CX299937
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_TREDE (ATP-dependent Clp protease ATP-binding subunit clpX OS=Treponema denticola GN=clpX PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.136e-23 Identity = 49/98 (50.00%), Postives = 74/98 (75.51%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DL+ +GLIPE +GR PI V+L LT++ L ++L EPKNA+ KQ++ F ++NV LHF + A+ IA++A +NTGARGLR+I+E ++ +AM+E P +K Sbjct: 289 DLVKFGLIPELIGRIPIKVALNELTKEDLTRILVEPKNAIIKQFQATFKLDNVDLHFDKDAITAIAQQAIDQNTGARGLRSIVEKLMLDAMFEAPSIK 386
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_STRTD (ATP-dependent Clp protease ATP-binding subunit clpX OS=Streptococcus thermophilus (strain ATCC BAA-491 / LMD-9) GN=clpX PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.136e-23 Identity = 51/98 (52.04%), Postives = 72/98 (73.47%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 D+ +GLIPEF+GR P+L +L LT D LV++LTEP+NAL KQY+ L S + V+L F + AL IA KA + TGARGLR+I+E ++ + M+EIP ++ Sbjct: 288 DIQKFGLIPEFIGRLPVLAALEQLTVDDLVRILTEPRNALVKQYQTLLSYDGVELEFDQDALEAIASKAIERKTGARGLRSIIEEVMMDVMFEIPSLE 385
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_STRT2 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) GN=clpX PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.136e-23 Identity = 51/98 (52.04%), Postives = 72/98 (73.47%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 D+ +GLIPEF+GR P+L +L LT D LV++LTEP+NAL KQY+ L S + V+L F + AL IA KA + TGARGLR+I+E ++ + M+EIP ++ Sbjct: 288 DIQKFGLIPEFIGRLPVLATLEQLTVDDLVRILTEPRNALVKQYQTLLSYDGVELEFDQDALEAIASKAIERKTGARGLRSIIEEVMMDVMFEIPSLE 385
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_STRT1 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Streptococcus thermophilus (strain CNRZ 1066) GN=clpX PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.136e-23 Identity = 51/98 (52.04%), Postives = 72/98 (73.47%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 D+ +GLIPEF+GR P+L +L LT D LV++LTEP+NAL KQY+ L S + V+L F + AL IA KA + TGARGLR+I+E ++ + M+EIP ++ Sbjct: 288 DIQKFGLIPEFIGRLPVLATLEQLTVDDLVRILTEPRNALVKQYQTLLSYDGVELEFDQDALEAIASKAIERKTGARGLRSIIEEVMMDVMFEIPSLE 385
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_PELCD (ATP-dependent Clp protease ATP-binding subunit clpX OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=clpX PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.136e-23 Identity = 52/95 (54.74%), Postives = 71/95 (74.74%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DLI +GLIPEFVGR P++ +L L E+ LV++L EPKNAL KQY++LF M V L FT+ AL +A +A + TGARGLR+I+E+ + + MY+IP Sbjct: 291 DLIRFGLIPEFVGRLPVVATLEELDEESLVRILKEPKNALVKQYQKLFEMEKVHLKFTDGALVAVAAEALKRKTGARGLRSIIENAMLDVMYDIP 385
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_MYCLE (ATP-dependent Clp protease ATP-binding subunit clpX OS=Mycobacterium leprae GN=clpX PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.136e-23 Identity = 53/95 (55.79%), Postives = 69/95 (72.63%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DLI +GLIPEF+GR P++ S+ L + LVK+L+EPKNAL KQY LF M+ V+L FT AL +A +A + TGARGLRAI+E +L MY+IP Sbjct: 294 DLIKFGLIPEFIGRLPVIASVINLDMESLVKILSEPKNALVKQYTWLFEMDGVELEFTNDALEAVADQAIHRGTGARGLRAIMEEVLLPVMYDIP 388
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_MYCLB (ATP-dependent Clp protease ATP-binding subunit clpX OS=Mycobacterium leprae (strain Br4923) GN=clpX PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.136e-23 Identity = 53/95 (55.79%), Postives = 69/95 (72.63%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DLI +GLIPEF+GR P++ S+ L + LVK+L+EPKNAL KQY LF M+ V+L FT AL +A +A + TGARGLRAI+E +L MY+IP Sbjct: 294 DLIKFGLIPEFIGRLPVIASVINLDMESLVKILSEPKNALVKQYTWLFEMDGVELEFTNDALEAVADQAIHRGTGARGLRAIMEEVLLPVMYDIP 388
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_LACS1 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Lactobacillus salivarius subsp. salivarius (strain UCC118) GN=clpX PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.136e-23 Identity = 52/95 (54.74%), Postives = 74/95 (77.89%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ +GLIPEF+GR PIL +L LTE+ LV++LTEPKNAL KQY++L S ++V L F + A++ IA A +NTGARGLR+I+E+ + + M++IP Sbjct: 289 DLLKFGLIPEFIGRLPILTALEKLTEEDLVRILTEPKNALIKQYQKLVSFDDVSLKFEDDAVKEIAHLAIERNTGARGLRSIVEATMRDIMFDIP 383
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_KINRD (ATP-dependent Clp protease ATP-binding subunit clpX OS=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) GN=clpX PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.136e-23 Identity = 48/95 (50.53%), Postives = 73/95 (76.84%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ +GLIPEF+GR PI+ S+ L ++ LV++LT+P+NAL KQY+R+F ++ V+L FT+ AL +A +A + TGARGLRAI+E +L M+++P Sbjct: 294 DLMKFGLIPEFIGRLPIITSVENLDQEALVQILTKPRNALAKQYQRMFELDGVELEFTDDALEAVADQAILRGTGARGLRAIIEEVLLPVMFDVP 388
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_GEOKA (ATP-dependent Clp protease ATP-binding subunit clpX OS=Geobacillus kaustophilus GN=clpX PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.136e-23 Identity = 49/95 (51.58%), Postives = 72/95 (75.79%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ +GLIPEF+GR P++ +L L E L+ +LT+PKNA+ KQY+++ ++ V+L F E ALR IAKKA + TGARGLR+I+E I+ + M+E+P Sbjct: 288 DLLKFGLIPEFIGRLPVITTLEPLDEQALIDILTKPKNAIVKQYQKMLELDGVELEFEEAALREIAKKAIERKTGARGLRSIIEGIMLDVMFELP 382 The following BLAST results are available for this feature:
BLAST of CX299937 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299937 ID=CX299937; Name=CX299937; organism=Citrus clementina; type=EST; length=702bpback to top |