CX299937

Overview
NameCX299937
Unique NameCX299937
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length702
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_DIAST (ATP-dependent Clp protease ATP-binding subunit clpX OS=Diaphorobacter sp. (strain TPSY) GN=clpX PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.662e-24
Identity = 54/97 (55.67%), Postives = 72/97 (74.23%), Query Frame = 3 
Query:   75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDV 365
            DLI +GLIPE VGR P++ +L  L+ED LV++LTEPKNAL KQY +L +M  V+L     AL+ IA+KA A+ TGARGLR+ILE  L   M+++P+V
Sbjct:  295 DLIKFGLIPELVGRMPVVTALAELSEDALVQILTEPKNALVKQYSKLLAMEGVELEIRPAALKSIARKAIARKTGARGLRSILEQALIGTMFDLPNV 391
[Close]
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_BACHK (ATP-dependent Clp protease ATP-binding subunit clpX OS=Bacillus thuringiensis subsp. konkukian GN=clpX PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.662e-24
Identity = 52/98 (53.06%), Postives = 74/98 (75.51%), Query Frame = 3 
Query:   75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368
            DL+ +GLIPEF+GR P++ +L  L ED LV +LT+PKNAL KQ+++L  +++V+L F E AL  IAKKA  + TGARGLR+I+E ++ E M+E+P  K
Sbjct:  288 DLLRFGLIPEFIGRLPVIANLEPLDEDALVDILTKPKNALVKQFQKLLELDDVELEFEEGALIEIAKKAIERKTGARGLRSIIEGLMLEVMFELPSRK 385
[Close]
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_BACCZ (ATP-dependent Clp protease ATP-binding subunit clpX OS=Bacillus cereus (strain ZK / E33L) GN=clpX PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.662e-24
Identity = 52/98 (53.06%), Postives = 74/98 (75.51%), Query Frame = 3 
Query:   75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368
            DL+ +GLIPEF+GR P++ +L  L ED LV +LT+PKNAL KQ+++L  +++V+L F E AL  IAKKA  + TGARGLR+I+E ++ E M+E+P  K
Sbjct:  288 DLLRFGLIPEFIGRLPVIANLEPLDEDALVDILTKPKNALVKQFQKLLELDDVELEFEEGALIEIAKKAIERKTGARGLRSIIEGLMLEVMFELPSRK 385
[Close]
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_BACCQ (ATP-dependent Clp protease ATP-binding subunit clpX OS=Bacillus cereus (strain Q1) GN=clpX PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.662e-24
Identity = 52/98 (53.06%), Postives = 74/98 (75.51%), Query Frame = 3 
Query:   75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368
            DL+ +GLIPEF+GR P++ +L  L ED LV +LT+PKNAL KQ+++L  +++V+L F E AL  IAKKA  + TGARGLR+I+E ++ E M+E+P  K
Sbjct:  288 DLLRFGLIPEFIGRLPVIANLEPLDEDALVDILTKPKNALVKQFQKLLELDDVELEFEEGALIEIAKKAIERKTGARGLRSIIEGLMLEVMFELPSRK 385
[Close]
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_BACC7 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Bacillus cereus (strain AH187) GN=clpX PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.662e-24
Identity = 52/98 (53.06%), Postives = 74/98 (75.51%), Query Frame = 3 
Query:   75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368
            DL+ +GLIPEF+GR P++ +L  L ED LV +LT+PKNAL KQ+++L  +++V+L F E AL  IAKKA  + TGARGLR+I+E ++ E M+E+P  K
Sbjct:  288 DLLRFGLIPEFIGRLPVIANLEPLDEDALVDILTKPKNALVKQFQKLLELDDVELEFEEGALIEIAKKAIERKTGARGLRSIIEGLMLEVMFELPSRK 385
[Close]
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_BACC3 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Bacillus cereus (strain 03BB102) GN=clpX PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.662e-24
Identity = 52/98 (53.06%), Postives = 74/98 (75.51%), Query Frame = 3 
Query:   75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368
            DL+ +GLIPEF+GR P++ +L  L ED LV +LT+PKNAL KQ+++L  +++V+L F E AL  IAKKA  + TGARGLR+I+E ++ E M+E+P  K
Sbjct:  288 DLLRFGLIPEFIGRLPVIANLEPLDEDALVDILTKPKNALVKQFQKLLELDDVELEFEEGALIEIAKKAIERKTGARGLRSIIEGLMLEVMFELPSRK 385
[Close]
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_BACC1 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Bacillus cereus (strain ATCC 10987) GN=clpX PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.662e-24
Identity = 52/98 (53.06%), Postives = 74/98 (75.51%), Query Frame = 3 
Query:   75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368
