CX299948
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RK2_CUSEX (50S ribosomal protein L2, plastid OS=Cuscuta exaltata GN=rpl2 PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 1.345e-36 Identity = 76/82 (92.68%), Postives = 79/82 (96.34%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HN+EIT GKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVG NQKSLGRAG++ WLGKRPVVRGV Sbjct: 140 HNLEITRGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGAQRWLGKRPVVRGV 221
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RK2_SORBI (50S ribosomal protein L2, chloroplastic OS=Sorghum bicolor GN=rpl2-A PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 2.294e-36 Identity = 74/82 (90.24%), Postives = 78/82 (95.12%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HNIEIT G+GGQLARAAGAVAKLIAKEGK ATL+LPSGEVRL+S+NC ATVGQVGNVG NQKSLGRAGSKCWLGKRPVVRGV Sbjct: 138 HNIEITRGRGGQLARAAGAVAKLIAKEGKLATLRLPSGEVRLVSQNCLATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGV 219
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RK2_SACOF (50S ribosomal protein L2, chloroplastic OS=Saccharum officinarum GN=rpl2-A PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 2.294e-36 Identity = 74/82 (90.24%), Postives = 78/82 (95.12%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HNIEIT G+GGQLARAAGAVAKLIAKEGK ATL+LPSGEVRL+S+NC ATVGQVGNVG NQKSLGRAGSKCWLGKRPVVRGV Sbjct: 140 HNIEITRGRGGQLARAAGAVAKLIAKEGKLATLRLPSGEVRLVSQNCLATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGV 221
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RK2_SACHY (50S ribosomal protein L2, chloroplastic OS=Saccharum hybrid GN=rpl2-A PE=2 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 2.294e-36 Identity = 74/82 (90.24%), Postives = 78/82 (95.12%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HNIEIT G+GGQLARAAGAVAKLIAKEGK ATL+LPSGEVRL+S+NC ATVGQVGNVG NQKSLGRAGSKCWLGKRPVVRGV Sbjct: 140 HNIEITRGRGGQLARAAGAVAKLIAKEGKLATLRLPSGEVRLVSQNCLATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGV 221
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RK2_MAIZE (50S ribosomal protein L2, chloroplastic OS=Zea mays GN=rpl2-A PE=2 SV=2) HSP 1 Score: 150.599 bits (379), Expect = 2.294e-36 Identity = 74/82 (90.24%), Postives = 78/82 (95.12%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HNIEIT G+GGQLARAAGAVAKLIAKEGK ATL+LPSGEVRL+S+NC ATVGQVGNVG NQKSLGRAGSKCWLGKRPVVRGV Sbjct: 140 HNIEITRGRGGQLARAAGAVAKLIAKEGKLATLRLPSGEVRLVSQNCLATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGV 221
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RK2_JASNU (50S ribosomal protein L2, chloroplastic OS=Jasminum nudiflorum GN=rpl2-A PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 2.996e-36 Identity = 76/82 (92.68%), Postives = 78/82 (95.12%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HNIEITLGKGGQL RAAGAVAKLIAKEGKSATLKLPSGEVRLIS+NCSATVGQVGNVGA KSLG+AGSK WLGKRPVVRGV Sbjct: 140 HNIEITLGKGGQLVRAAGAVAKLIAKEGKSATLKLPSGEVRLISQNCSATVGQVGNVGAKHKSLGKAGSKRWLGKRPVVRGV 221
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RK2_PELHO (50S ribosomal protein L2, chloroplastic OS=Pelargonium hortorum GN=rpl2-A PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 3.913e-36 Identity = 75/82 (91.46%), Postives = 79/82 (96.34%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HNIEITLGKGGQLARAAGAVAKLI+KEGKSA +KLPSGEVRLIS+NCSATVGQVGNVG N+KSLGRAGSK WLGKRPVVRGV Sbjct: 140 HNIEITLGKGGQLARAAGAVAKLISKEGKSAAVKLPSGEVRLISQNCSATVGQVGNVGVNRKSLGRAGSKRWLGKRPVVRGV 221
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RK2_CUSRE (50S ribosomal protein L2, plastid OS=Cuscuta reflexa GN=rpl2 PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 5.110e-36 Identity = 75/82 (91.46%), Postives = 79/82 (96.34%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HN+EIT GKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISK+CSATVGQVGNVG NQKSLGRAG++ WLGKRPVVRGV Sbjct: 140 HNLEITRGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKSCSATVGQVGNVGVNQKSLGRAGAQRWLGKRPVVRGV 221
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RK2_CUSGR (50S ribosomal protein L2, plastid OS=Cuscuta gronovii GN=rpl2 PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 2.374e-33 Identity = 68/82 (82.93%), Postives = 75/82 (91.46%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HN+EIT GKGGQLARAAGA AKLIAKEG+SATLKLPSGE+R ISK CSATVGQVGN+G NQKSLG+AG K WLGKRP+VRG+ Sbjct: 137 HNLEITRGKGGQLARAAGAAAKLIAKEGQSATLKLPSGELRFISKQCSATVGQVGNIGVNQKSLGKAGVKRWLGKRPIVRGL 218
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RK2_CYCTA (50S ribosomal protein L2, chloroplastic OS=Cycas taitungensis GN=rpl2 PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 2.624e-32 Identity = 67/82 (81.71%), Postives = 76/82 (92.68%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 H+IEITLGKGGQLARAAGAVA+LIAKEG+S TL+LPSGE+RLIS+NCSAT+GQVGNV AN +LG+AGSK WLGKRP VRGV Sbjct: 143 HSIEITLGKGGQLARAAGAVAELIAKEGRSTTLRLPSGEIRLISENCSATIGQVGNVNANNGTLGKAGSKRWLGKRPRVRGV 224 The following BLAST results are available for this feature:
BLAST of CX299948 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299948 ID=CX299948; Name=CX299948; organism=Citrus clementina; type=EST; length=249bpback to top |