CX299937
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_EHRCJ (ATP-dependent Clp protease ATP-binding subunit clpX OS=Ehrlichia canis (strain Jake) GN=clpX PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 9.295e-26 Identity = 55/95 (57.89%), Postives = 72/95 (75.79%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ +GLIPEFVGR P++ SL+ L E L ++L EPKN+L KQYK+LF M+N+ L F + AL IAKKA + TGARGLRAILE++L + M+E P Sbjct: 284 DLVKFGLIPEFVGRIPVITSLSELNESTLCRILVEPKNSLVKQYKKLFEMDNIDLQFDDSALSEIAKKAAVRKTGARGLRAILEALLLDLMFESP 378
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_CLOBM (ATP-dependent Clp protease ATP-binding subunit clpX OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=clpX PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 9.295e-26 Identity = 54/95 (56.84%), Postives = 77/95 (81.05%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ +GLIPEF+GR PI+V+L L + L+K+LTEPKNAL KQYK+LF +++V+L F ++AL+ IA +A +NTGARGLRAI+E ++ E M++IP Sbjct: 288 DLLKFGLIPEFIGRLPIVVTLDKLDREALIKILTEPKNALVKQYKKLFELDDVELEFNQEALKGIADEAINRNTGARGLRAIIEDMMREIMFDIP 382
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_BRUSU (ATP-dependent Clp protease ATP-binding subunit clpX OS=Brucella suis GN=clpX PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 9.295e-26 Identity = 57/98 (58.16%), Postives = 74/98 (75.51%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DL+ +GLIPEFVGR P++ +L L D LV++LTEPKNAL KQY+RLF M NV+L F + ALR IA KA TGARGLR+I+E IL + M+E+P ++ Sbjct: 293 DLLKFGLIPEFVGRLPVIATLEDLDVDALVQILTEPKNALVKQYQRLFDMENVELVFHDDALRAIANKAVEHKTGARGLRSIMEKILLDTMFELPTLE 390
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_BRUSI (ATP-dependent Clp protease ATP-binding subunit clpX OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=clpX PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 9.295e-26 Identity = 57/98 (58.16%), Postives = 74/98 (75.51%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DL+ +GLIPEFVGR P++ +L L D LV++LTEPKNAL KQY+RLF M NV+L F + ALR IA KA TGARGLR+I+E IL + M+E+P ++ Sbjct: 293 DLLKFGLIPEFVGRLPVIATLEDLDVDALVQILTEPKNALVKQYQRLFDMENVELVFHDDALRAIANKAVEHKTGARGLRSIMEKILLDTMFELPTLE 390
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_TOLAT (ATP-dependent Clp protease ATP-binding subunit clpX OS=Tolumonas auensis (strain DSM 9187 / TA4) GN=clpX PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.214e-25 Identity = 53/98 (54.08%), Postives = 73/98 (74.49%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DL+ YGLIPEF+GR P++ +LT L E+ L+++L EPKNAL KQY+ LF + +L F E ALR IA KA + TGARGLR+I+E +L + MY++P V+ Sbjct: 296 DLVKYGLIPEFIGRLPVVATLTELDENALIQILVEPKNALTKQYQALFKLEGAELEFREDALRAIAHKAMERKTGARGLRSIVEGVLLDTMYDLPSVE 393
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_THEMA (ATP-dependent Clp protease ATP-binding subunit clpX OS=Thermotoga maritima GN=clpX PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.214e-25 Identity = 51/98 (52.04%), Postives = 78/98 (79.59%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DL+ YGLIPEFVGRFP++ +L L+ED LV++L EPKNA+ +QY++LF ++ VKL T++ALR+IA+KA + TGAR L+ + E ++ + M+E+P++K Sbjct: 283 DLVQYGLIPEFVGRFPVIATLDDLSEDDLVRILKEPKNAVVRQYQKLFEIDGVKLEVTDEALRIIARKALKRGTGARALKNVFEEMMIDMMFELPNLK 380
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_PEDPA (ATP-dependent Clp protease ATP-binding subunit clpX OS=Pediococcus pentosaceus (strain ATCC 25745 / 183-1w) GN=clpX PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.214e-25 Identity = 55/95 (57.89%), Postives = 75/95 (78.95%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ +GLIPEF+GR PIL +L LTE+ LV +LTEPKNAL KQYK L ++ V+L FT +AL IA +A ++NTGARGLR+I+E+++ + M+EIP Sbjct: 293 DLLNFGLIPEFIGRLPILSALEKLTEEDLVHILTEPKNALVKQYKTLLGLDGVELKFTPQALHAIANQAISRNTGARGLRSIIENVMRDIMFEIP 387
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_MYCTU (ATP-dependent Clp protease ATP-binding subunit clpX OS=Mycobacterium tuberculosis GN=clpX PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.214e-25 Identity = 56/95 (58.95%), Postives = 73/95 (76.84%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DLI +GLIPEF+GR P++ S+T L ++ LVK+L+EPKNAL KQY RLF M+ V+L FT+ AL IA +A + TGARGLRAI+E +L MY+IP Sbjct: 294 DLIKFGLIPEFIGRLPVVASVTNLDKESLVKILSEPKNALVKQYIRLFEMDGVELEFTDDALEAIADQAIHRGTGARGLRAIMEEVLLPVMYDIP 388
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_MYCTA (ATP-dependent Clp protease ATP-binding subunit clpX OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=clpX PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.214e-25 Identity = 56/95 (58.95%), Postives = 73/95 (76.84%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DLI +GLIPEF+GR P++ S+T L ++ LVK+L+EPKNAL KQY RLF M+ V+L FT+ AL IA +A + TGARGLRAI+E +L MY+IP Sbjct: 294 DLIKFGLIPEFIGRLPVVASVTNLDKESLVKILSEPKNALVKQYIRLFEMDGVELEFTDDALEAIADQAIHRGTGARGLRAIMEEVLLPVMYDIP 388
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_MYCGI (ATP-dependent Clp protease ATP-binding subunit clpX OS=Mycobacterium gilvum (strain PYR-GCK) GN=clpX PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.214e-25 Identity = 56/95 (58.95%), Postives = 72/95 (75.79%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DLI +GLIPEF+GR P++ S+T L ++ LVK+L+EPKNAL KQY RLF M+ V+L F E AL IA +A + TGARGLRAI+E +L MY+IP Sbjct: 294 DLIKFGLIPEFIGRLPVVASVTNLDKESLVKILSEPKNALVKQYTRLFEMDGVELEFAEDALEAIADQAIHRGTGARGLRAIMEEVLLPVMYDIP 388 The following BLAST results are available for this feature:
BLAST of CX299937 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299937 ID=CX299937; Name=CX299937; organism=Citrus clementina; type=EST; length=702bpback to top |