CX299937
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_LEGPA (ATP-dependent Clp protease ATP-binding subunit clpX OS=Legionella pneumophila (strain Paris) GN=clpX PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.938e-23 Identity = 53/98 (54.08%), Postives = 71/98 (72.45%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DLI YGLIPEFVGR P++ +L L E L+ +LT PKNAL KQ++ LF M +L F ++AL IAKKA + GARGLR+ILE+IL + MY++P ++ Sbjct: 292 DLIKYGLIPEFVGRLPVVTTLQELDEAALIDILTRPKNALTKQFQSLFKMEGSELEFRDEALIAIAKKALERKMGARGLRSILENILLDTMYDLPSLE 389
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_LACH4 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Lactobacillus helveticus (strain DPC 4571) GN=clpX PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.938e-23 Identity = 52/98 (53.06%), Postives = 72/98 (73.47%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DL+ +G+IPEF+GR PI+ +L L+ + LV+VLTEPKNAL KQYK+L S++ V L FT+ AL+ IA A +N GARGLR I+E+ + + MY+ P K Sbjct: 288 DLVKFGMIPEFIGRIPIITTLDNLSSEDLVRVLTEPKNALVKQYKKLLSLDGVDLKFTDGALKAIADLAIQRNMGARGLRTIIENSIMDIMYKTPSEK 385
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_HUMAN (ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial OS=Homo sapiens GN=CLPX PE=1 SV=2) HSP 1 Score: 109.383 bits (272), Expect = 1.938e-23 Identity = 52/96 (54.17%), Postives = 74/96 (77.08%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPD 362 DLI +G+IPEFVGR P++V L +L E LV++LTEP+NA+ QY+ LFSM+ +L+ TE AL+ IA+ A + TGARGLR+I+E +L E M+E+P+ Sbjct: 486 DLIEFGMIPEFVGRLPVVVPLHSLDEKTLVQILTEPRNAVIPQYQALFSMDKCELNVTEDALKAIARLALERKTGARGLRSIMEKLLLEPMFEVPN 581
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_CAMJE (ATP-dependent Clp protease ATP-binding subunit clpX OS=Campylobacter jejuni GN=clpX PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.938e-23 Identity = 49/98 (50.00%), Postives = 74/98 (75.51%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DL+ +GLIPE +GR ++ SL L E+ +V++LTEPKNA+ KQY++LF+++ V L F E ALR IA+ A + TGARGLR+I+E ++ + M+E+P+ K Sbjct: 295 DLVHFGLIPELIGRLHVIASLNELNEEDMVRILTEPKNAIIKQYQKLFAIDGVNLKFEEDALRAIAQLALERKTGARGLRSIIEEMMVDLMFELPEYK 392
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_STACT (ATP-dependent Clp protease ATP-binding subunit clpX OS=Staphylococcus carnosus (strain TM300) GN=clpX PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.531e-23 Identity = 53/95 (55.79%), Postives = 71/95 (74.74%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL +YGLIPEF+GR PI+ +L L L +LT+PKNAL KQYK++ +++V+L FTE+AL IA+KA + TGARGLR+I+E L E MY+IP Sbjct: 288 DLQSYGLIPEFIGRIPIVANLETLDIAALKNILTQPKNALVKQYKKMLELDHVELEFTEEALTAIAEKAIERKTGARGLRSIIEESLIEIMYDIP 382
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_SALTO (ATP-dependent Clp protease ATP-binding subunit clpX OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) GN=clpX PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.531e-23 Identity = 48/95 (50.53%), Postives = 71/95 (74.74%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 D++ +GLIPEF+GR P++ ++ +L LV++LTEP+NAL +QY+RLF ++ V+L F + AL IA +A + TGARGLRAI+E +L MYE+P Sbjct: 293 DMLKFGLIPEFIGRLPVITNVRSLDRPALVQILTEPRNALVRQYQRLFELDGVELEFEQSALEAIADQAMLRGTGARGLRAIMEEVLLSVMYEVP 387
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_SALAI (ATP-dependent Clp protease ATP-binding subunit clpX OS=Salinispora arenicola (strain CNS-205) GN=clpX PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.531e-23 Identity = 47/95 (49.47%), Postives = 71/95 (74.74%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 D++ +GLIPEF+GR P++ ++ +L LV++LTEP+NAL +QY+RLF ++ V+L F + AL +A +A + TGARGLRAI+E +L MYE+P Sbjct: 293 DMLKFGLIPEFIGRLPVITNVRSLDRSALVRILTEPRNALVRQYQRLFELDGVELEFEQPALEAVADQAMLRGTGARGLRAIMEEVLLSVMYEVP 387
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_NITMU (ATP-dependent Clp protease ATP-binding subunit clpX OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=clpX PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.531e-23 Identity = 51/99 (51.52%), Postives = 75/99 (75.76%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM-NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DL+ YGLIPEFVGR P++ +L L E L+++LTEP+NAL KQY+++F M + L F E+AL+ IA+KA + TGARGLR+ILE+ L + M+++P ++ Sbjct: 295 DLVKYGLIPEFVGRLPVVATLEELDEAALIQILTEPRNALIKQYQKMFHMEGGIDLEFREQALKAIARKALVRKTGARGLRSILEAALLDTMFDLPSLE 393
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_GEOSL (ATP-dependent Clp protease ATP-binding subunit clpX OS=Geobacter sulfurreducens GN=clpX PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.531e-23 Identity = 51/95 (53.68%), Postives = 72/95 (75.79%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL+ +G IPEF+GR P+L +L L E +V++L EPKNAL KQY++LF M +VKL FT+ +L I+++A + TGARGLR+ILE+ + + MYEIP Sbjct: 291 DLLKFGFIPEFIGRLPVLATLRELDETAMVQILKEPKNALIKQYQKLFEMEHVKLKFTDGSLVAISREALKRKTGARGLRSILENAMLDIMYEIP 385
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_BURP8 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=clpX PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.531e-23 Identity = 53/98 (54.08%), Postives = 70/98 (71.43%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DLI +GLIPE +GR P++ +L L E L+K+L EPKNAL KQY +LF+M V+L AL+ IA+KA + TGARGLR+ILE L + MYE+P +K Sbjct: 294 DLIKFGLIPELIGRLPVVATLGKLDETALMKILVEPKNALVKQYHKLFNMERVELEIRPAALQAIARKAIRRKTGARGLRSILEQALLDVMYELPAMK 391 The following BLAST results are available for this feature:
BLAST of CX299937 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299937 ID=CX299937; Name=CX299937; organism=Citrus clementina; type=EST; length=702bpback to top |