CX299946
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX299946 vs. ExPASy Swiss-Prot
Match: RL36_TRIHM (60S ribosomal protein L36 OS=Trichoderma hamatum GN=rpl36 PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.793e-22 Identity = 55/104 (52.88%), Postives = 72/104 (69.23%), Query Frame = 3 Query: 63 MAPKQP-NTGLFVGLNKGHVVTKKELPPRPSDRKGKTSKRVHFVKNLIREVAGFAPYERRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKMRSA 371 MA + P TGL VGLNKGH T + + PR S KG SKR FV+ +++EVAG APYERR+ ELL+ KDKRA K+AK++LGT RAK+K +E+ + + R A Sbjct: 1 MAKEAPAKTGLAVGLNKGHKTTARVVKPRVSRTKGHLSKRTAFVREVVKEVAGLAPYERRVIELLRNSKDKRARKLAKKRLGTFGRAKRKVDELQRVIAESRRA 104
BLAST of CX299946 vs. ExPASy Swiss-Prot
Match: RL36_CANAL (60S ribosomal protein L36 OS=Candida albicans GN=RPL36 PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 9.840e-21 Identity = 47/94 (50.00%), Postives = 70/94 (74.47%), Query Frame = 3 Query: 84 TGLFVGLNKGHVVTKKELPPRPSDRKGKTSKRVHFVKNLIREVAGFAPYERRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKMR 365 +G+ G+NKG T KE+ P+ S RKG +S+R FV+++++EVAG APYERR+ EL++ +KRA K+AK++LGTHKRA +K EEM+ + + R Sbjct: 4 SGIAAGVNKGRKTTAKEVAPKISYRKGASSQRTVFVRSIVKEVAGLAPYERRLIELIRNAGEKRAKKLAKKRLGTHKRALRKVEEMTQVIAESR 97
BLAST of CX299946 vs. ExPASy Swiss-Prot
Match: RL36_DROME (60S ribosomal protein L36 OS=Drosophila melanogaster GN=RpL36 PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.088e-19 Identity = 52/104 (50.00%), Postives = 67/104 (64.42%), Query Frame = 3 Query: 90 LFVGLNKGHVVTKKELPPRPSDRKGK----------TSKRVHFVKNLIREVAGFAPYERRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKMRSA 371 L +GLNKGH +K D+K K ++ F+++L+REV G APYE+R ELLKV KDKRALK KR+LGTH RAK+KREE+SN L ++R A Sbjct: 7 LAIGLNKGHKTSKIRNVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREVVGHAPYEKRTMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNILTQLRKA 110
BLAST of CX299946 vs. ExPASy Swiss-Prot
Match: RL36X_HUMAN (Putative 60S ribosomal protein L36-like 1 OS=Homo sapiens PE=5 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.134e-19 Identity = 47/88 (53.41%), Postives = 60/88 (68.18%), Query Frame = 3 Query: 90 LFVGLNKGHVVTKKELPPRPSDRKGKTSKRVHFVKNLIREVAGFAPYERRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNAL 353 + VGLNKGH +TK PR S G+ +K V+ +I+EV GF PYER ELLKV KDK+ALK K+++GTH K+KREE+SN L Sbjct: 7 MVVGLNKGHKLTKNLSKPRHSRSLGRPTKHTKCVRGMIQEVCGFTPYERCTMELLKVSKDKQALKFIKKRVGTHIHTKRKREELSNVL 94
BLAST of CX299946 vs. ExPASy Swiss-Prot
Match: RL36B_YEAST (60S ribosomal protein L36-B OS=Saccharomyces cerevisiae GN=RPL36B PE=1 SV=3) HSP 1 Score: 94.3597 bits (233), Expect = 5.399e-19 Identity = 46/94 (48.94%), Postives = 66/94 (70.21%), Query Frame = 3 Query: 84 TGLFVGLNKGHVVTKKELPPRPSDRKGKTSKRVHFVKNLIREVAGFAPYERRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKMR 365 TG+ +GLNKG VT+ P+ S +KG S R FV++L+RE+AG +PYERR+ +L++ +KRA KVAK++LG+ RAK K EEM+N + R Sbjct: 5 TGIAIGLNKGKKVTQMTPAPKISYKKGAASNRTKFVRSLVREIAGLSPYERRLIDLIRNSGEKRARKVAKKRLGSFTRAKAKVEEMNNIIAASR 98
BLAST of CX299946 vs. ExPASy Swiss-Prot
Match: RL36A_YEAST (60S ribosomal protein L36-A OS=Saccharomyces cerevisiae GN=RPL36A PE=1 SV=3) HSP 1 Score: 93.9745 bits (232), Expect = 7.052e-19 Identity = 46/94 (48.94%), Postives = 65/94 (69.15%), Query Frame = 3 Query: 84 TGLFVGLNKGHVVTKKELPPRPSDRKGKTSKRVHFVKNLIREVAGFAPYERRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKMR 365 TG+ +GLNKG VT P+ S +KG S R FV++L+RE+AG +PYERR+ +L++ +KRA KVAK++LG+ RAK K EEM+N + R Sbjct: 5 TGIAIGLNKGKKVTSMTPAPKISYKKGAASNRTKFVRSLVREIAGLSPYERRLIDLIRNSGEKRARKVAKKRLGSFTRAKAKVEEMNNIIAASR 98
BLAST of CX299946 vs. ExPASy Swiss-Prot
Match: RL36_DICDI (60S ribosomal protein L36 OS=Dictyostelium discoideum GN=rpl36 PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.571e-18 Identity = 45/92 (48.91%), Postives = 69/92 (75.00%), Query Frame = 3 Query: 84 TGLFVGLNKGHVVTKKELPPRPSDRKGKTSKRVHFVKNLIREVAGFAPYERRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRK 359 +G+ G NKGH V K+ + + +K +KRV ++++IRE++GF+PYERR++ELLK G DKRALKVAK++LG+ + KKKR++++N RK Sbjct: 12 SGIIKGFNKGHAVAKRTVTS--TFKKQVVTKRVAAIRDVIREISGFSPYERRVSELLKSGLDKRALKVAKKRLGSIQAGKKKRDDIANINRK 101 The following BLAST results are available for this feature:
BLAST of CX299946 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX299946 ID=CX299946; Name=CX299946; organism=Citrus clementina; type=EST; length=639bpback to top |