CX299937
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_NITEU (ATP-dependent Clp protease ATP-binding subunit clpX OS=Nitrosomonas europaea GN=clpX PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.342e-24 Identity = 56/99 (56.57%), Postives = 75/99 (75.76%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM-NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DLI YGLIPEFVGR P++ +L+ L E L+++L EPKNAL KQY +LFSM V+L F E+AL IA+KA ++ TGARGLR+ILE L + MY++P ++ Sbjct: 295 DLIKYGLIPEFVGRLPVVATLSELNEAALIQILVEPKNALIKQYNKLFSMEGGVELEFREQALVAIARKALSRKTGARGLRSILEETLLDIMYDLPSIE 393
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_DEIGD (ATP-dependent Clp protease ATP-binding subunit clpX OS=Deinococcus geothermalis (strain DSM 11300) GN=clpX PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.342e-24 Identity = 53/95 (55.79%), Postives = 72/95 (75.79%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ +GLIPEFVGR P++V L L ED LV++LTEP+ A+ KQY+ LF V L FTE+ALR +A +A A+ TGARGLRA+LE +T+ ++E+P Sbjct: 282 DLVKFGLIPEFVGRLPLVVQLQDLDEDALVRILTEPQGAIVKQYQALFGFQGVDLTFTEEALREVAHRAKARKTGARGLRAVLEKAMTDLLFELP 376
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_ANOFW (ATP-dependent Clp protease ATP-binding subunit clpX OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=clpX PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.342e-24 Identity = 52/95 (54.74%), Postives = 74/95 (77.89%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ +GLIPEFVGR P++ SL L ED LV +L +PKNAL KQY+++ +++V+L F E+ALR IAK+A + TGARGLR+I+E I+ + M+E+P Sbjct: 287 DLLKFGLIPEFVGRLPVITSLQPLDEDALVDILVKPKNALVKQYEKMLELDDVELEFEEEALREIAKRAIERKTGARGLRSIIEGIMLDVMFELP 381
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_AERHH (ATP-dependent Clp protease ATP-binding subunit clpX OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=clpX PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.342e-24 Identity = 52/97 (53.61%), Postives = 72/97 (74.23%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDV 365 DLI YGLIPEF+GR P++ +LT L E L+++L EPKNAL KQY LF + V+L F + AL IA+KA + TGARGLR+I+E++L + MY++P + Sbjct: 294 DLIKYGLIPEFIGRLPVVATLTELDEAALIQILKEPKNALTKQYAALFDLEGVELEFRDDALNAIARKAMERKTGARGLRSIVEAVLLDTMYDLPSL 390
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_SYNP2 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=clpX PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.753e-24 Identity = 51/98 (52.04%), Postives = 74/98 (75.51%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DL+ YG+IPEF+GR P++ SL+ L E+ LV++LT+PKNAL KQYK+L M++V+L F A+R IA++A + TGAR LR I+E ++ + MYE+P K Sbjct: 313 DLVKYGMIPEFIGRIPVIASLSPLDEEALVEILTQPKNALVKQYKKLLKMDSVQLEFEPTAIRAIAQEAYRRKTGARALRGIVEELMLDVMYELPSRK 410
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_NEOSM (ATP-dependent Clp protease ATP-binding subunit clpX OS=Neorickettsia sennetsu (strain Miyayama) GN=clpX PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.753e-24 Identity = 55/102 (53.92%), Postives = 77/102 (75.49%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP---DVKT 371 DL+ +G+IPEFVGR P++ L LTED LV++L+ PKNAL KQY LF M+N++L F+++AL+ +A+ A + GARGLRAI+ES+L M+E+P DVKT Sbjct: 284 DLVKFGMIPEFVGRLPVIGVLDELTEDNLVEILSVPKNALVKQYVCLFGMDNIQLSFSDEALKTVARAAIKRKVGARGLRAIMESVLRNYMFELPSNKDVKT 385
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_MAGSA (ATP-dependent Clp protease ATP-binding subunit clpX OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=clpX PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.753e-24 Identity = 52/95 (54.74%), Postives = 75/95 (78.95%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ +GLIPEFVGR P+L +L L D L+ +L++PKNAL KQY+RLF M + +L F++ AL+ IA+KA A+ TGARGLR+I+E+IL + M+++P Sbjct: 291 DLLKFGLIPEFVGRLPVLATLEDLDVDALIDILSKPKNALVKQYQRLFEMEDTRLAFSDDALKAIAEKAIARKTGARGLRSIMETILLDTMFDLP 385
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_LACLS (ATP-dependent Clp protease ATP-binding subunit clpX OS=Lactococcus lactis subsp. cremoris (strain SK11) GN=clpX PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.753e-24 Identity = 52/95 (54.74%), Postives = 73/95 (76.84%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 D+ +GLIPEF+GR PI+ +L LTE+ L+++LTEPKNAL KQYK+L +NV+L F + AL IAKKA + TGARGLR+I+E ++ + M+E+P Sbjct: 287 DIQKFGLIPEFIGRLPIVAALERLTEEDLIQILTEPKNALIKQYKQLLLFDNVELEFKDGALMAIAKKAIERKTGARGLRSIIEEVMMDIMFEVP 381
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_LACLM (ATP-dependent Clp protease ATP-binding subunit clpX OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=clpX PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.753e-24 Identity = 52/95 (54.74%), Postives = 73/95 (76.84%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 D+ +GLIPEF+GR PI+ +L LTE+ L+++LTEPKNAL KQYK+L +NV+L F + AL IAKKA + TGARGLR+I+E ++ + M+E+P Sbjct: 287 DIQKFGLIPEFIGRLPIVAALERLTEEDLIQILTEPKNALIKQYKQLLLFDNVELEFKDGALMAIAKKAIERKTGARGLRSIIEEVMMDIMFEVP 381
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_LACLA (ATP-dependent Clp protease ATP-binding subunit clpX OS=Lactococcus lactis subsp. lactis GN=clpX PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.753e-24 Identity = 51/95 (53.68%), Postives = 74/95 (77.89%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 D+ +GLIPEF+GR PI+ +L LTE+ L+++LTEPKNAL KQYK+L +NV+L F ++AL IA+KA + TGARGLR+I+E ++ + M+E+P Sbjct: 287 DIQKFGLIPEFIGRLPIVAALERLTEEDLIQILTEPKNALIKQYKQLLLFDNVELEFEDEALMAIARKAIERKTGARGLRSIIEEVMMDIMFEVP 381 The following BLAST results are available for this feature:
BLAST of CX299937 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299937 ID=CX299937; Name=CX299937; organism=Citrus clementina; type=EST; length=702bpback to top |