CX299937
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_ENTS8 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=clpX PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 7.117e-26 Identity = 53/98 (54.08%), Postives = 77/98 (78.57%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DLI +GLIPEF+GR P++ +L L+ED L+++L EPKNAL KQY+ LF++ V+L F ++AL IAKKA ++ TGARGLR+I+E+ L E MY++P ++ Sbjct: 294 DLIKFGLIPEFIGRLPVVATLNELSEDALIQILKEPKNALTKQYQALFNLEGVELEFRDEALEAIAKKAMSRKTGARGLRSIVEAALLETMYDLPSME 391
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_CLOBL (ATP-dependent Clp protease ATP-binding subunit clpX OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=clpX PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 7.117e-26 Identity = 54/95 (56.84%), Postives = 77/95 (81.05%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ +GLIPEF+GR PI+V+L L + L+K+LTEPKNAL KQYK+LF +++V+L F ++AL+ IA +A +NTGARGLRAI+E ++ E M++IP Sbjct: 288 DLLKFGLIPEFIGRLPIVVTLDKLDREALIKILTEPKNALVKQYKKLFELDDVELEFNQEALKEIADEAINRNTGARGLRAIIEDMMREIMFDIP 382
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_CLOBK (ATP-dependent Clp protease ATP-binding subunit clpX OS=Clostridium botulinum (strain Okra / Type B1) GN=clpX PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 7.117e-26 Identity = 54/95 (56.84%), Postives = 77/95 (81.05%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ +GLIPEF+GR PI+V+L L + L+K+LTEPKNAL KQYK+LF +++V+L F ++AL+ IA +A +NTGARGLRAI+E ++ E M++IP Sbjct: 288 DLLKFGLIPEFIGRLPIVVTLDKLDREALIKILTEPKNALVKQYKKLFELDDVELEFNQEALKEIADEAINRNTGARGLRAIIEDMMREIMFDIP 382
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_CLOBJ (ATP-dependent Clp protease ATP-binding subunit clpX OS=Clostridium botulinum (strain Kyoto / Type A2) GN=clpX PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 7.117e-26 Identity = 54/95 (56.84%), Postives = 77/95 (81.05%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ +GLIPEF+GR PI+V+L L + L+K+LTEPKNAL KQYK+LF +++V+L F ++AL+ IA +A +NTGARGLRAI+E ++ E M++IP Sbjct: 288 DLLKFGLIPEFIGRLPIVVTLDKLDREALIKILTEPKNALVKQYKKLFELDDVELEFNQEALKEIADEAINRNTGARGLRAIIEDMMREIMFDIP 382
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_CLOBH (ATP-dependent Clp protease ATP-binding subunit clpX OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=clpX PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 7.117e-26 Identity = 54/95 (56.84%), Postives = 77/95 (81.05%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ +GLIPEF+GR PI+V+L L + L+K+LTEPKNAL KQYK+LF +++V+L F ++AL+ IA +A +NTGARGLRAI+E ++ E M++IP Sbjct: 288 DLLKFGLIPEFIGRLPIVVTLDKLDREALIKILTEPKNALVKQYKKLFELDDVELEFNQEALKEIADEAINRNTGARGLRAIIEDMMREIMFDIP 382
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_CLOB6 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Clostridium botulinum (strain 657 / Type Ba4) GN=clpX PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 7.117e-26 Identity = 54/95 (56.84%), Postives = 77/95 (81.05%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ +GLIPEF+GR PI+V+L L + L+K+LTEPKNAL KQYK+LF +++V+L F ++AL+ IA +A +NTGARGLRAI+E ++ E M++IP Sbjct: 288 DLLKFGLIPEFIGRLPIVVTLDKLDREALIKILTEPKNALVKQYKKLFELDDVELEFNQEALKEIADEAINRNTGARGLRAIIEDMMREIMFDIP 382
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_CLOB1 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=clpX PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 7.117e-26 Identity = 54/95 (56.84%), Postives = 77/95 (81.05%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ +GLIPEF+GR PI+V+L L + L+K+LTEPKNAL KQYK+LF +++V+L F ++AL+ IA +A +NTGARGLRAI+E ++ E M++IP Sbjct: 288 DLLKFGLIPEFIGRLPIVVTLDKLDREALIKILTEPKNALVKQYKKLFELDDVELEFNQEALKEIADEAINRNTGARGLRAIIEDMMREIMFDIP 382
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_CAUSK (ATP-dependent Clp protease ATP-binding subunit clpX OS=Caulobacter sp. (strain K31) GN=clpX PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 7.117e-26 Identity = 57/96 (59.38%), Postives = 72/96 (75.00%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPD 362 DL +GLIPEF+GR P++ +L L E LVK+LTEPKNA KQY+RLF M N+ L FTE AL +AKKA + TGARGLR+I+E IL E M+E+P+ Sbjct: 291 DLQRFGLIPEFIGRLPVIATLEDLDEAALVKILTEPKNAFVKQYQRLFEMENIGLTFTEDALHGVAKKAILRKTGARGLRSIMEGILLETMFELPN 386
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_BUCAP (ATP-dependent Clp protease ATP-binding subunit clpX OS=Buchnera aphidicola subsp. Schizaphis graminum GN=clpX PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 7.117e-26 Identity = 57/98 (58.16%), Postives = 76/98 (77.55%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DLI +GLIPEF+GR PI+ L L E LV++L +PKNAL KQY+ LF++ VKL FT++A+ IAKKA +K TGARGLR+I+E+IL + MYE+P +K Sbjct: 296 DLIKFGLIPEFIGRLPIITILKELNETALVQILCKPKNALIKQYQTLFNLEKVKLEFTKEAVTSIAKKALSKKTGARGLRSIIENILLDIMYELPSMK 393
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_RHOSK (ATP-dependent Clp protease ATP-binding subunit clpX OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) GN=clpX PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 9.295e-26 Identity = 57/98 (58.16%), Postives = 74/98 (75.51%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DL+ +GLIPEFVGR P++ +LT L E LV +LTEPKNAL KQY+RLF + VKL FT AL IAK+A + TGARGLR+I+E IL + M+E+P ++ Sbjct: 290 DLLKFGLIPEFVGRLPVIATLTDLDEAALVTILTEPKNALVKQYQRLFEIEGVKLTFTADALTAIAKRAIKRKTGARGLRSIMEDILLDTMFELPGLE 387 The following BLAST results are available for this feature:
BLAST of CX299937 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299937 ID=CX299937; Name=CX299937; organism=Citrus clementina; type=EST; length=702bpback to top |