEQGM 131
BLAST of CX299919 vs. ExPASy Swiss-Prot
Match: PROF4_HEVBR (Profilin-4 OS=Hevea brasiliensis PE=1 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 1.935e-47 Identity = 86/107 (80.37%), Postives = 98/107 (91.59%), Query Frame = 1 Query: 1 IIGHDGSVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 321 IIGHDGSVWAQS +FPQ K +E+ IM DF+EPG+LAPTGL+LG TKYMVIQGEPGAVIRGKKG GG+T+KKTS ALIIGIYDEP+TPGQCNMIVERLGDYL++QG+ Sbjct: 25 IIGHDGSVWAQSSSFPQFKSDEVAAIMKDFDEPGSLAPTGLHLGSTKYMVIQGEPGAVIRGKKGSGGITVKKTSQALIIGIYDEPLTPGQCNMIVERLGDYLLEQGM 131 The following BLAST results are available for this feature:
BLAST of CX299919 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 85
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299919 ID=CX299919; Name=CX299919; organism=Citrus clementina; type=EST; length=613bpback to top |