CX299946
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX299946 vs. ExPASy Swiss-Prot
Match: RL36_XENTR (60S ribosomal protein L36 OS=Xenopus tropicalis GN=rpl36 PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 5.956e-26 Identity = 58/92 (63.04%), Postives = 69/92 (75.00%), Query Frame = 3 Query: 96 VGLNKGHVVTKKELPPRPSDRKGKTSKRVHFVKNLIREVAGFAPYERRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKMRSA 371 VGLNKGH VTK PR R+G+ +K FV+++IREV GFAPYERR ELLKV KDKRALK K+++GTH RAK+KREE+SN L MR A Sbjct: 9 VGLNKGHRVTKNVTKPRHCRRRGRLTKHTKFVRDMIREVCGFAPYERRAMELLKVSKDKRALKFIKKRIGTHIRAKRKREELSNVLAAMRKA 100
BLAST of CX299946 vs. ExPASy Swiss-Prot
Match: RL36_XENLA (60S ribosomal protein L36 OS=Xenopus laevis GN=rpl36 PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 5.956e-26 Identity = 58/92 (63.04%), Postives = 69/92 (75.00%), Query Frame = 3 Query: 96 VGLNKGHVVTKKELPPRPSDRKGKTSKRVHFVKNLIREVAGFAPYERRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKMRSA 371 VGLNKGH VTK PR R+G+ +K FV+++IREV GFAPYERR ELLKV KDKRALK K+++GTH RAK+KREE+SN L MR A Sbjct: 9 VGLNKGHRVTKNVTKPRHCRRRGRLTKHTKFVRDMIREVCGFAPYERRAMELLKVSKDKRALKFIKKRIGTHIRAKRKREELSNVLAAMRKA 100
BLAST of CX299946 vs. ExPASy Swiss-Prot
Match: RL36_DANRE (60S ribosomal protein L36 OS=Danio rerio GN=rpl36 PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 5.956e-26 Identity = 58/97 (59.79%), Postives = 71/97 (73.20%), Query Frame = 3 Query: 96 VGLNKGHVVTKKELPPRPSDRKGKTSKRVHFVKNLIREVAGFAPYERRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKMRSAGGAEK 386 VGLNKGH VTK P+ S R+G+ +K F ++LIREV GFAPYERR ELLKV KDKRALK K+++GTH RAK+KREE+SN L MR A ++ Sbjct: 9 VGLNKGHKVTKNVSKPKHSRRRGRLTKHAKFARDLIREVCGFAPYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNTLAAMRKAAAKKE 105
BLAST of CX299946 vs. ExPASy Swiss-Prot
Match: RL36_LAPHA (60S ribosomal protein L36 OS=Lapemis hardwickii GN=RPL36 PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 7.779e-26 Identity = 58/92 (63.04%), Postives = 69/92 (75.00%), Query Frame = 3 Query: 96 VGLNKGHVVTKKELPPRPSDRKGKTSKRVHFVKNLIREVAGFAPYERRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKMRSA 371 VGLNKGH VTK PR R+G+ +K FV+++IREV GFAPYERR ELLKV KDKRALK K+++GTH RAK+KREE+SN L MR A Sbjct: 9 VGLNKGHKVTKNVSKPRHCRRRGRLTKHTKFVRDMIREVCGFAPYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVLAAMRKA 100
BLAST of CX299946 vs. ExPASy Swiss-Prot
Match: RL36_RAT (60S ribosomal protein L36 OS=Rattus norvegicus GN=Rpl36 PE=1 SV=2) HSP 1 Score: 116.701 bits (291), Expect = 1.016e-25 Identity = 58/92 (63.04%), Postives = 69/92 (75.00%), Query Frame = 3 Query: 96 VGLNKGHVVTKKELPPRPSDRKGKTSKRVHFVKNLIREVAGFAPYERRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKMRSA 371 VGLNKGH VTK PR S R+G+ +K FV+++IREV FAPYERR ELLKV KDKRALK K+++GTH RAK+KREE+SN L MR A Sbjct: 9 VGLNKGHKVTKNVSKPRHSRRRGRLTKHTKFVRDMIREVCAFAPYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVLAAMRKA 100
BLAST of CX299946 vs. ExPASy Swiss-Prot
