CX299948
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RK2_ACOAM (50S ribosomal protein L2, chloroplastic OS=Acorus americanus GN=rpl2-A PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 2.217e-39 Identity = 80/82 (97.56%), Postives = 82/82 (100.00%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATL+LPSGEVRLISKNCSATVGQVGNVGANQ+SLGRAGSKCWLGKRPVVRGV Sbjct: 140 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLRLPSGEVRLISKNCSATVGQVGNVGANQQSLGRAGSKCWLGKRPVVRGV 221
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RK2B_SOYBN (50S ribosomal protein L2-B, chloroplastic OS=Glycine max GN=rpl2-B PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 2.217e-39 Identity = 80/82 (97.56%), Postives = 81/82 (98.78%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVG NQK+LGRAGSKCWLGKRPVVRGV Sbjct: 140 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKNLGRAGSKCWLGKRPVVRGV 221
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RK2B_LIRTU (50S ribosomal protein L2-B, chloroplastic OS=Liriodendron tulipifera GN=rpl2-B PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 2.217e-39 Identity = 80/82 (97.56%), Postives = 81/82 (98.78%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATL+LPSGEVRLISKNCSATVGQVGNVG NQKSLGRAGSKCWLGKRPVVRGV Sbjct: 140 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLRLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGV 221
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RK2B_CHLSC (50S ribosomal protein L2-B, chloroplastic OS=Chloranthus spicatus GN=rpl2-B PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 2.217e-39 Identity = 80/82 (97.56%), Postives = 81/82 (98.78%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATL+LPSGEVRLISKNCSATVGQVGNVG NQKSLGRAGSKCWLGKRPVVRGV Sbjct: 140 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLRLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGV 221
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RK2A_SOYBN (50S ribosomal protein L2-A, chloroplastic OS=Glycine max GN=rpl2-A PE=3 SV=2) HSP 1 Score: 160.614 bits (405), Expect = 2.217e-39 Identity = 80/82 (97.56%), Postives = 81/82 (98.78%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVG NQK+LGRAGSKCWLGKRPVVRGV Sbjct: 140 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKNLGRAGSKCWLGKRPVVRGV 221
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RK2A_LIRTU (50S ribosomal protein L2-A, chloroplastic OS=Liriodendron tulipifera GN=rpl2-A PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 2.217e-39 Identity = 80/82 (97.56%), Postives = 81/82 (98.78%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATL+LPSGEVRLISKNCSATVGQVGNVG NQKSLGRAGSKCWLGKRPVVRGV Sbjct: 140 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLRLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGV 221
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RK2A_CHLSC (50S ribosomal protein L2-A, chloroplastic OS=Chloranthus spicatus GN=rpl2-A PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 2.217e-39 Identity = 80/82 (97.56%), Postives = 81/82 (98.78%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATL+LPSGEVRLISKNCSATVGQVGNVG NQKSLGRAGSKCWLGKRPVVRGV Sbjct: 142 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLRLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGV 223
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RK2_PHAVU (50S ribosomal protein L2, chloroplastic OS=Phaseolus vulgaris GN=rpl2-A PE=3 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 2.895e-39 Identity = 79/82 (96.34%), Postives = 81/82 (98.78%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVG NQK+LGRAGSKCWLGKRP+VRGV Sbjct: 140 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKNLGRAGSKCWLGKRPIVRGV 221
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RK2_PHAAN (50S ribosomal protein L2, chloroplastic OS=Phaseolus angularis GN=rpl2 PE=3 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 2.895e-39 Identity = 79/82 (96.34%), Postives = 81/82 (98.78%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVG NQK+LGRAGSKCWLGKRP+VRGV Sbjct: 141 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKNLGRAGSKCWLGKRPIVRGV 222
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RK2_MANES (50S ribosomal protein L2, chloroplastic OS=Manihot esculenta GN=rpl2-A PE=3 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 2.895e-39 Identity = 80/82 (97.56%), Postives = 80/82 (97.56%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGN G NQKSLGRAGSKCWLGKRPVVRGV Sbjct: 143 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNTGVNQKSLGRAGSKCWLGKRPVVRGV 224 The following BLAST results are available for this feature:
BLAST of CX299948 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299948 ID=CX299948; Name=CX299948; organism=Citrus clementina; type=EST; length=249bpback to top |