CX299937
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_PROMH (ATP-dependent Clp protease ATP-binding subunit clpX OS=Proteus mirabilis (strain HI4320) GN=clpX PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.905e-24 Identity = 52/95 (54.74%), Postives = 71/95 (74.74%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DLI +GLIPEF+GR P++ +L L ED L+++L EPKNAL KQY+ LF + V L F + AL IAKKA ++ TGARGLR+I+E+ L + MY++P Sbjct: 294 DLIKFGLIPEFIGRLPVVATLGELNEDALIQILQEPKNALTKQYQALFKLEGVDLEFRKDALTAIAKKAMSRKTGARGLRSIVEAALLDTMYDLP 388
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_MYXXA (ATP-dependent Clp protease ATP-binding subunit clpX OS=Myxococcus xanthus GN=clpX PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.905e-24 Identity = 52/99 (52.53%), Postives = 72/99 (72.73%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVKT 371 DL+ +G+IPEF+GR PI+ +L L E L+ +L +PKNAL KQY++LF ++ V L FT+ AL+ IA +A + GARGLR+ILES + + MYEIP KT Sbjct: 293 DLLKFGMIPEFIGRLPIITALEELDEAALINILNQPKNALTKQYRKLFELDGVTLKFTDGALKAIANEAIRRKAGARGLRSILESAMLDVMYEIPSRKT 391
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_METPP (ATP-dependent Clp protease ATP-binding subunit clpX OS=Methylibium petroleiphilum (strain PM1) GN=clpX PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.905e-24 Identity = 53/95 (55.79%), Postives = 73/95 (76.84%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DLI +GLIPE VGR P++ +L LTED +V++LTEPKNAL KQY++LF+M+ V+L AL IA+KA A+ TGARGLR+I+E L + M+++P Sbjct: 297 DLIKFGLIPELVGRLPVVATLGELTEDAMVQILTEPKNALVKQYQKLFAMDGVELEIRPSALTAIAQKALARKTGARGLRSIMEHSLMDTMFDLP 391
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_GEOTN (ATP-dependent Clp protease ATP-binding subunit clpX OS=Geobacillus thermodenitrificans (strain NG80-2) GN=clpX PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.905e-24 Identity = 50/95 (52.63%), Postives = 72/95 (75.79%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ +GLIPEF+GR P++ +L L E L+ +LT+PKNA+ KQYK++ ++ V+L F E ALR IAKKA + TGARGLR+I+E I+ + M+E+P Sbjct: 288 DLLKFGLIPEFIGRLPVITTLEPLDEQALIDILTKPKNAIVKQYKKMLELDGVELEFEEAALREIAKKAIERKTGARGLRSIIEGIMLDVMFELP 382
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_GEOSW (ATP-dependent Clp protease ATP-binding subunit clpX OS=Geobacillus sp. (strain WCH70) GN=clpX PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.905e-24 Identity = 51/95 (53.68%), Postives = 73/95 (76.84%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ +GLIPEFVGR P++ +L L E LV +LT+PKNA+ KQY+++ ++ V+L F E+ALR IAKKA + TGARGLR+I+E I+ + M+E+P Sbjct: 288 DLLKFGLIPEFVGRLPVITTLEPLDEQALVDILTKPKNAIVKQYQKMLELDGVELEFEEEALREIAKKAIERKTGARGLRSIIEGIMLDVMFELP 382
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_CORDI (ATP-dependent Clp protease ATP-binding subunit clpX OS=Corynebacterium diphtheriae GN=clpX PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.905e-24 Identity = 54/96 (56.25%), Postives = 71/96 (73.96%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPD 362 DL+ +GLIPEF+GR PI+ ++ L + LVKVLTEP+N+L KQY+RLF M+ V L F +AL+ IA A + TGARGLRAI+E +L MY+IPD Sbjct: 300 DLVKFGLIPEFIGRLPIVATVNNLDQASLVKVLTEPRNSLVKQYQRLFDMDRVDLEFDPEALQAIADLAIDRGTGARGLRAIMEELLVPVMYDIPD 395
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_CLOPH (ATP-dependent Clp protease ATP-binding subunit clpX OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=clpX PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.905e-24 Identity = 51/95 (53.68%), Postives = 75/95 (78.95%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DLI +G+IPEFVGR P+ +L L E LV++LTEPKNA+ KQY++LF ++ V+L F E AL+ IAK++ + TGARGLRAI+ES++ ++M+++P Sbjct: 291 DLIKFGMIPEFVGRVPVNTALDLLDEQALVRILTEPKNAITKQYRKLFELDGVELVFEEDALKEIAKRSFERKTGARGLRAIMESVMMDSMFKVP 385
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_AZOSE (ATP-dependent Clp protease ATP-binding subunit clpX OS=Azoarcus sp. (strain EbN1) GN=clpX PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.905e-24 Identity = 53/98 (54.08%), Postives = 72/98 (73.47%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DLI +GLIPEFVGR P++ +L L E+ L+++L EPKNAL KQY++LFSM V L AL +A+KA + TGARGLR+ILES L + MY++P ++ Sbjct: 293 DLIKFGLIPEFVGRLPVVATLQELDEEALIQILVEPKNALVKQYQKLFSMEGVDLEIRPAALHAVARKAIRRKTGARGLRSILESALLDIMYDLPTLE 390
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_AZOC5 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=clpX PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.905e-24 Identity = 54/98 (55.10%), Postives = 72/98 (73.47%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DL+ YGLIPEF+GR P+L +L L E L ++L EPKNAL KQY+RLF M NV L E+AL IA+KA + TGARGLR+I+E IL + M+++P ++ Sbjct: 292 DLLKYGLIPEFIGRLPVLATLNDLDEAALKQILAEPKNALVKQYQRLFEMENVDLTIHEEALGAIARKAIERKTGARGLRSIMEGILLDTMFDLPGLE 389
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_STRMU (ATP-dependent Clp protease ATP-binding subunit clpX OS=Streptococcus mutans GN=clpX PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.101e-24 Identity = 53/95 (55.79%), Postives = 72/95 (75.79%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 D+ +GLIPEF+GR P+L +L LT D LVK+LTEPKNAL KQY+ L S + V+L F ++AL+ IA+KA + TGARGLR+I+E + + M+EIP Sbjct: 289 DIQKFGLIPEFIGRLPVLAALEQLTVDDLVKILTEPKNALVKQYQTLLSYDGVELEFDQEALQAIAQKAIERKTGARGLRSIIEETMLDLMFEIP 383 The following BLAST results are available for this feature:
BLAST of CX299937 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299937 ID=CX299937; Name=CX299937; organism=Citrus clementina; type=EST; length=702bpback to top |