CX299937
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_GEOSM (ATP-dependent Clp protease ATP-binding subunit clpX OS=Geobacter sp. (strain M21) GN=clpX PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.753e-24 Identity = 54/95 (56.84%), Postives = 74/95 (77.89%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ +G IPEFVGR P+L SL+ L E+ +V++L EPKNAL KQY++LF M +VKL FT+ +L IA++A + TGARGLR+ILE+ + + MYEIP Sbjct: 291 DLLKFGFIPEFVGRLPMLASLSELDEEAMVQILKEPKNALIKQYQKLFDMEHVKLKFTDGSLVAIAREALKRKTGARGLRSILENAMLDIMYEIP 385
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_GEOBB (ATP-dependent Clp protease ATP-binding subunit clpX OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=clpX PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.753e-24 Identity = 54/95 (56.84%), Postives = 74/95 (77.89%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ +G IPEFVGR P+L SL+ L E+ +V++L EPKNAL KQY++LF M +VKL FT+ +L IA++A + TGARGLR+ILE+ + + MYEIP Sbjct: 291 DLLKFGFIPEFVGRLPMLASLSELDEEAMVQILKEPKNALIKQYQKLFDMEHVKLKFTDGSLVAIAREALKRKTGARGLRSILENAMLDIMYEIP 385
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_CORGB (ATP-dependent Clp protease ATP-binding subunit clpX OS=Corynebacterium glutamicum (strain R) GN=clpX PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.753e-24 Identity = 53/96 (55.21%), Postives = 73/96 (76.04%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPD 362 DL+ +GLIPEF+GR P++ +++ L + LVKVLTEP+N+L KQY+RLF M++ L FT+ AL IA +A + TGARGLRAI+E IL MY++PD Sbjct: 299 DLVKFGLIPEFIGRLPVVATVSNLDQKSLVKVLTEPRNSLVKQYQRLFEMDDAVLTFTDDALEEIANQALERKTGARGLRAIMEEILVPIMYDLPD 394
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_CLOK5 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=clpX PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.753e-24 Identity = 53/95 (55.79%), Postives = 73/95 (76.84%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ +GLIPEFVGR PI+V+L AL L+ +L EPKNAL KQYK+LF +++V+L F ++AL IA +A +NTGARGLRAI+E + + M++IP Sbjct: 289 DLLKFGLIPEFVGRIPIIVTLEALDRAALISILKEPKNALVKQYKKLFELDDVELEFKDEALEAIADEALKRNTGARGLRAIIEETMKDVMFDIP 383
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_CLOK1 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Clostridium kluyveri (strain NBRC 12016) GN=clpX PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.753e-24 Identity = 53/95 (55.79%), Postives = 73/95 (76.84%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ +GLIPEFVGR PI+V+L AL L+ +L EPKNAL KQYK+LF +++V+L F ++AL IA +A +NTGARGLRAI+E + + M++IP Sbjct: 291 DLLKFGLIPEFVGRIPIIVTLEALDRAALISILKEPKNALVKQYKKLFELDDVELEFKDEALEAIADEALKRNTGARGLRAIIEETMKDVMFDIP 385
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_PHOLL (ATP-dependent Clp protease ATP-binding subunit clpX OS=Photorhabdus luminescens subsp. laumondii GN=clpX PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.290e-24 Identity = 51/98 (52.04%), Postives = 74/98 (75.51%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DLI +GLIPEF+GR P++ +L+ L+E+ L+++L EPKNAL KQY+ LF++ V L F +AL IAKKA + TGARGLR+I+E L + MY++P ++ Sbjct: 294 DLIKFGLIPEFIGRLPVVATLSELSEEALIQILKEPKNALTKQYQALFNLEGVDLEFRSEALTAIAKKAMVRKTGARGLRSIVEGALLDTMYDLPSME 391
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_GRABC (ATP-dependent Clp protease ATP-binding subunit clpX OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=clpX PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.290e-24 Identity = 53/98 (54.08%), Postives = 73/98 (74.49%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DL+ +GLIPEF+GR P++ +L L E L+++LT+PKNAL KQY RLF M V L FT+ AL+ +A +A A+ TGARGLR+ILE IL MY++P ++ Sbjct: 291 DLLRFGLIPEFIGRLPVVATLEDLDEAALIEILTKPKNALVKQYGRLFEMEGVSLSFTDDALKSVANRAIARKTGARGLRSILEGILLGTMYDLPGME 388
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_EUBR3 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Eubacterium rectale (strain ATCC 33656 / VPI 0990) GN=clpX PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.290e-24 Identity = 53/99 (53.54%), Postives = 72/99 (72.73%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVKT 371 D + +GLIPEF+GR PI VSL AL D L+++L EPKN+L KQY +LF ++ V L FT+ A+ IA KA + TGARGLRAI+E+++ + MY IP K+ Sbjct: 292 DFVKFGLIPEFIGRVPITVSLEALDRDALIRILKEPKNSLIKQYTKLFELDGVGLEFTDDAVNAIADKALERKTGARGLRAIMEAVMLDLMYRIPSDKS 390
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_EHRRW (ATP-dependent Clp protease ATP-binding subunit clpX OS=Ehrlichia ruminantium (strain Welgevonden) GN=clpX PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.290e-24 Identity = 53/95 (55.79%), Postives = 70/95 (73.68%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ +GLIPEFVGR P++ SL L E L ++L EPKN+L KQYK+LF M+N+ L F + AL IA+KA + GARGLRAILE++L + M+E P Sbjct: 284 DLVKFGLIPEFVGRIPVITSLGELDEATLCRILVEPKNSLVKQYKKLFEMDNINLEFDDSALSEIARKAAVRKAGARGLRAILENLLLDLMFETP 378
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_EHRRG (ATP-dependent Clp protease ATP-binding subunit clpX OS=Ehrlichia ruminantium (strain Gardel) GN=clpX PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.290e-24 Identity = 53/95 (55.79%), Postives = 70/95 (73.68%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ +GLIPEFVGR P++ SL L E L ++L EPKN+L KQYK+LF M+N+ L F + AL IA+KA + GARGLRAILE++L + M+E P Sbjct: 284 DLVKFGLIPEFVGRIPVITSLGELDEATLCRILVEPKNSLVKQYKKLFEMDNINLEFDDSALSEIARKAAVRKAGARGLRAILENLLLDLMFETP 378 The following BLAST results are available for this feature:
BLAST of CX299937 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299937 ID=CX299937; Name=CX299937; organism=Citrus clementina; type=EST; length=702bpback to top |