CX299941
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX299941 vs. ExPASy Swiss-Prot
Match: SSG2_PEA (Granule-bound starch synthase 2, chloroplastic/amyloplastic OS=Pisum sativum PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.090e-11 Identity = 41/103 (39.81%), Postives = 56/103 (54.37%), Query Frame = 1 Query: 16 SRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG--TQALAEMMKNGMAQDLSWKGPAKKWEETLL 318 SRFEPCGL QL+AM YGTVP+V GGL DTV+ F F D + + + L TY ++ + + GM+QDLSW A+++EE L+ Sbjct: 648 SRFEPCGLNQLYAMSYGTVPVVHGVGGLRDTVQP-FNPFDESGVG---WTFDRAEANKLMAALWNCLLTYKDYKKSWEGIQERGMSQDLSWDNAAQQYEEVLV 746
BLAST of CX299941 vs. ExPASy Swiss-Prot
Match: GLGA_RHOPB (Glycogen synthase OS=Rhodopseudomonas palustris (strain BisB18) GN=glgA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.954e-11 Identity = 39/107 (36.45%), Postives = 58/107 (54.21%), Query Frame = 1 Query: 16 SRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMK-NGMAQDLSWKGPAKKWEETLLNLEVA 333 SRFEPCGL QL A+RYG VP+VA GGL DTV + + + PV ++ + + A Y +A + ++ NGM D+SW+ PA+ + + +L A Sbjct: 377 SRFEPCGLTQLCALRYGAVPVVARVGGLSDTVVDA-NEMAIAAGVATGVQFSPVTGDMLAAALSKTRALYADRAAWQALQHNGMTADVSWRNPAQHYAQLYRSLLAA 482
BLAST of CX299941 vs. ExPASy Swiss-Prot
Match: GLGA_PROMA (Glycogen synthase OS=Prochlorococcus marinus GN=glgA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.954e-11 Identity = 50/135 (37.04%), Postives = 68/135 (50.37%), Query Frame = 1 Query: 16 SRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV------EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAG-SEPGIDGEEIAPLAKENVATP 399 SRFEPCG+ QL AMRYG++PIV + GGLVDTV + TGF F +P+D + VR A ++ E+ K M Q SW+ A ++E + EV+G EP D E+ + A P Sbjct: 355 SRFEPCGISQLLAMRYGSIPIVRNVGGLVDTVIPHDPINKSGTGFCFDRF-------EPIDF--YTALVRSWEAFRHRRSWKELQKRAMTQMYSWERSAMEYE--TMYKEVSGYKEPSPDAIEVEKFSVGQDADP 478
BLAST of CX299941 vs. ExPASy Swiss-Prot
Match: GLGA_FERNB (Glycogen synthase OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=glgA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.954e-11 Identity = 40/97 (41.24%), Postives = 58/97 (59.79%), Query Frame = 1 Query: 16 SRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGT-QALAEMMKNGMAQDLSWKGPAKKW 303 SR+EPCGL Q++++RYGT+PIV TGGL DTV+E + G+ E DP A + + RA+ Y + + ++KN M DLSW AK++ Sbjct: 380 SRYEPCGLGQMYSLRYGTIPIVRYTGGLADTVKEYNPETKEGN-GFGFEGFDP---AHLLKAMARAIYFYNSKEDWNTLIKNAMTMDLSWDKSAKEY 472
BLAST of CX299941 vs. ExPASy Swiss-Prot
Match: GLGA_DEIDV (Glycogen synthase OS=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) GN=glgA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.954e-11 Identity = 41/97 (42.27%), Postives = 54/97 (55.67%), Query Frame = 1 Query: 16 SRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSWKGPAKKW 303 SRFEPCGL Q+ AMRYGT+P+V TGGLVDTV GF+ P A+ ++A A + Q+ E + MA D SW GPA+++ Sbjct: 351 SRFEPCGLSQMIAMRYGTLPVVRETGGLVDTVPPD-VGFRF----------QPATPEALVEACQQARAAFEDQSDWEARVARAMALDFSWDGPAREY 436 The following BLAST results are available for this feature:
BLAST of CX299941 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299941 ID=CX299941; Name=CX299941; organism=Citrus clementina; type=EST; length=680bpback to top |