CX299937
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_CYAP7 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Cyanothece sp. (strain PCC 7424) GN=clpX PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.290e-24 Identity = 51/98 (52.04%), Postives = 73/98 (74.49%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DL+ +G+IPEFVGR P++ SL L ED L+ +LT+P+NAL KQY++L M+NV+L F +A+R IA++A + TGAR LR I+E ++ E MYE+P K Sbjct: 317 DLVKFGMIPEFVGRIPVMASLDPLDEDALIAILTQPRNALVKQYQKLLKMDNVQLEFKSEAVRAIAQEAYRRKTGARALRGIVEELMLEVMYELPSRK 414
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_ALKMQ (ATP-dependent Clp protease ATP-binding subunit clpX OS=Alkaliphilus metalliredigens (strain QYMF) GN=clpX PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.290e-24 Identity = 51/95 (53.68%), Postives = 74/95 (77.89%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ +GLIPEFVGR P++V+L L E L+++LTEPKNAL KQYK+LF ++ V + F +AL++IA+KA + TGARGLR I+E ++ + MY++P Sbjct: 288 DLLKFGLIPEFVGRLPVIVTLDQLDEAALIEILTEPKNALVKQYKKLFEIDGVNVEFEGEALKLIAEKAIERKTGARGLRGIVEGLMMDIMYDVP 382
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_AERS4 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Aeromonas salmonicida (strain A449) GN=clpX PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.290e-24 Identity = 52/98 (53.06%), Postives = 72/98 (73.47%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DLI YGLIPEF+GR P++ +LT L E L+++L EPKNAL KQY LF + V+L F + AL IA KA + TGARGLR+I+E++L + MY++P ++ Sbjct: 294 DLIKYGLIPEFIGRLPVVATLTELDEAALIQILKEPKNALTKQYAALFDLEGVELEFRDDALNAIAHKAMERKTGARGLRSIVEAVLLDTMYDLPSLE 391
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_SHEPA (ATP-dependent Clp protease ATP-binding subunit clpX OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=clpX PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.990e-24 Identity = 50/95 (52.63%), Postives = 73/95 (76.84%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ +GLIPEF+GR P+L +L+ L ++ L+++L+EPKNA+ KQ+ LF M NV+L F + AL+ IA KA + TGARGLR+I+E IL + MY++P Sbjct: 295 DLVKFGLIPEFIGRLPVLATLSELDDEALIQILSEPKNAITKQFAALFEMENVELEFRDDALKAIALKAQTRKTGARGLRSIVEGILLDIMYDLP 389
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_SHELP (ATP-dependent Clp protease ATP-binding subunit clpX OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=clpX PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.990e-24 Identity = 53/98 (54.08%), Postives = 71/98 (72.45%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DL+ YGLIPEF+GR P+L +L L E L+++L+EPKNAL KQ+ LF M V+L F E AL+ IA KA + TGARGLR+I+E IL + MY++P + Sbjct: 295 DLVKYGLIPEFIGRLPVLATLAELDEAALIQILSEPKNALTKQFAALFEMEGVELEFREDALKAIALKAMDRKTGARGLRSIVEGILLDIMYDLPSTE 392
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_SHEHH (ATP-dependent Clp protease ATP-binding subunit clpX OS=Shewanella halifaxensis (strain HAW-EB4) GN=clpX PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.990e-24 Identity = 50/95 (52.63%), Postives = 73/95 (76.84%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ +GLIPEF+GR P+L +L+ L ++ L+++L+EPKNA+ KQ+ LF M NV+L F + AL+ IA KA + TGARGLR+I+E IL + MY++P Sbjct: 295 DLVKFGLIPEFIGRLPVLATLSELDDEALIQILSEPKNAITKQFAALFEMENVELEFRDDALKAIALKAQTRKTGARGLRSIVEGILLDIMYDLP 389
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_CYAA5 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Cyanothece sp. (strain ATCC 51142) GN=clpX PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.990e-24 Identity = 49/98 (50.00%), Postives = 77/98 (78.57%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DL+ +G+IPEFVGR P++ +L LTE+ LV +LT+P+NAL KQY++L +M+NV+L F+++A++ IA++A + TGAR LR I+E ++ + MYE+P K Sbjct: 305 DLVKFGMIPEFVGRIPVMAALNPLTEETLVAILTKPRNALVKQYQKLLNMDNVELEFSQEAVKAIAQEAYRRKTGARALRGIVEELMLDVMYELPSRK 402
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_ANAMM (ATP-dependent Clp protease ATP-binding subunit clpX OS=Anaplasma marginale (strain St. Maries) GN=clpX PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.990e-24 Identity = 53/92 (57.61%), Postives = 71/92 (77.17%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMY 350 DL+ +GLIPEFVGR P++ SL L E+ L ++L EPKN+L KQY +LF M+N++L F AL +AKKA A+NTGARGLRAI+ES+L + M+ Sbjct: 284 DLVKFGLIPEFVGRIPVVTSLGRLDEETLYRILVEPKNSLVKQYTKLFEMDNLELKFDNAALLAVAKKAVARNTGARGLRAIMESLLLDFMF 375
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_ANAMF (ATP-dependent Clp protease ATP-binding subunit clpX OS=Anaplasma marginale (strain Florida) GN=clpX PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.990e-24 Identity = 53/92 (57.61%), Postives = 71/92 (77.17%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMY 350 DL+ +GLIPEFVGR P++ SL L E+ L ++L EPKN+L KQY +LF M+N++L F AL +AKKA A+NTGARGLRAI+ES+L + M+ Sbjct: 284 DLVKFGLIPEFVGRIPVVTSLGRLDEETLYRILVEPKNSLVKQYTKLFEMDNLELKFDNAALLAVAKKAVARNTGARGLRAIMESLLLDFMF 375
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_SHEWM (ATP-dependent Clp protease ATP-binding subunit clpX OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=clpX PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.905e-24 Identity = 52/95 (54.74%), Postives = 71/95 (74.74%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ YGLIPEF+GR P+L +L L + L+++L+EPKNAL KQ+ LF M +V+L F E AL+ IA KA + TGARGLR+I+E IL + MY++P Sbjct: 295 DLVKYGLIPEFIGRLPVLATLAELDDAALIQILSEPKNALTKQFAALFEMEDVELEFREDALKAIALKAKTRKTGARGLRSIVEGILLDIMYDLP 389 The following BLAST results are available for this feature:
BLAST of CX299937 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299937 ID=CX299937; Name=CX299937; organism=Citrus clementina; type=EST; length=702bpback to top |