CX299937
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_BACAA (ATP-dependent Clp protease ATP-binding subunit clpX OS=Bacillus anthracis (strain A0248) GN=clpX PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 6.662e-24 Identity = 52/98 (53.06%), Postives = 74/98 (75.51%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DL+ +GLIPEF+GR P++ +L L ED LV +LT+PKNAL KQ+++L +++V+L F E AL IAKKA + TGARGLR+I+E ++ E M+E+P K Sbjct: 288 DLLRFGLIPEFIGRLPVIANLEPLDEDALVDILTKPKNALVKQFQKLLELDDVELEFEEGALIEIAKKAIERKTGARGLRSIIEGLMLEVMFELPSRK 385
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_BACA2 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Bacillus amyloliquefaciens (strain FZB42) GN=clpX PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 6.662e-24 Identity = 50/95 (52.63%), Postives = 74/95 (77.89%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ +GLIPEF+GR P++ SL L E LV++LT+PKNAL KQYK++ +++V+L F ++AL IAKKA + TGARGLR+I+E I+ + M+++P Sbjct: 288 DLLRFGLIPEFIGRLPVIASLEQLDETALVEILTKPKNALVKQYKKMLELDDVELEFEDEALSEIAKKAIERKTGARGLRSIIEGIMLDVMFDLP 382
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_ANAPZ (ATP-dependent Clp protease ATP-binding subunit clpX OS=Anaplasma phagocytophilum (strain HZ) GN=clpX PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 6.662e-24 Identity = 52/93 (55.91%), Postives = 72/93 (77.42%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYE 353 DL+ +GLIPEF+GR P++ SL L E+ L +VL EPKN+L KQY +LF M+N++L F + AL IA+KA +NTGARGLRAI+ES+L + M++ Sbjct: 284 DLVKFGLIPEFIGRIPVITSLGKLDENTLFRVLVEPKNSLVKQYAKLFEMDNLELKFDDDALMAIARKAVDRNTGARGLRAIMESLLLDFMFD 376
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_ACISJ (ATP-dependent Clp protease ATP-binding subunit clpX OS=Acidovorax sp. (strain JS42) GN=clpX PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 6.662e-24 Identity = 54/97 (55.67%), Postives = 72/97 (74.23%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDV 365 DLI +GLIPE VGR P++ +L L+ED LV++LTEPKNAL KQY +L +M V+L AL+ IA+KA A+ TGARGLR+ILE L M+++P+V Sbjct: 295 DLIKFGLIPELVGRMPVVTALAELSEDALVQILTEPKNALVKQYSKLLAMEGVELEIRPAALKSIARKAIARKTGARGLRSILEQALIGTMFDLPNV 391
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_TERTT (ATP-dependent Clp protease ATP-binding subunit clpX OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=clpX PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 8.700e-24 Identity = 50/95 (52.63%), Postives = 71/95 (74.74%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ YGLIPEFVGR P++ +L L ++ LV +L EPKN+L KQY +LF M NV++ F AL +A+KA + TGARGLR+I+E++L + MY++P Sbjct: 298 DLVRYGLIPEFVGRLPVIATLDELDKEALVTILREPKNSLVKQYAKLFEMENVEVDFRADALEAVAEKAMVRKTGARGLRSIMENVLLDTMYKLP 392
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_SACD2 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=clpX PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 8.700e-24 Identity = 50/95 (52.63%), Postives = 70/95 (73.68%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ YGLIPEFVGR P++ +L L +D LV++L EPKN+L KQY +LF M ++ F + AL +A KA + TGARGLR+I+E++L + MY+IP Sbjct: 298 DLVRYGLIPEFVGRLPVIATLDELDQDALVRILKEPKNSLVKQYSKLFEMEGSEVDFRDDALEAVANKAMERKTGARGLRSIMENVLLDTMYKIP 392
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_PSYWF (ATP-dependent Clp protease ATP-binding subunit clpX OS=Psychrobacter sp. (strain PRwf-1) GN=clpX PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 8.700e-24 Identity = 51/97 (52.58%), Postives = 72/97 (74.23%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDV 365 DLI +GLIPE +GR P++ +L L E+ L+++LTEPKNA+ KQY+ LF M + +L FTE L+ IA KA + TGARGLR+I+E+ L + MYE+P + Sbjct: 307 DLIKFGLIPELIGRLPVIATLEELDEEALMQILTEPKNAIVKQYQYLFEMEDAELSFTEAGLKAIAHKAMERKTGARGLRSIVENALLDTMYELPSM 403
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_NOVAD (ATP-dependent Clp protease ATP-binding subunit clpX OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=clpX PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 8.700e-24 Identity = 52/95 (54.74%), Postives = 71/95 (74.74%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ +GLIPEFVGR P++ +L L + LVK+L EPKNAL KQY +LF + +V L FT+ AL IAKKA + TGARGLR+I+E +L + M+++P Sbjct: 292 DLLKFGLIPEFVGRLPVIATLNDLDIEALVKILKEPKNALVKQYAKLFELEDVTLTFTDDALEAIAKKAIERKTGARGLRSIVEGLLLDTMFDVP 386
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_MARMS (ATP-dependent Clp protease ATP-binding subunit clpX OS=Marinomonas sp. (strain MWYL1) GN=clpX PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 8.700e-24 Identity = 52/95 (54.74%), Postives = 72/95 (75.79%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ +GLIPEFVGR P++ +L+ L E+ L+ +L++PKNAL KQY+ LF + V+L FT ++LR AK A + TGARGLR+ILES L + MYE+P Sbjct: 298 DLVKFGLIPEFVGRLPVVATLSELDEEALMTILSQPKNALVKQYQHLFELEGVELEFTPESLREAAKLALERKTGARGLRSILESALLDCMYELP 392
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_LISW6 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=clpX PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 8.700e-24 Identity = 53/95 (55.79%), Postives = 71/95 (74.74%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ +GLIPEF+GR P++ +L L E LV +LTEPKNAL KQYKR+ +++V+L F AL IAK+A + TGARGLR+I+E I+ E M+EIP Sbjct: 288 DLLKFGLIPEFIGRLPVIATLEQLDEAALVSILTEPKNALVKQYKRMLELDDVELEFEPTALIEIAKEAIERKTGARGLRSIIEQIMLEVMFEIP 382 The following BLAST results are available for this feature:
BLAST of CX299937 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299937 ID=CX299937; Name=CX299937; organism=Citrus clementina; type=EST; length=702bpback to top |