CX299937
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_BURVG (ATP-dependent Clp protease ATP-binding subunit clpX OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=clpX PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.639e-23 Identity = 51/98 (52.04%), Postives = 70/98 (71.43%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DLI +GLIPE +GR P++ +L L E L+K+L EPKNAL KQY +LF+M V+L AL+ +A+KA + TGARGLR+I+E L + MYE+P +K Sbjct: 294 DLIKFGLIPELIGRLPVVATLGKLDEAALMKILVEPKNALVKQYHKLFAMERVELEIRPAALQAVARKAIRRKTGARGLRSIIEQALLDVMYELPTMK 391
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_BURM1 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=clpX PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.639e-23 Identity = 51/98 (52.04%), Postives = 70/98 (71.43%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DLI +GLIPE +GR P++ +L L E L+K+L EPKNAL KQY +LF+M V+L AL+ +A+KA + TGARGLR+I+E L + MYE+P +K Sbjct: 294 DLIKFGLIPELIGRLPVVATLGKLDEAALMKILVEPKNALVKQYHKLFAMERVELEIRPAALQAVARKAIRRKTGARGLRSIIEQALLDVMYELPTMK 391
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_STAHJ (ATP-dependent Clp protease ATP-binding subunit clpX OS=Staphylococcus haemolyticus (strain JCSC1435) GN=clpX PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.365e-23 Identity = 49/95 (51.58%), Postives = 71/95 (74.74%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL +YGLIPEF+GR PI+ +L L + L +LT+PKNAL KQY ++ ++NV+L FTE+AL +++KA + TGARGLR+I+E L + MY++P Sbjct: 288 DLQSYGLIPEFIGRVPIVANLETLDVEALKNILTQPKNALVKQYTKMLELDNVELEFTEEALAAVSEKAIERKTGARGLRSIIEEALIDIMYDVP 382
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_EXIS2 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=clpX PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.365e-23 Identity = 51/95 (53.68%), Postives = 72/95 (75.79%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 359 DL +GLIPEF+GR P++ +L L E+ LV++LT+PKNAL KQYK++ +++V+L FTE AL IAK A + TGARGLR+I+E + + M+EIP Sbjct: 288 DLQKFGLIPEFIGRLPVMATLEPLDEEALVQILTKPKNALVKQYKKMLQLDDVELDFTEDALVEIAKLAIERKTGARGLRSIIEETMLDIMFEIP 382
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_DESVV (ATP-dependent Clp protease ATP-binding subunit clpX OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=clpX PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.365e-23 Identity = 46/98 (46.94%), Postives = 73/98 (74.49%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DL+ +GLIPEF+GR P++ + L E+ L+++LTEPKNAL +QY++LF ++ V L FT AL+ IA +A + TGARGLR ++E+++ + MY +P ++ Sbjct: 290 DLVKFGLIPEFIGRIPVVTHVDELGEEDLIRILTEPKNALVRQYQKLFELDKVTLRFTANALKSIASQAIERKTGARGLRNVMENVMLDIMYSLPTLE 387
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_DESVH (ATP-dependent Clp protease ATP-binding subunit clpX OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=clpX PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.365e-23 Identity = 46/98 (46.94%), Postives = 73/98 (74.49%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DL+ +GLIPEF+GR P++ + L E+ L+++LTEPKNAL +QY++LF ++ V L FT AL+ IA +A + TGARGLR ++E+++ + MY +P ++ Sbjct: 290 DLVKFGLIPEFIGRIPVVTHVDELGEEDLIRILTEPKNALVRQYQKLFELDKVTLRFTANALKSIASQAIERKTGARGLRNVMENVMLDIMYSLPTLE 387
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_BURXL (ATP-dependent Clp protease ATP-binding subunit clpX OS=Burkholderia xenovorans (strain LB400) GN=clpX PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.365e-23 Identity = 51/98 (52.04%), Postives = 70/98 (71.43%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DLI +GLIPE +GR P++ +L L E L+K+L EPKNAL KQY +LF+M V+L AL+ +A+KA + TGARGLR+ILE L + MY++P +K Sbjct: 294 DLIKFGLIPELIGRLPVVATLGKLDEVALMKILVEPKNALVKQYHKLFNMERVELEIRPAALQAVARKAIRRKTGARGLRSILEQALLDVMYDLPQMK 391
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_BURS3 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Burkholderia sp. (strain 383) GN=clpX PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.365e-23 Identity = 51/98 (52.04%), Postives = 70/98 (71.43%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DLI +GLIPE +GR P++ +L L E L+K+L EPKNAL KQY +LF+M V+L AL+ +A+KA + TGARGLR+I+E L + MYE+P +K Sbjct: 294 DLIKFGLIPELIGRLPVVATLGKLDEAALMKILVEPKNALVKQYHKLFAMERVELEIRPGALQAVARKAIRRKTGARGLRSIIEQALLDVMYELPTMK 391
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_BURPP (ATP-dependent Clp protease ATP-binding subunit clpX OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=clpX PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.365e-23 Identity = 51/98 (52.04%), Postives = 70/98 (71.43%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DLI +GLIPE +GR P++ +L L E L+K+L EPKNAL KQY +LF+M V+L AL+ +A+KA + TGARGLR+ILE L + MY++P +K Sbjct: 294 DLIKFGLIPELIGRLPVVATLGKLDEVALMKILVEPKNALVKQYHKLFNMERVELEIRPAALQAVARKAIRRKTGARGLRSILEQALLDVMYDLPQMK 391
BLAST of CX299937 vs. ExPASy Swiss-Prot
Match: CLPX_BURCJ (ATP-dependent Clp protease ATP-binding subunit clpX OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=clpX PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.365e-23 Identity = 51/98 (52.04%), Postives = 70/98 (71.43%), Query Frame = 3 Query: 75 DLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 368 DLI +GLIPE +GR P++ +L L E L+K+L EPKNAL KQY +LF+M V+L AL+ +A+KA + TGARGLR+I+E L + MYE+P +K Sbjct: 294 DLIKFGLIPELIGRLPVVATLGKLDEAALMKILVEPKNALVKQYHKLFAMERVELEIRPGALQAVARKAIRRKTGARGLRSIIEQALLDVMYELPTMK 391 The following BLAST results are available for this feature:
BLAST of CX299937 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX299937 ID=CX299937; Name=CX299937; organism=Citrus clementina; type=EST; length=702bpback to top |