Match: RL36B_SCHPO (60S ribosomal protein L36-B OS=Schizosaccharomyces pombe GN=rpl36b PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.733e-25 Identity = 56/95 (58.95%), Postives = 75/95 (78.95%), Query Frame = 3 Query: 87 GLFVGLNKGHVVTKKELPPRPSDRKGKTSKRVHFVKNLIREVAGFAPYERRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKMRSA 371 GL VGLNKG +TK++LP RPS RKG SKR FV++++REVAGFAPYERR+ EL++ +DKRA K+AK++LGT KRAK K EE+++ ++ R A Sbjct: 4 GLVVGLNKGKTLTKRQLPERPSRRKGHLSKRTAFVRSIVREVAGFAPYERRVMELIRNSQDKRARKLAKKRLGTLKRAKGKIEELTSVIQSSRLA 98
BLAST of CX299946 vs. ExPASy Swiss-Prot
Match: RL36_CHICK (60S ribosomal protein L36 OS=Gallus gallus GN=RPL36 PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 3.860e-25 Identity = 57/92 (61.96%), Postives = 69/92 (75.00%), Query Frame = 3 Query: 96 VGLNKGHVVTKKELPPRPSDRKGKTSKRVHFVKNLIREVAGFAPYERRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKMRSA 371 VGLNKG+ VTK PR R+G+ +K FV+++IREV GFAPYERR ELLKV KDKRALK K+++GTH RAK+KREE+SN L MR A Sbjct: 9 VGLNKGYKVTKNVSKPRHCRRRGRLTKHTKFVRDMIREVCGFAPYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVLAAMRKA 100
BLAST of CX299946 vs. ExPASy Swiss-Prot
Match: RL36_ICTPU (60S ribosomal protein L36 OS=Ictalurus punctatus GN=rpl36 PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 8.600e-25 Identity = 57/97 (58.76%), Postives = 70/97 (72.16%), Query Frame = 3 Query: 96 VGLNKGHVVTKKELPPRPSDRKGKTSKRVHFVKNLIREVAGFAPYERRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKMRSAGGAEK 386 VGL KGH VTK P+ S R G+ +K FV+++IREV GFAPYERR ELLKV KDKRALK K+++GTH RAK+KREE+SN L MR A ++ Sbjct: 9 VGLKKGHPVTKNVTKPKHSRRGGRLTKHSKFVRDMIREVCGFAPYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNILAAMRKAAAKKE 105
BLAST of CX299946 vs. ExPASy Swiss-Prot
Match: RL36_MOUSE (60S ribosomal protein L36 OS=Mus musculus GN=Rpl36 PE=2 SV=2) HSP 1 Score: 110.538 bits (275), Expect = 7.281e-24 Identity = 55/92 (59.78%), Postives = 66/92 (71.74%), Query Frame = 3 Query: 96 VGLNKGHVVTKKELPPRPSDRKGKTSKRVHFVKNLIREVAGFAPYERRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKMRSA 371 VGLNKGH VTK PR S R+ + + FV+++IREV GFAPYERR ELLKV K KRALK K+++GTH RAK+KREE+SN L M A Sbjct: 9 VGLNKGHKVTKNVSKPRHSRRRSRLTNHTKFVRDMIREVCGFAPYERRAMELLKVSKSKRALKFIKKRVGTHIRAKRKREELSNVLAAMEEA 100
BLAST of CX299946 vs. ExPASy Swiss-Prot
Match: RL36_CAEEL (60S ribosomal protein L36 OS=Caenorhabditis elegans GN=rpl-36 PE=1 SV=3) HSP 1 Score: 110.153 bits (274), Expect = 9.509e-24 Identity = 51/95 (53.68%), Postives = 67/95 (70.53%), Query Frame = 3 Query: 87 GLFVGLNKGHVVTKKELPPRPSDRKGKTSKRVHFVKNLIREVAGFAPYERRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKMRSA 371 GL VGLNKGH T+ + R + KG SK+ V+ L+RE+ GFAPYERR+ E+L++ KDKRALK KR++GTH+RAK KREE+ N + R A Sbjct: 8 GLAVGLNKGHAATQLPVKQRQNRHKGVASKKTKIVRELVREITGFAPYERRVLEMLRISKDKRALKFLKRRIGTHRRAKGKREELQNVIIAQRKA 102 The following BLAST results are available for this feature:
BLAST of CX299946 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299946 ID=CX299946; Name=CX299946; organism=Citrus clementina; type=EST; length=639bpback to top |