            DL+ +GLIPEF+GR P++ +L  L ED LV +LT+PKNAL KQ+++L  +++V+L F E AL  IAKKA  + TGARGLR+I+E ++ E M+E+P  K
Sbjct:  288 DLLRFGLIPEFIGRLPVIANLEPLDEDALVDILTKPKNALVKQFQKLLELDDVELEFEEGALIEIAKKAIERKTGARGLRSIIEGLMLEVMFELPSRK 385
[Close]
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_BACC0 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Bacillus cereus (strain AH820) GN=clpX PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.662e-24
Identity = 52/98 (53.06%), Postives = 74/98 (75.51%), Query Frame = 3 
Query:   75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368
            DL+ +GLIPEF+GR P++ +L  L ED LV +LT+PKNAL KQ+++L  +++V+L F E AL  IAKKA  + TGARGLR+I+E ++ E M+E+P  K
Sbjct:  288 DLLRFGLIPEFIGRLPVIANLEPLDEDALVDILTKPKNALVKQFQKLLELDDVELEFEEGALIEIAKKAIERKTGARGLRSIIEGLMLEVMFELPSRK 385
[Close]
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_BACAN (ATP-dependent Clp protease ATP-binding subunit clpX OS=Bacillus anthracis GN=clpX PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.662e-24
Identity = 52/98 (53.06%), Postives = 74/98 (75.51%), Query Frame = 3 
Query:   75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368
            DL+ +GLIPEF+GR P++ +L  L ED LV +LT+PKNAL KQ+++L  +++V+L F E AL  IAKKA  + TGARGLR+I+E ++ E M+E+P  K
Sbjct:  288 DLLRFGLIPEFIGRLPVIANLEPLDEDALVDILTKPKNALVKQFQKLLELDDVELEFEEGALIEIAKKAIERKTGARGLRSIIEGLMLEVMFELPSRK 385
[Close]
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_BACAC (ATP-dependent Clp protease ATP-binding subunit clpX OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=clpX PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.662e-24
Identity = 52/98 (53.06%), Postives = 74/98 (75.51%), Query Frame = 3 
Query:   75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368
            DL+ +GLIPEF+GR P++ +L  L ED LV +LT+PKNAL KQ+++L  +++V+L F E AL  IAKKA  + TGARGLR+I+E ++ E M+E+P  K
Sbjct:  288 DLLRFGLIPEFIGRLPVIANLEPLDEDALVDILTKPKNALVKQFQKLLELDDVELEFEEGALIEIAKKAIERKTGARGLRSIIEGLMLEVMFELPSRK 385
The following BLAST results are available for this feature:
BLAST of CX299937 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CLPX_DIAST6.662e-2455.67ATP-dependent Clp protease ATP-binding subunit clp... [more]
CLPX_BACHK6.662e-2453.06ATP-dependent Clp protease ATP-binding subunit clp... [more]
CLPX_BACCZ6.662e-2453.06ATP-dependent Clp protease ATP-binding subunit clp... [more]
CLPX_BACCQ6.662e-2453.06ATP-dependent Clp protease ATP-binding subunit clp... [more]
CLPX_BACC76.662e-2453.06ATP-dependent Clp protease ATP-binding subunit clp... [more]
CLPX_BACC36.662e-2453.06ATP-dependent Clp protease ATP-binding subunit clp... [more]
CLPX_BACC16.662e-2453.06ATP-dependent Clp protease ATP-binding subunit clp... [more]
CLPX_BACC06.662e-2453.06ATP-dependent Clp protease ATP-binding subunit clp... [more]
CLPX_BACAN6.662e-2453.06ATP-dependent Clp protease ATP-binding subunit clp... [more]
CLPX_BACAC6.662e-2453.06ATP-dependent Clp protease ATP-binding subunit clp... [more]

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Properties
Property NameValue
Genbank descriptionC07004C01SK SaltLeaf1 Citrus clementina cDNA clone C07004C01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX299937 ID=CX299937; Name=CX299937; organism=Citrus clementina; type=EST; length=702bp
GGCTGCACGAATTCGGCACGAGGGTAACTGATGCTGCAGTGACATCGTCT
TTGCTTGAATCGGTTGAAAGTTCTGATCTCATTGCATATGGTCTCATACC
AGAATTTGTCGGACGATTTCCAATATTAGTTAGCTTGACAGCACTAACAG
AGGACCAACTTGTTAAGGTCCTCACAGAACCAAAAAATGCTCTGGGTAAG
CAGTATAAGAGATTGTTCAGCATGAACAATGTCAAATTACATTTTACTGA
AAAAGCACTAAGAGTAATTGCCAAAAAAGCTACAGCTAAGAATACTGGTG
CCAGAGGTTTAAGAGCCATACTAGAAAGCATTCTAACTGAAGCCATGTAT
GAGATTCCTGATGTTAAGACGGGAAGTGATGGGGTAGATGCTGTTGTGGT
AGATGAGGAGTCGGTGGGGTCAGTGGATGCCCCTGGATGCGGAGGGAAAA
TTCTACGTGGAGAAGGTGCATTGGAGCGTTATCTAGTTGAAGCCGAGCGG
AAAGAGTCAGCGGAAAATGCATCTGAGAGGGAGTTGCAGGAGAGTGAAGC
AGAGATCTCAACGAGAGCCATGAGCATGTAGAAGTAGAAGCACCACGATG
ATTGTTGAAAGTTGTACAACGCATGTCTAATGTTATTTGTAGAAATCATA
TTCATTAGTTGGTGTAATTATAATCCCCTTGTATTACAGGTTCTTGAATT
CG
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